Chyl019289.1
Basic Information
- Insect
- Cephonodes hylas
- Gene Symbol
- -
- Assembly
- GCA_030295005.1
- Location
- AP025382.1:9693623-9695749[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.6e-08 2.1e-05 24.6 0.0 2 35 9 41 8 47 0.87
Sequence Information
- Coding Sequence
- ATGGCGCCTAGAAAGCACTACAAACAAGAACAAATGAACAATGCTATAGAAGCAGTAAGACGTGGCCAGACTGTACTTGCAGCTGCTAGAAGGTTTGGTGTGCCTCGAATTAcattacgaaataaaataacaggAATAAGTCCCCTGGTATGCGGCATGGGCCCACCCTCAATCTTAACAAATCAACAGGAAAAGATCTTCGTGGAATGGATACATGAAATGTCCGACAAGCAATGCCCAGTCGGCAAAGATCACTTGCTAGACAGCGTCCAATATTTTGTAACACATGAAAATATAGTAAACCCATTCACAGATAACCGACCCGGCAAAAAATGGTACCATTCTTTTTCTAAGCGAAATTCAGAAGTGTCTGAGAGAATCTCCCAAAACTGGTGGAAAAGCAAAGAGAATATCACTGAAAAAAGAATTAGAACTTGGTATACAAATATGAAAAGATATTTGAAGTTAAATAATCTTGATGACATATTGAAGGATCCCCGTAGAATTTTCACTTCAGACGAAGCATCTTTCTTTTTGAACCCAAAGCACGATCGCGCGCTAGTCAAACGAAGtgaaacaaatacttattcGCTTATAGGGAATGAGAAAGAGAACCCCAAAGTATATTTAACAGCAAATGCAGCGGGAGAACTTGCTCCTCCTATGGTTTTGTACCCTTACCAGCGTGTGCCTACTTGCATTTCCGAGAGTATACCCGAAGAATGGGGAATTGGAAGATCCAAGATCGGGTGGATGTCTGCTAACAATCTTTACGAGTACATGACAGACATCTTTCATCCGTGGATAACGGAGAATAATATTAAGTTGCCAGTAATATATTTCCTGGACGGTGATGGTACACATCTATCGATGCATTTGTCTGAATTTTGTTCGAGTAATCAAATAGAACTCTTGTGCTTGTACCCCAATAGTAACCACTTATCAAAAACTATGGACGTGGCAATATTTCGACCACTTAAAGCATTTTGGAAAAGACAGTGTACTATATGGAAATTACGAAATTACGGTCAACAAATAAAACAGGAAAATTTTGCGCCAATTTTAGAAGAAGCGTTAAGTAACGTTACATCAGATTGTATAAGAAATGGATTTAAAGTGACTGGCATATTTCCTTTTACCCCTAAAAACATAGATTtcctaaaattaaattctgtttttcGAAGCAAAGTACTTAAACCACTACCATTTTTAAATACGTTAGAAAAAGAAATAGTGCAGCTTTTCACACGTGAAAAATTGGATCAATTTAATACGTTTTTTCATTTGAAAGGCCACAATTCTGAAAACGATTTACCTAAAGAAGATATAACATTGTATGCAATTTGGGCAAAATATAAGAGTGCGTGTCGCACCGTTACGTCAAATAATGTAAGCGAGGCGGCAAAACCGTCGATTTCTAAGTTTTTAGAACGATCTCGCTCTTCTAGTCCCGAATATGGTACTTCGACTCATAACGAAAGCTACATTAAAATCTGCCGAAGTCCACGTGTGGATGAAAATTGTTTAGAACAAGTTGAAAGTGACGATGAAAAACCATCGTATCTTAATTTGAGCCCAGAGAGCAGCGAAACCCCTACAAAACGTCCGCCGGCTTTTTTCCCGAGATTGTTCGAAGATGACAATGAAGACTTGAAGAATTATATTAGGAGGTTGAAAGAACCACCAATTACCACTAAATCGTGGCAAGACCACAATCAATTGGACGAAACAGAAATTCTACATAAAGTAATCAAACAAGAACCTctagaaattaaaagaaaaagagaTTTTGATACAAGTTATAGAcacaatattaatgaaaataaacaagcaATTAAGAGAAGAAAAATGTGTGTAAATTATGAAGATGCAGTAGATAAAGAAGAAAGCATTCCTGAATACTTTAGTAGAGATAATGAAAGCATCGATACTAAAGAATTACCAGACTTGAAAGGTCTTATCaagaaatatgaaacaaaagaaTCGATGGAAAAAGTGGAACTATCTATGGGTTTAGCAAAACCGAAAGAGGATGACGATAGCGTGATAATTTGTGtcactgatgatgatgttaagattattttttgtgatgAAAACTTAAGTGGTAATAAATCTGTTACTAAGTAA
- Protein Sequence
- MAPRKHYKQEQMNNAIEAVRRGQTVLAAARRFGVPRITLRNKITGISPLVCGMGPPSILTNQQEKIFVEWIHEMSDKQCPVGKDHLLDSVQYFVTHENIVNPFTDNRPGKKWYHSFSKRNSEVSERISQNWWKSKENITEKRIRTWYTNMKRYLKLNNLDDILKDPRRIFTSDEASFFLNPKHDRALVKRSETNTYSLIGNEKENPKVYLTANAAGELAPPMVLYPYQRVPTCISESIPEEWGIGRSKIGWMSANNLYEYMTDIFHPWITENNIKLPVIYFLDGDGTHLSMHLSEFCSSNQIELLCLYPNSNHLSKTMDVAIFRPLKAFWKRQCTIWKLRNYGQQIKQENFAPILEEALSNVTSDCIRNGFKVTGIFPFTPKNIDFLKLNSVFRSKVLKPLPFLNTLEKEIVQLFTREKLDQFNTFFHLKGHNSENDLPKEDITLYAIWAKYKSACRTVTSNNVSEAAKPSISKFLERSRSSSPEYGTSTHNESYIKICRSPRVDENCLEQVESDDEKPSYLNLSPESSETPTKRPPAFFPRLFEDDNEDLKNYIRRLKEPPITTKSWQDHNQLDETEILHKVIKQEPLEIKRKRDFDTSYRHNINENKQAIKRRKMCVNYEDAVDKEESIPEYFSRDNESIDTKELPDLKGLIKKYETKESMEKVELSMGLAKPKEDDDSVIICVTDDDVKIIFCDENLSGNKSVTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00787595;
- 90% Identity
- -
- 80% Identity
- -