Chyl006492.1
Basic Information
- Insect
- Cephonodes hylas
- Gene Symbol
- -
- Assembly
- GCA_030295005.1
- Location
- AP025365.1:14511623-14511940[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-13 9.3e-11 41.7 0.0 5 38 19 52 18 57 0.91
Sequence Information
- Coding Sequence
- ATGGTACGTtcatacaaaaagaaaactaaaagaGGAGAATGGTCAACAATTTCTATGAAAACAGCTATAGATAAAGTATTAAGTAAAGAAATGGGCTACAGAAAAGCCGCTTCTGAATACGGAGTGCCTCAGACTACTTTGGAGCgatatattaagaaaatgaaagaAGATGGTGAAGTTACAATTGGTGTACCTTTGGGCCCTAAAAAACCTATATTTACAACAAAAGAAGAAGACGAGATTGTGGCATATCTAAAACATAATATGGAAGAACGTCTTTTTGGGCTGACAACTCTCAATTTGAGACGTCTAGCATAG
- Protein Sequence
- MVRSYKKKTKRGEWSTISMKTAIDKVLSKEMGYRKAASEYGVPQTTLERYIKKMKEDGEVTIGVPLGPKKPIFTTKEEDEIVAYLKHNMEERLFGLTTLNLRRLA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00819988; iTF_01088047; iTF_01087988; iTF_00695430;
- 90% Identity
- iTF_00819988; iTF_00801727;
- 80% Identity
- -