Chyl012142.1
Basic Information
- Insect
- Cephonodes hylas
- Gene Symbol
- -
- Assembly
- GCA_030295005.1
- Location
- AP025373.1:586703-588211[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.014 5.2 7.3 0.0 30 45 31 47 30 47 0.93 2 2 7.4e-19 2.8e-16 59.4 0.1 1 42 54 96 54 99 0.95
Sequence Information
- Coding Sequence
- ATGGCCGGTGATGCGCGGGCGCCCCTGCGCCCCGCGCTTCCGTCCCCCTACTCCCCCCGGTCGATTGCGATGGCCAATCATTGCTTGGACAGGcGCACCCTTTACGGTCGGTGCAAGCGCGAGGGCATCGAGTTGTCTCGCTCCAACCCCACGCCGTGGTCCGAGACCGCCATGGTGGAGGCGCTGGAAGCTGTCAGgGTGGGTCAGATGTCCATCAACCAGGCGGCAATACATTACAATTTGCCGTATTCTTCACTGTACGGCAGGTTTAAGAGATGCAAGTATCAAAATCAGTTACAATCTACCCAGCAACAACAGCAACAAGATGTACAAAACCCGCAAGATGTCGACCAACAGTCGCAGCAACTATACTACCAGCAACTTCCCCCGTCCGTTTCGCAGCCGCCCGACGACGCCGCGCCGCTCTACCCGCAGTACCAACACAACGCGCACTACTCCGAGCCGCAGTACTACCACAACTTCACCAGTGTGCTCACCAGCTGA
- Protein Sequence
- MAGDARAPLRPALPSPYSPRSIAMANHCLDRRTLYGRCKREGIELSRSNPTPWSETAMVEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYQNQLQSTQQQQQQDVQNPQDVDQQSQQLYYQQLPPSVSQPPDDAAPLYPQYQHNAHYSEPQYYHNFTSVLTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -