Chyl012144.1
Basic Information
- Insect
- Cephonodes hylas
- Gene Symbol
- -
- Assembly
- GCA_030295005.1
- Location
- AP025373.1:594621-602360[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.7e-11 2.5e-08 33.9 0.0 4 39 175 211 172 215 0.89 2 3 3.5e-13 1.3e-10 41.2 0.2 1 39 226 264 226 268 0.95 3 3 5.7e-08 2.1e-05 24.5 0.2 2 32 282 312 281 313 0.95
Sequence Information
- Coding Sequence
- ATGCCGGGCGACGGCTTGTCCCGCGTTAAAAGCGAGCCACTGTCGGAGGAAGAAGACAGCAACTCATTTGTCCACAGTTATCTCTCTAATCAGGTGTGTTCAGAAGAATCGAATGTAGTTAAGTTTGGGACGGAATATCTGAGGAGTGAAAATGCCCCGTCGCACCTCATGCATCCTTTACATGGCTCCGGTCTGGAGGAGCTGGTCCCACTGGCGCCGGCGGGTCCCGCAGCCACCCCCGTCTGCGTGAAGCAGGAGCCCAGCGAGCCCGCGCCAGCACTCACCCTCGAGACACTCGAGCCCGCGCCGCACTCCGCTGAAGGTGCCGCTCTCATAGACAGACATTTAGCGTTACTGAACGCTAGCGATGTCCCCGATGAGTTTATGCCTCTAATCTCAGTGAAAGATGAACCACTCTCTGAAGGAGAACAGCAACAGTTAAGCAGCGAGGACACGAGTGACTCGTGCGGGACGCAGCCGGAGTCGTCGACGCGCGGCAGTCCCAAGAGTTGGACCCAGAAGGACATGGACAACGCGCTCGAGGCGCTGCGGAAACACAACATGAGCCTCACCAAGGCGTCTGCGACGTACGGCATTCCGTCGACGACGCTGTGGCAGCGCGCGCACCGGCTCGGCATCGACACGCCCAAGAAGGACGGCGCCGCCAAGTCCTGGACCGAGGACGACCTGCGCGCCGCCCTGCACGCGCTGCGGGCCGGCGCCATCTCCGCCAACAAGGCCAGCAAGGCTTACGGCATCCCGAGCAGCACGCTGTACAAGATCGCGCGGCGCGAGGGCATCCGTCTGTCGGCGCCGTTCAACGCCGCGCCCACCGCGTGGCGCCGCGCCGACCTGCAGCGCGCGCTCGCCTGCATCCGCGCCGGCGCCGCCACCGTGCAGCGCGCCGCCACCGCCTACGGCATCCCCACCGGTACGtacccccgcaccgagacactAACCGCCCTGCAAAACTAA
- Protein Sequence
- MPGDGLSRVKSEPLSEEEDSNSFVHSYLSNQVCSEESNVVKFGTEYLRSENAPSHLMHPLHGSGLEELVPLAPAGPAATPVCVKQEPSEPAPALTLETLEPAPHSAEGAALIDRHLALLNASDVPDEFMPLISVKDEPLSEGEQQQLSSEDTSDSCGTQPESSTRGSPKSWTQKDMDNALEALRKHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKDGAAKSWTEDDLRAALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLSAPFNAAPTAWRRADLQRALACIRAGAATVQRAATAYGIPTGTYPRTETLTALQN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -