Chyl009872.1
Basic Information
- Insect
- Cephonodes hylas
- Gene Symbol
- Mblk-1
- Assembly
- GCA_030295005.1
- Location
- AP025370.1:2130357-2141518[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-13 5.8e-11 42.3 0.0 1 38 124 162 124 166 0.93 2 2 2.4e-18 9.1e-16 57.7 0.0 1 43 329 372 329 374 0.95
Sequence Information
- Coding Sequence
- ATGCATCAAACGCCAATATTTGCTATACAAAGCGCACACACGTCGCACGAGCGAAGTTGTGGCACTATGGCATCACGGCTCGCCTTTTGTGAGGCCAGCACGGCCCGTCAGCGCCGATACCCATTGAGACACTTTTCGTTTATATACACGGCGCTCATGCCGACCGCGGAATCAGCAACGATACGGCTAGGCGAGGGCGGCGACAAGGCGGCGGGGCTGTCATCCCCCAGCCCGGCGGAGCAGCCGCTCGACCTCAGCGCTAAGTCCACCTCCAGCACCAGCGGCACGCCGCCGCCAGACGCCAAGCTCCTCGACAACAGGTTGAAGCGCGCGTGCGGCGAGCCGAACAGCGTGTCGCGGCGCACGTACACGGAGGACGAGCTGCAGCTGGCGCTGCGCGACATCCAGGCGGGGCGGCTGGGCACGCGGCGCGCGGCCGCGCTCTACGGCATCCCGCGCTCCACGCTGCGCAACAAGGTGACCAAGTTCGGGCCCGCCGAGCCGCCCGACTCGGAGCCCGACAGCGAGCCCGAGCGCGCCGACTCGCCGCCCTCCGTCATCCTCAAGATCCCCACGTTCCCGCCGCCCGACGACAAGAGCCCCTCgccggccgccgcgccgccgcccgccgcgcccgtcACGCCGCTGCTGCCCGCGCCGCCGCTGCAGCCCTCGCCCAGCCTGCTGCTGCCCGCCGTGTACGCCGACCCGCCCGCCTCGCAGCACATCTTCACCTCGCTCAACGACGTCATCGCCAAGAGCATCAGCCAGAAGTTCCAGCAGCCGCTCGACCGCGCGCACCAGCAGGACCTGCCCTTCCTGCGCGGGCCCGACGCGAGACACGTGTCCGTCATCAAAACGCAGCCAGACAACCAGCGCAACTACGCCATGCCGAGCAACTCCAAGGCGACCGCCAACAACAACGGCCAGCCCGCAACCGGCGGCAAGGGCACGCGGCCCAAGCGCGGCAAGTACCGCAACTACGACAGGGACAGCCTCGTGGAGGCGGTGAAGGCGGTGCAGCGCGGCGAGATGTCGGTGCACCGCGCCGGCTCCTACTACGGCGTGCCGCACTCCACGCTCGAGTACAAGGTGAAGGAGCGCCACCTCATGCGGCCGCGCAAACGCGAACCCAAGCCGCCGCAGGAGACCAAGCCGCAGCCGCCGAAGCCGCCGCCGCCGAAGCCGCCGTCGAAGCCGTTCTCGAACGGGATGAACGGGCCCGAGACGCCCGGCTACCCGCCCGGGTACCCGTTCTGGCCGGCGGGCGGGttcgcgccgccgcccgcgcccgacCTGTACGCGTCGCACATGATGCGGCGGCTGCGCGACGAGGCGCCGCCGCCCACCAACGGCTCGTTCCTGGAGGGCATCATCCGCTCGAGCCTGGAGCGGCCGGGCGCGGCGCTGCTGCAGCGGCTGACGGAGGGGCGCGCGCCCGACGCGCCCAGCCTGCTGCGGCGACTGACGGCCGAGCCGGACGagccgcccgcgcgccgcccgcgcctcgACACCTCCGACCACCAGCTGGCGGCCGAGATGCGCGAGGCGGTGCAGCGGCTGCGCGCCGACAAGCTGCGCCCGCGCAACGGCACGCcgacgccgcccgcgccgctgtcgccgcccgcgccccccgcgccgcccgccgcgccccccgaCCGCGCCTAG
- Protein Sequence
- MHQTPIFAIQSAHTSHERSCGTMASRLAFCEASTARQRRYPLRHFSFIYTALMPTAESATIRLGEGGDKAAGLSSPSPAEQPLDLSAKSTSSTSGTPPPDAKLLDNRLKRACGEPNSVSRRTYTEDELQLALRDIQAGRLGTRRAAALYGIPRSTLRNKVTKFGPAEPPDSEPDSEPERADSPPSVILKIPTFPPPDDKSPSPAAAPPPAAPVTPLLPAPPLQPSPSLLLPAVYADPPASQHIFTSLNDVIAKSISQKFQQPLDRAHQQDLPFLRGPDARHVSVIKTQPDNQRNYAMPSNSKATANNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQETKPQPPKPPPPKPPSKPFSNGMNGPETPGYPPGYPFWPAGGFAPPPAPDLYASHMMRRLRDEAPPPTNGSFLEGIIRSSLERPGAALLQRLTEGRAPDAPSLLRRLTAEPDEPPARRPRLDTSDHQLAAEMREAVQRLRADKLRPRNGTPTPPAPLSPPAPPAPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00341252;
- 90% Identity
- iTF_00787539;
- 80% Identity
- -