Basic Information

Gene Symbol
XBP1
Assembly
GCA_030295005.1
Location
AP025365.1:2627371-2629587[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 6.2 6.5e+03 -2.4 0.1 16 25 29 38 27 39 0.73
2 3 1.5e-18 1.6e-15 57.3 7.9 2 64 43 105 43 106 0.96
3 3 0.0023 2.4 8.7 0.4 35 55 90 110 89 115 0.87

Sequence Information

Coding Sequence
ATGAGTGCTCCAATCATAATAACGGTGCCGAACAACTATCTGATGGATGATGGAGACTCCAAAGTTATGGTCGACGTCGCGTCGCCGGCTCCATCACGGAAACGGCGGCTGGACCATCTGACATGGGAGGAAAAAATGCAAAGAAAGAAGTTGAAAAATCGCGTGGCAGCACAGACTTCCCGCGACAGAAAGAAGGCTAAAATGGATGAAATGGAAATTCAAATCAAGCATTTTAAGGATATTAACGAGAAACTGATTAGTGAAATTGAAAGCTTGAAGGCGTTGAATGAGCGATTATTAAGCGAGAACACGGCGCTTCGCAGCGAGGCCGCGACGCGGACCGTCTCGGATGCCCACGGACCAGCAGAGTCTACTCCTCAGCAGAAGGAGGGGCATCCGGCGGCGATCCGCGTGGCGCGCCTGCTGCTGGCGATGTGTCTCCTCTCGCAGACATCCTCGCTCACCTCGACTCCGACGAGTACCTGGACACGCTCCATCAACTTGCAGACTCCCTCCTCCAAGAAATTGATGCAGGTGCTGCAGGAGCGACTCAAGATGTCTCAGTCAGGGACGCTAGAGAGCGCCTTGAAGGAACTCAAGTGGTGGGGGCCGCAGCAGAGCAACTGGAATCCAGTGAAAGTCCTGTCGTAG
Protein Sequence
MSAPIIITVPNNYLMDDGDSKVMVDVASPAPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEIQIKHFKDINEKLISEIESLKALNERLLSENTALRSEAATRTVSDAHGPAESTPQQKEGHPAAIRVARLLLAMCLLSQTSSLTSTPTSTWTRSINLQTPSSKKLMQVLQERLKMSQSGTLESALKELKWWGPQQSNWNPVKVLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
90% Identity
iTF_01010107;
80% Identity
-