Ccan020498.1
Basic Information
- Insect
- Cenopis cana
- Gene Symbol
- stc
- Assembly
- GCA_951800055.1
- Location
- OX637482.1:18879998-18902167[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2 4e+04 -4.4 1.6 15 19 596 600 595 600 0.81 2 14 0.038 7.6e+02 1.4 1.5 2 10 628 636 628 636 0.93 3 14 0.00018 3.5 8.9 20.3 4 19 644 659 642 659 0.93 4 14 1.2e-07 0.0024 19.0 14.6 1 18 695 712 695 713 0.99 5 14 8.5e-05 1.7 9.9 12.5 1 18 754 771 754 772 0.97 6 14 1.1e-05 0.22 12.7 11.5 1 19 813 835 813 835 0.88 7 14 2 4e+04 -5.4 2.2 6 10 865 869 865 869 0.94 8 14 0.0047 94 4.3 6.8 1 11 875 885 875 886 0.94 9 14 0.16 3.2e+03 -0.6 0.5 4 10 890 896 889 898 0.92 10 14 2.8e-05 0.57 11.4 15.7 3 18 904 919 892 920 0.87 11 14 0.0013 25 6.1 13.2 8 18 965 975 959 976 0.79 12 14 6.1e-08 0.0012 19.9 15.3 1 17 1012 1028 1012 1036 0.90 13 14 0.00012 2.5 9.4 6.0 1 14 1042 1054 1042 1054 0.97 14 14 0.62 1.2e+04 -2.5 0.6 5 12 1088 1095 1084 1095 0.67
Sequence Information
- Coding Sequence
- ATGTCTCAGTGGAACAATTCTAACGCTTACAACCAATATCAGGGCTCTAATACCTGGAATGGTGAAGTAGATAATCAATATTCTAACCAACAGTACTACCCCGCTGATCAACGTACTTATGAACCAACCAATCAGTATGTAAATTTTCAAGAGTTTCTATCTCAAATGCAGAGTGGCGCTGGTGCGTCCAACTCTGCTTCATACAATCCTCAATACCAAAATTATTCTAACAATCAGTACGATTACCAAAACATGCCATCAACATCTCAGAATCATGCTCAAAATTCTTTCTATCCAACTACAAATGCTGTGAACGGACCAGACTACCAAACCACGCACACTCAAAATGCACCAGAACCTAGCTATAACAGTCAAATGGTGTTCAAATCTAATCTCACACCAACGGCCACCGAATTTGTGCCAAAGGCGACGTCTCAGAAGCAATCAAGTCCTCCAGAAGAATCTTCCAAGTATAATGGAGTGTCGGAAGCTAAGAGTGACCATACAGAAAGGAACTGGAGGGAAAAACCTTCTTCTCAACCAAGCAGTTCTCGTAACTACAATGAACCAAGAAATGATCAGGAATCAAAGAAAAGACCAGATAAAGACCGCAGGCGGCGTAATGAAGGTCGTAATAATTTAAGTAGTCAAAATGAAACTAATAGTCAAAATGATGATGGCGGAGAATATGAATCTAATACTTACAGTTACGAATCTAGCAAACATAATGCAGAGTACAGTAGTCGTAATTCAGAAGGCAGTAGTCGAAAATTCGAAAACAGGAACAGTCGTAGAAATGACTCTAGCCGTAATTATGAGGGAAGCAGTCGCAATAATGATTCCAATAGTTGTAACAATGAATCAAGCAGTAGAAATAATGATTCAGATCGTAAGTATGATTCTCAAGATCGGAACTATTCAAATAGGAATAATGACTCTGATAATCGTCACTATGACTCGGGTAGTCGTAACAACGACTCGAAAAAACGCAACTACGAATACAATAATCGTAACAATGATTCTAATAATCGCCAGTATGAGGGCAGTAGTCGAAATTACGATTCAAATAGTCGTAACTATGATAGTCGCGGTGATTCAGGCCGCAGCTCCGACTATCGTAGGAATGACTTTAATGGCCGCGACAGTGACTACAATAGTCGTAACAATGACTACAACAGTCGTAACAATGACTACAACAGTCGTAGCAGTGACTTCAACAGTCGTAGTGACTACAATGATAGTCGTAATGATTATAGTGCACGTAACCAGGACTATAGAGAATCGAACCGTTATGAAAGTAATAGAAGCAGTAAAAATTCCAAATCGAAGAGTAAAGAGGCTGACAATCGTACTTTTTACAATAGTACAGCCAAAAGTAGCCAGGACGTGAGGAGTGGCAGGGCAGAGAGAGGTGAAGCATCCGGCAGGAGTAGGAACTGGGCCGGGAGTCAACGCGTTCGACCAACGGAAAGAGCTGATGATGAACAGTTTGCAAAAGGTTATTTAGACAATCGCGAGGATCGGTACTCGAAGGGAAGACCTGAATCTATGTTCAGCCCTATGAGGAATAGAAATAGGCAAACAGATTTAACTGGAAACACGGACATGACCCAACGGGAGCGGCTCTCGGAGCAGCTGGATAAAGGGACCCTGGAATGTCTGGTGTGTTGCGAACGAGTGAAACAGATAGACCCGGTGTGGTCGTGCGGCAACTGCTACCATGTGCTGCACCTCCGCTGCATCAGGAAGTGGGCTATGAGCAGCAGTATAGAGGGCAAATGGCGATGCCCGGCCTGCCAGAACACGAGTTCGGATATACCCACGGAATACCGCTGCATGTGCGGCGCCGTTCGGAACCCGGACTACCAGCGAGGACAGCATGGCGCTCACACTTGTGGACAGGCATGTCAGCGGACCCGATCCTGCCCGCACCCGTGCACGCTGCCGTGTCATCCCGGCCCCTGCCCGCCTTGCCAGGCCACGGTTTCCAAGCAATGTGGCTGCGGCGCCGAAACTCGCTCCATCCTCTGCAGCAGTAAATTACCGCAAGTGTGCGGGCGAGTGTGCTCGCGCAAGTTAGAGTGCGGAGTGCATTCCTGCGAGAAGGAATGCCATGAGGGCGCGTGTGAGCCGTGCGGAGCCTCCGTCGAACAAGTGTGCTACTGCCCCGCGGCTAAGAGCCGCTCGGTGCCGTGCACTTTAGCCACCGGCAGCACCGTCCACTGGTCGTGCGACGCCGCGTGCGCGCGCGTGCTGGCGTGCGGCGCGCACGTGTGCCGCGCGCCGTGCCACGCGCCGCCCTGTGCGCCCTGTGAGCGCGGCCCAAACAGCGTGCTCACATGCCCATGCGGCCGGACCCGGATACCCAAGGACGCTCGCAAAACGTGCACGGATCCGATCCCGCTGTGCGGGAACATCTGCGCCAAGCCGTTACAATGCGGGCCCGCTGGCGACAGGCACTTCTGCAAGCTCGACTGCCACGAAGGTCCTTGTCCCGTGTGCCCGGACAAGACCCTAGTCCAGTGCCGCTGCGGGCACTCCAGCCGTGAAGTGCCCTGCTCGGAGCTGCCACAGATGTTAGACAACGTGTTCTGTCAGAAGAAGTGTAACAAGAAACTGTCATGCGGTCGGCACCGTTGCCGCGCGTCGTGCTGCGCGGCCACCACGCACCGCTGCGGCGTCGTGTGCGGCCGCCTGCTCGCCTGCCAGCTGCACCGCTGCGAGCAGTTCTGCCACACCGGACACTGCGCGCCCTGCGACCGAGCCAGTTTCGAGGAGCTAACCTGCGAGTGCGGGGCGGAGGTGATCCTGCCCCCGGTCCCTTGCGGTGCCAAGCGGCCCGCCTGCAGCGCGCCctgccgccgcccccgcccctGCGGACACCCCGCCCTCCACGCGTGCCACTCCGGACCCTGCCCGCCTTGTGTCGTGCTCACGGCCAAGCGGTGCCATGGCCGGCACGAGGAGCGCAAAACGATCCCGTGTTCGCAAGAAGAGTTCTCTTGCGGACTACCTTGCGGGAAACCGCTTCCTTGCGGGAAGCACTCCTGCCAGAAGATTTGCCACAAGGGACCTTGCGACCCGGGCAAATGCACTCAACCTTGCAACGAGAAGCGCCCCAGCTGCGGGCATCCGTGCGCTGCTCCCTGCCACGCGGGGGACAAGGACAAGCGGGACGGGGACAAGGGGGACAAGGTGGTGTGTCCCAGCAGCGCGCCGTGCCGCAAGCTCGTGCGCGCGCAGTGCCCGTGCGGCCGCCGCACCGCCGAGCGCTCATGTCACGAGAACGCGAGAGACCTGGCCAAAATAATGAGTGCACTTGCTGCCTCGAAAATGCAGGAAGGCGGTTCTGTGGACCTGTCGGAAGTACAACGCCCCGCGGCCATGCTTAAGACCCTTGAATGCGACGACGAATGCCGCGTGGAGGCCCGCACCCGGCGCCTCGCGCTCGCGCTCCAGATCCGCAACCCGGACGTGTCGGCCAAGCTGCAGCCGCGCTACAGCGACCACGTGCGGGCGCTGGCCGCCCGCGAGCCCGCCTTCGCGAGACAAGTGCACGACAAGCTCACCGAACTAGTGCAGCTGGCGAAGAAGTCGAAGCAGAAGACTCGAGCGCACTCATTCCCTTCGTGCAACTGGCAGAAGCGGCAGTTCATACACGAGATGTGCGAGCAGTTCGGTTGTGAGAGCGTCGCGTACGATGCCGAGCCGAACCGGAACGTCGTCGCCACGGCGGACAAGGAGAAGTCGTGGCTGCCGGCGATGAGCGTGCTAGAGGTGCTGGCGCGCGAGACCGGCAAGCGGCGCGTGCCCGGGCCCGTGCtgcgcgcgcccgccgccagcGCCAGCACCGCCGCCAGCGCTAGCGCCAGCGCCAGCGCCGCCAACAAGCCGGCGAGCGGGTGGGCGACGCTTACGTCAACGAACGCGTGGGCTGCGCGCGCGCAGAAACAAGAACAACAACAACAGGCGCGGCCCAAGATCGACTACTTCGACAACCCGCCCGACAATTAG
- Protein Sequence
- MSQWNNSNAYNQYQGSNTWNGEVDNQYSNQQYYPADQRTYEPTNQYVNFQEFLSQMQSGAGASNSASYNPQYQNYSNNQYDYQNMPSTSQNHAQNSFYPTTNAVNGPDYQTTHTQNAPEPSYNSQMVFKSNLTPTATEFVPKATSQKQSSPPEESSKYNGVSEAKSDHTERNWREKPSSQPSSSRNYNEPRNDQESKKRPDKDRRRRNEGRNNLSSQNETNSQNDDGGEYESNTYSYESSKHNAEYSSRNSEGSSRKFENRNSRRNDSSRNYEGSSRNNDSNSCNNESSSRNNDSDRKYDSQDRNYSNRNNDSDNRHYDSGSRNNDSKKRNYEYNNRNNDSNNRQYEGSSRNYDSNSRNYDSRGDSGRSSDYRRNDFNGRDSDYNSRNNDYNSRNNDYNSRSSDFNSRSDYNDSRNDYSARNQDYRESNRYESNRSSKNSKSKSKEADNRTFYNSTAKSSQDVRSGRAERGEASGRSRNWAGSQRVRPTERADDEQFAKGYLDNREDRYSKGRPESMFSPMRNRNRQTDLTGNTDMTQRERLSEQLDKGTLECLVCCERVKQIDPVWSCGNCYHVLHLRCIRKWAMSSSIEGKWRCPACQNTSSDIPTEYRCMCGAVRNPDYQRGQHGAHTCGQACQRTRSCPHPCTLPCHPGPCPPCQATVSKQCGCGAETRSILCSSKLPQVCGRVCSRKLECGVHSCEKECHEGACEPCGASVEQVCYCPAAKSRSVPCTLATGSTVHWSCDAACARVLACGAHVCRAPCHAPPCAPCERGPNSVLTCPCGRTRIPKDARKTCTDPIPLCGNICAKPLQCGPAGDRHFCKLDCHEGPCPVCPDKTLVQCRCGHSSREVPCSELPQMLDNVFCQKKCNKKLSCGRHRCRASCCAATTHRCGVVCGRLLACQLHRCEQFCHTGHCAPCDRASFEELTCECGAEVILPPVPCGAKRPACSAPCRRPRPCGHPALHACHSGPCPPCVVLTAKRCHGRHEERKTIPCSQEEFSCGLPCGKPLPCGKHSCQKICHKGPCDPGKCTQPCNEKRPSCGHPCAAPCHAGDKDKRDGDKGDKVVCPSSAPCRKLVRAQCPCGRRTAERSCHENARDLAKIMSALAASKMQEGGSVDLSEVQRPAAMLKTLECDDECRVEARTRRLALALQIRNPDVSAKLQPRYSDHVRALAAREPAFARQVHDKLTELVQLAKKSKQKTRAHSFPSCNWQKRQFIHEMCEQFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLARETGKRRVPGPVLRAPAASASTAASASASASAANKPASGWATLTSTNAWAARAQKQEQQQQARPKIDYFDNPPDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00655011;
- 90% Identity
- -
- 80% Identity
- -