Ccan005228.1
Basic Information
- Insect
- Cenopis cana
- Gene Symbol
- GATA-B
- Assembly
- GCA_951800055.1
- Location
- OX637471.1:24736408-24754804[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-18 1.7e-14 54.2 3.0 1 34 168 200 168 202 0.97 2 2 2e-18 8.8e-15 55.1 6.1 1 34 237 269 237 271 0.97
Sequence Information
- Coding Sequence
- ATGGGTGTGCGCCGGTCGGGTGGCGGCCCTCGGTACGCGGTGTCGGGTGGCGTGCGTGGTAAGCTGTGCACgggcggcggcggcggcgtttacTCTCGCTGTACCTACCCCGGCGGTGCGCCCTACTTCGGGAACGGCGCAGAGCTGACCTCGCAACCACAGATTTGGACCAGTGCAGGTGCGTCGCCGAGCTACGGCGGTTCGAGCGGCAGCGCGCCCGGCGCGGTCCTGGAGGAATACGGCgaaggcggcggcgcgggcgcagccGGCGCCGGAGGCTCGCCCGGCGCCGGTGGCACGTTGCCGTCCTTCAGCACCCGCTTCGGAACGCCCTTCGCATGTGCCACCTCTCGTCCTTCCACCGTCTATGGGACCACTGGTCTGCCCACCAACGCCTACGTGCACCAGGAGGTTTGGCTAGAAGGCAGCCGTCGCCAGTACTCCGCAGCCGCCAATCTATCAGCaaTCGAGATGGCGGAGATTTTCACGGAGGGGCGCGAGTGCGTGAACTGCGGCGCCATCGACACCCCGCTATGGCGGCGCGACGGCACCGGGCACTACTTGTGCAACGCATGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCCCAAGCAGCCCCGCCGGCTGGTACGTCAGCGGCACGCGGCGCACGCCATGCCCGCACCCGCCAACGACATGGGTACGAAGAGGCCAGGCCTGTCGTGTAGCAACTGCCACACGACGATGACGTCGCTATGGCGCCGCAACGCGCACGGTGAGACCGTATGCAACGCATGTGGCCTCTACTACAAGCTGCACAACATCAACCGCCCTATGGCCATGAAGAAGGACTCCATACAGACGAGAAAGCGGAAACCGAAGAACAGCCTGAAAGCGGAGCGGAACCTGAAGAGTTTAACCCAACACTCACACTCAACGGCAGTCAAAATGGAGGCTCTTTTGGATGCAGGGGCAGGCGTGGCGTCGACCGTCGGCGAGAGCAATCGGGGGCTCGCGCTGGGGTACTACGTGCAGCAGCAGCTGAAGCGCGAGGAGCCGCCGCCAGCGCACGGCGGCGCGCTGGCGCACGCGCACTCGCCCGCGCTGCTGCACCACGTGCACGCGCAGCAACTCTACGAGGAAGATTTCCGGCGCGCGCCCGACGCCGCCGACCGCCTCGACCGCCCCACCGTCGTATCCATCGGCAGCTGA
- Protein Sequence
- MGVRRSGGGPRYAVSGGVRGKLCTGGGGGVYSRCTYPGGAPYFGNGAELTSQPQIWTSAGASPSYGGSSGSAPGAVLEEYGEGGGAGAAGAGGSPGAGGTLPSFSTRFGTPFACATSRPSTVYGTTGLPTNAYVHQEVWLEGSRRQYSAAANLSAIEMAEIFTEGRECVNCGAIDTPLWRRDGTGHYLCNACGLYNKMNGMNRPPKQPRRLVRQRHAAHAMPAPANDMGTKRPGLSCSNCHTTMTSLWRRNAHGETVCNACGLYYKLHNINRPMAMKKDSIQTRKRKPKNSLKAERNLKSLTQHSHSTAVKMEALLDAGAGVASTVGESNRGLALGYYVQQQLKREEPPPAHGGALAHAHSPALLHHVHAQQLYEEDFRRAPDAADRLDRPTVVSIGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00773460;
- 90% Identity
- iTF_00658021; iTF_00656808; iTF_00659965; iTF_00654993;
- 80% Identity
- -