Ccan035870.1
Basic Information
- Insect
- Cenopis cana
- Gene Symbol
- znf711
- Assembly
- GCA_951800055.1
- Location
- OX637498.1:1426678-1454571[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.0067 0.52 12.0 1.8 1 23 872 894 872 894 0.98 2 10 0.087 6.7 8.5 3.5 2 23 902 923 901 923 0.97 3 10 2 1.6e+02 4.2 4.5 1 23 956 978 956 978 0.97 4 10 1.4e-05 0.0011 20.4 1.5 2 23 983 1004 982 1004 0.96 5 10 0.0081 0.62 11.8 1.7 1 23 1010 1032 1010 1032 0.97 6 10 0.11 8.7 8.1 1.6 2 21 1039 1058 1038 1063 0.92 7 10 0.11 8.8 8.1 0.3 1 19 1071 1089 1071 1094 0.80 8 10 0.036 2.8 9.7 0.4 2 23 1101 1125 1100 1125 0.94 9 10 6.3e-06 0.00049 21.5 1.5 1 23 1134 1156 1134 1156 0.98 10 10 0.38 29 6.5 1.8 1 23 1162 1185 1162 1185 0.93
Sequence Information
- Coding Sequence
- ATGCTCTTGTGGAGTGTTTGTTGGATTAGGTTTGGAGGAGCGGCGGAGCCGGCAGCGGAGCCCCCCAGCTCCGACAACGATGAGGTGCTCATCAAGGAAGAGCCGGCTGAGGTGGTGGAAATCAGCAGCGACGATGAGAAGCCAGATGTGGAGCGGCTAGCTAAGGAGATCGGAGCGACATCTCAAGAGAATGAAGCTGAAACGAATAAAAACAACGGTGACTCGCAAACGGTAACTAAAAGAATTAACGATTTAATCATAACAGTACCACAGTCGAAGCCGACGCGGAAAATAAAACTGAAACGGAGCAAGCCAACGGAAACTGTTACTAAAGAAGTAACTACTAGTAAAGCCGTTGAAACAGAAGCCGAAGTTAGTAATACTAGTAGTAATACTGTTACTACTAATGATAGAAACCCTGAACCAGAGCCTAAGAAAGGAAGTAATGTTGAAGTTAAAAGTAAAAGTAAGAAGagtaaaaagaaaaagaagaaagcAAAAGAGAAAGATGGTAGCGATGAAGATGAAATCACTATTCAGCTTTCTGATACAGAGAAAATGGATCTGCTTGAAGATTTAGATGCAAAGAACTTTGATACAGTTAGTTCCGGTGACTCGGATAGTTCTGATGAAGTTGAACAATCAATAAATGAAAACAAGAATTATGTACAATCTGTAGAGGATCAAGACAAAGTCGACACTAAAACTAATGAAACTAGCGAGGCGGAAGTAGAAGTTGTGGTCAATTCTGAAGGAAAGGATGTTGgaaaagatgaaataaaagGTTATGTGTCTAATGATAATGAAGGGACAATAGAAATAAATGATCTGCCTGTTGTCACGGATGATATTGTAAGTAACAGTAATGAGGTTATTTCTGAGATTAACGACAATTTTAAGGATCAATCTAGTAAATTGCCGGTCGATAACAAACTTAATGAAGCAGGATACGATGTTACTGAGACAAAGGAAAGTTCAAGTGAAGAAATGACAGACGATGCATGTGAAAAAAGCGGCGATAAAGCAAATTCAGTTGTTATTGAAACGGAAAAAAGTTCAAGTGAAGAAATGACAGACGATGCAAGTGAAAAAAGCGGAGATAAAGCGAATTCTGACGTTATTGACACAGAGAAAACTGTAATTGAAGACAAGACAGGCGGTGCAAATGAAAAAATCGACGATAAACCAGAGAGTTCTAATTTAGAAGGAAAATCTGATGGAGAAATATCTGACAGAGAGAGTTCCGAAGTCGAAGCTTCGGATGTACAACCGGAAGTAGTTTGTATATCCGACGACGACGgcaagaaaaagaagaaaaagaaaaaggaGAAGAAATCTAAGAAGGAAAAAAATAAGTCGGGTTTTCGTGAGGGTAGCGATGAGAATTTTTATAAGGATAAACAGGTAGAAGATTCTAGCAATTTAATAGAAACTAtagacgatgatgatgatgtctatGAATATCTAGAAATATCAGATGATTCCTCTTGCTACGAGGTTGAAGGGGTCTCAGTTTTATCAAAGGAGCCTACTGCCGAGGAAATAGAAGCGTTCTCCGCTAGGATGGATGCAATTGACTTAGATAAAGAAGAGACAGTGATACCGAATGAAGACATAACAGAAAAGCCAGATTTGAATGACGCtgaaattgaaaatatatcGTGGAAAGACAGATATCTAGGTAGCAAGAAGGTTAAAAGGGTATTAACCACGTCCAACATACTGAATGCTATTAGGAAGAAGAATAGAGAGTTGAAAAAGAAGTTAGAAGAAGCTAAGAAGGTAGAGCAAGAGAAAgaagaaataaaagaaacagaAGAGCCTGCAATTGAAGATGGTACTATGGAACAATATGAAACTCTGCAGGGCTCTACTAAATATGTGGATCCAGTCAAAGAAGTTGATACAACGGTCGAACAAAATGAAAATGACGCAACTGAACCGACAAAAGAAGATTCTAAAGAACAAAATGAGAATGTAACCAGGGAAATGAAGAAAGATGCCAAAATGCTGCTGAAAATGTATAAAAGGCTGCTTAAATATAATGATGTTAATAAGCAGAAGGATCCGaATGTGATTCAAGCTTTCTCTTCTAATATCTTCACAAAAGTTACTGAATCGGAGATACCTTATGAAATTGGtgtgaatgaaacaaaaaataatgcagaaaatgaAAGGCCAGTGTTTGTGAAGATTGAAGACGATTTTGACTTCGGTGAACATTTTGAAGACGAAAGTTTCGCCGATAAGGAggtgtataCTGAAGTCAAGACTGATGGTGTAACCGCACAAGAAACTGTCATTAACACTAAAAAAGCCAAGAGTAGAAAGAGAAAGAAGAGGAGGGAAGAGTTCGACGCGTCTGACGAGGAGCCACTCAAACCGAGTAAGAGAGAGGGGCACTCGGAAAAGGAAACTGTGGACAAGACGGTGAAGAAGCGTCGCAGTAAACGCGAGAAGCCGGCGGGGGTGGTGAACAACCCCCGGGTGGACCGGAACCTCGCGCAGCTGAACGTGAAGGACGGACAGATAGAAATGGTCGTGCTTAGCTGGGAGGAGGTGGAGGCGGAGCGGCAACGCGCGCGCGAGAGCGTAGTTTTCACGAGACACGAATACCGCTGCGAAGACTGCGTGCTCGGATTCAACCACCGGTTCAAACTGGACAACCACATGGCCAAACACTCTCCGTCGGCTGGTGCGTCCGAGTGTCCGGTGTGCCATGTGCGTTGTCGCGACGACCACGCGTTAGTGGCGCACAAGAGAAGACATCGGGTGCGATGGCGCTGTGTGTCGTGCGGCGAGCTGGCGTCGCGCGCGGCGGTGGCGGCCGAccacgcggcgcgcgcgcacggcgCCGCGCCCACACACACGTGCCGCCGCTGCGGGCTCACACACGAGTCGCTGGCGAAGCTGCGGAACCACATGAAGAACCACGCGGAGCGGCAGAAGTGCGAGCTTTGTGGGAAGACATTTAGGGATCGCACGTCGTTGAGGACACATCTGTTCATCCACCGCGGTGAGAAAGAGTATTCATGCCCTCACTGTGACAAGAAGTTCCTCTTCAAGAAGGCAATGGAAGTCCATTTAGTGACGCACGCGCAACCAGCGCGTCTTTACTGTTTAGAGTGCGATATGACTTTCAAGAACCGTATGTCGTACTACCAACATAAGAAATATAACTTGAAGCATATAGATCCCGCCAAACTTAAGTACAAATGTCCACTTTGTGACAAGAAATTCCTGAAGGCTGCCCGTTTGGAAGAACACAACTTCGCCGTTCATCTGAAAGTGACGCCAATACGTTGCACCATGCCTGAATGCGACTTCGCGTGTTCCTCCCGTCCCGTGCTGCGCACGCACATACGAATGGTGCACCGCAACCTGCGCGCCGTGCGCAACCACGTGTGCGACACGTGCGGCAAGGCGTACACGACGAAGAAGACCCTCGAAGGTCACATGAGGAGCCACACGGGCGAACGTCCATTCCACTGCACTCTCTGTTCTTCTACTTTCTCATACGAGGCAGCGCTATACAATCATAATAAACTGGTGCACCTTAAAGGCAAGGTGTCGCGGCGAGCGGACTGGGCACCTGGAGCGACTGTCACGTAG
- Protein Sequence
- MLLWSVCWIRFGGAAEPAAEPPSSDNDEVLIKEEPAEVVEISSDDEKPDVERLAKEIGATSQENEAETNKNNGDSQTVTKRINDLIITVPQSKPTRKIKLKRSKPTETVTKEVTTSKAVETEAEVSNTSSNTVTTNDRNPEPEPKKGSNVEVKSKSKKSKKKKKKAKEKDGSDEDEITIQLSDTEKMDLLEDLDAKNFDTVSSGDSDSSDEVEQSINENKNYVQSVEDQDKVDTKTNETSEAEVEVVVNSEGKDVGKDEIKGYVSNDNEGTIEINDLPVVTDDIVSNSNEVISEINDNFKDQSSKLPVDNKLNEAGYDVTETKESSSEEMTDDACEKSGDKANSVVIETEKSSSEEMTDDASEKSGDKANSDVIDTEKTVIEDKTGGANEKIDDKPESSNLEGKSDGEISDRESSEVEASDVQPEVVCISDDDGKKKKKKKKEKKSKKEKNKSGFREGSDENFYKDKQVEDSSNLIETIDDDDDVYEYLEISDDSSCYEVEGVSVLSKEPTAEEIEAFSARMDAIDLDKEETVIPNEDITEKPDLNDAEIENISWKDRYLGSKKVKRVLTTSNILNAIRKKNRELKKKLEEAKKVEQEKEEIKETEEPAIEDGTMEQYETLQGSTKYVDPVKEVDTTVEQNENDATEPTKEDSKEQNENVTREMKKDAKMLLKMYKRLLKYNDVNKQKDPNVIQAFSSNIFTKVTESEIPYEIGVNETKNNAENERPVFVKIEDDFDFGEHFEDESFADKEVYTEVKTDGVTAQETVINTKKAKSRKRKKRREEFDASDEEPLKPSKREGHSEKETVDKTVKKRRSKREKPAGVVNNPRVDRNLAQLNVKDGQIEMVVLSWEEVEAERQRARESVVFTRHEYRCEDCVLGFNHRFKLDNHMAKHSPSAGASECPVCHVRCRDDHALVAHKRRHRVRWRCVSCGELASRAAVAADHAARAHGAAPTHTCRRCGLTHESLAKLRNHMKNHAERQKCELCGKTFRDRTSLRTHLFIHRGEKEYSCPHCDKKFLFKKAMEVHLVTHAQPARLYCLECDMTFKNRMSYYQHKKYNLKHIDPAKLKYKCPLCDKKFLKAARLEEHNFAVHLKVTPIRCTMPECDFACSSRPVLRTHIRMVHRNLRAVRNHVCDTCGKAYTTKKTLEGHMRSHTGERPFHCTLCSSTFSYEAALYNHNKLVHLKGKVSRRADWAPGATVT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -