Basic Information

Insect: Cenopis cana
Gene Symbol: RREB1
Assembly: GCA_951800055.1
Location: OX637495.1:5091372-5107875[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 5.1 3.9e+02 2.9 1.2 1 12 95 106 95 118 0.86

2 12 2.9 2.2e+02 3.7 1.0 1 22 159 180 159 180 0.88

3 12 0.032 2.5 9.9 0.1 1 23 308 330 308 330 0.97

4 12 0.0017 0.13 13.9 0.4 1 23 339 361 339 361 0.99

5 12 0.0011 0.082 14.5 2.0 1 23 367 390 367 390 0.97

6 12 0.0043 0.33 12.6 1.6 1 23 733 756 733 756 0.96

7 12 0.00036 0.028 16.0 1.3 2 23 950 971 949 971 0.97

8 12 0.037 2.8 9.7 5.3 1 23 977 1000 977 1000 0.97

9 12 0.083 6.4 8.6 1.3 1 23 1031 1055 1031 1055 0.91

10 12 0.02 1.6 10.5 0.2 1 23 1077 1100 1077 1100 0.97

11 12 0.0027 0.2 13.3 0.2 2 23 1140 1161 1139 1161 0.96

12 12 0.041 3.2 9.5 5.3 1 23 1167 1189 1167 1189 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	5.1	3.9e+02	2.9	1.2	1	12	95	106	95	118	0.86
2	12	2.9	2.2e+02	3.7	1.0	1	22	159	180	159	180	0.88
3	12	0.032	2.5	9.9	0.1	1	23	308	330	308	330	0.97
4	12	0.0017	0.13	13.9	0.4	1	23	339	361	339	361	0.99
5	12	0.0011	0.082	14.5	2.0	1	23	367	390	367	390	0.97
6	12	0.0043	0.33	12.6	1.6	1	23	733	756	733	756	0.96
7	12	0.00036	0.028	16.0	1.3	2	23	950	971	949	971	0.97
8	12	0.037	2.8	9.7	5.3	1	23	977	1000	977	1000	0.97
9	12	0.083	6.4	8.6	1.3	1	23	1031	1055	1031	1055	0.91
10	12	0.02	1.6	10.5	0.2	1	23	1077	1100	1077	1100	0.97
11	12	0.0027	0.2	13.3	0.2	2	23	1140	1161	1139	1161	0.96
12	12	0.041	3.2	9.5	5.3	1	23	1167	1189	1167	1189	0.97

Sequence Information

Coding Sequence: ATGCAGGGAGCCGCCAGCGCGCCCGCGGCCCCAGCGGCCGAAACACCCCCATCCCAACAAATCAAAACAGAGGAGGTCATCAGTGAGGCGAAGATCGAGACAAATAACGAAGGGATGGAAGAAATGAGGGCGGAGAAACAAGAACCCCGAGTGACAAGGACAACAAGCATCGATAGCGATAATCGCTCGGACAGGAGCGAGGAAGAAGACTCGAGAAGAGCACGAAAACGAGCGGCGTCCACATCCCCGTCTCCAATGCCGCTGGATAAAAGATTCGCTCGATTCGAATGCCTGAAATGCGGCCAACGCTTCGAATCTGGAAACGCCTGCGATCTCCATCGCTTCACAGTCCACGGCGACGAAACCCGCGGCTTCAATGATCTCACCTTCGTCGATTTCTCCAGCAAGAAATACCCTGAAATAGCACGAGGAGTTTGCGAAAGAAACCCTCACGTGACGATCACAGAGCAGAGATACAGATGCGAGATGTGTTCCAGGGATTTCCCATGCAGACAGGCCTTAGACATACACAGGAAAACCTGCGCTGAGCCAGTCAGCGTGCAGAGTCCTGAACGAGTCGATCGCAGGGAAGACTTCTTCGCGAAACTCGACTTGAGAAACAGATACGGCATTCCCGGTACTCTAACGCCGCCTATGGAGCGGTTCACGCCTAAATTCGAAGACTCTCACTACACAGGCAACGGTATTCGTCATATTGATGCCGCGAGAGACTTGGCCGATATCCAGTCGATTTTAAACGTAACGTCTACTGGAAGCCTGCTAGAAAGACTAACCGGTACCAGAGTGCCTCTGGAAAGTTCTGTGTTGACCCCTCCCGATACAATCGGCAAGGAGAGAGAGCAAGAAGAAACACAAGACAACTTTGCTGCGGAGTTCAGACGAATGAAACTGCGGGGTGAGTTCCCTTGCCGATTGTGCCCTGCTAAATTCCCTAACCTTAGGGCTTTGAAAGGACACAACAGAGTTCACCTTAGTGGCACGGGGCCCGGACCTTATCAGTGCAACATGTGCCCTCACGCATCGCTGGACAAGGCGGCTTTGGTAAGACACATGCGAACACATAACGGTGATCGCCCGTACGAATGCGCTGTCTGCAACTACGCTTTTACTACCAAGGCGAACTGCGAACGGCATCTTCGGAATCGTCACGCCAAAGTCACCAGGGAAGACGTGAAGCGCTCAATCATTTACCATCCTTCAGAAGATCCTAACAATGACGAGGTCAATTCCAAGTTGGCGCGTGATGAAGTGAAGAGATCTCTAGCTTTCCATACGCCTGAGCCTGACAGGCGTCCTGAACCCACCGACCGTGACACCCCGCTGTCACACTTCACGCCTAGCTTCATCACCGATAGGCATCCAATCGCATCGTTGACCCCAAAACCGTTAGCGGACCTGCCTATCATCCCCAGGGATCCTGAGCCACCAACGCCTAGGATCAAAGTGAAAGGCATCGGACAGTTAACACAAATACCTGAATACAGACCGCCAGAATACCCGATTAAGAATAATGATGACGTTGAGAACTATGATGAAGAAACGCCAGTTGATCTCAGTACCAATGATAACTGTGACGTTCTTGATCTTAGCAAAAAGAAACGTGACGTGGAAGATGATGAGCCTAAAGCCAACTCCCGGCCGGCCTTCGAACCTGATCCAGCCGCAGTTGCCGCTTCCACTTTCGAAAAGACTCAGTTTCTTCTAGCCCAACAGAGACTTTTCGAAAATTCACTCCCCAAGATCGATCCGTCTTACTACGCTACCCAGCTATCGCAACTCTACGCCGGGGCCGTCCCGGGCTTACCTGGCCTTCCAGGCCTCCCGCCAACCTTTCCTATCAACCCCTACTTTCTTCAGCCCTCTTTTTTTCCCCACCCATCTGATTCCCAAGAACTGGCCGAAATAAAACAGCGTATCCAAAAAGAAATCATTCGTGGACTAAGCATGTCTGGCGGTCGGCTAGTGACCGGTGAGCAGGAGGCTCAACCTAAGCAGGAGCCCGAAGAAGATCAGCCTCAACGAGACAGCTCTCCGGTCCCACCTCCCCGCTCTGTGTCTCCGCCTCTGCCGTTGAACAACAGTCTGATTCAGCAGAACGATTCTGTCAAAATGGTGATCAAAAACGGTGTGCTAATGCCGAAGCAAAAGCAGCGGCGTTACAGGACTGAAAGACCTTTCTCTTGCTCGCAATGTTCCGCTCGCTTTACTTTACGCTCAAATATGGAACGTCACGTGAAACAGCAGCATCCGCAGCATTGGAGCGTGAGGCGGCCGGCGCCGAGAGCACCCCCACCTTACCCTTCCTCCGAATCTCTAGCTGACCGAGTCAAATACGCACTATTAGCTCGGCATCTTGAGCGACCGATTCCGCAAGATCGCTCACCGATCCGCCGCGACTCCGACGAGGTCGCAGACAACGAGGAAGACGAAGATGATACCCTAGTTATAGACGAAGAGCCCGAATCTGACGTCAAATCAGAGCAGCATCGCGCAGCGCATAGGGCTGCTGAGGAAATCCTAATGGCCTCACGACAACAAGAGTTGCACAAGGACTTTGATCTCAAAATCGCCGGGAACTTGATCAACAAGCCGCTCCCGATAGCCGAGAAGACTGAAACTGGCACTGACCCTATACCCGTGCCTGTGGAGCCGCTGATGGTGCCTGTTGTGCCAACAAGGAGCGACGAAGAGGAAGATGAAGAAGGCCTGGTAGCGTCTACGAGTGAAGGCAATAACTCCGGGAGTGATGAGAACAAGTCAGAGTCGGACACTGGCGCCCAGCCGCCCAAGAAGAAATCCGCCTACAGCCTGGCCCCGAACAGAGTCTCCTGCCCCTACTGCCATCGCAAGTTCCCCTGGTCCTCATCCCTCCGTCGCCACGTCCTCACTCACACCGGCCAGAAGCCCTTCAAATGTCCGCACTGTCCTCTACTCTTCACCACCAAATCCAACTGCGACCGTCACCTTTTAAGAAAGCATGGTGGATCCGCAAGAGCCATACTAGCTGAGCCTATCCCAGAAGCGGTATCCCCGCCCCAAAGCGACATCAGAACCGTCCCGGAAAGACCATTCAAATGTGCCTCATGCCCCACAAGCACTTTCTCCTCTCTGGACACTTTAAAAAAGCACATGTCCTCAAGACACGGAAGTGGTGACTCGCCTGCGTCTCCGAACCCAGAGGATGAAACCACGAATGGAGAGCTGGCATTCAAATGTCATTTATGTGAAGCATCGTTCGGTGACCGGGGCGGAGCGTTGAGGCATCTGGCGACAATGCATGCGGCGGAATACGATCAGCTGGTCAGCAAGGGAGCGTTGGACGCCGCAAGCGATAGGAGCGAAAGCGCGGATGATGATGAGAAGGCGAAGTTCCCGGACCACGCTAATAGAAAGGTGGTATGCGCCTTCTGCGTCCGTCGCTTCTGGTCAGCCGAGGATCTGCGCCGCCACATGAGAACCCATTCCGGCGAGCGCCCATTCGCCTGCGACCTCTGCCGACGTCGCTTCACGCTCAAACACAGCATGCTGCGGCATCGCAAGAAGCACAGGGACGAGACTGATGACGAAGAGGCCACGCCTGAAACTACTCCTCATGAGCCAGTCGGCAATGGATACAGCTACCACGACGAGGACGGGTCAGGCAACGAGGTCCCGAGCAACGTGAACAACAACAATTCTCCGCCATCCACGCATTACGACAAGCTTAAGATACAGATGACCTCGCGCAAATACTCCTCCGAGGCCGAAAACGACGGGGAAAATGGCGGCGATCTCATCGGAAAACTCCTCGGCATCCCTGACAAGACCATCATCAACAAGCTACTCTCATCCCCGGACGAAGCAGCGAAGTTCCTCGGAGTCAACAAATGA
Protein Sequence: MQGAASAPAAPAAETPPSQQIKTEEVISEAKIETNNEGMEEMRAEKQEPRVTRTTSIDSDNRSDRSEEEDSRRARKRAASTSPSPMPLDKRFARFECLKCGQRFESGNACDLHRFTVHGDETRGFNDLTFVDFSSKKYPEIARGVCERNPHVTITEQRYRCEMCSRDFPCRQALDIHRKTCAEPVSVQSPERVDRREDFFAKLDLRNRYGIPGTLTPPMERFTPKFEDSHYTGNGIRHIDAARDLADIQSILNVTSTGSLLERLTGTRVPLESSVLTPPDTIGKEREQEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKVTREDVKRSIIYHPSEDPNNDEVNSKLARDEVKRSLAFHTPEPDRRPEPTDRDTPLSHFTPSFITDRHPIASLTPKPLADLPIIPRDPEPPTPRIKVKGIGQLTQIPEYRPPEYPIKNNDDVENYDEETPVDLSTNDNCDVLDLSKKKRDVEDDEPKANSRPAFEPDPAAVAASTFEKTQFLLAQQRLFENSLPKIDPSYYATQLSQLYAGAVPGLPGLPGLPPTFPINPYFLQPSFFPHPSDSQELAEIKQRIQKEIIRGLSMSGGRLVTGEQEAQPKQEPEEDQPQRDSSPVPPPRSVSPPLPLNNSLIQQNDSVKMVIKNGVLMPKQKQRRYRTERPFSCSQCSARFTLRSNMERHVKQQHPQHWSVRRPAPRAPPPYPSSESLADRVKYALLARHLERPIPQDRSPIRRDSDEVADNEEDEDDTLVIDEEPESDVKSEQHRAAHRAAEEILMASRQQELHKDFDLKIAGNLINKPLPIAEKTETGTDPIPVPVEPLMVPVVPTRSDEEEDEEGLVASTSEGNNSGSDENKSESDTGAQPPKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHGGSARAILAEPIPEAVSPPQSDIRTVPERPFKCASCPTSTFSSLDTLKKHMSSRHGSGDSPASPNPEDETTNGELAFKCHLCEASFGDRGGALRHLATMHAAEYDQLVSKGALDAASDRSESADDDEKAKFPDHANRKVVCAFCVRRFWSAEDLRRHMRTHSGERPFACDLCRRRFTLKHSMLRHRKKHRDETDDEEATPETTPHEPVGNGYSYHDEDGSGNEVPSNVNNNNSPPSTHYDKLKIQMTSRKYSSEAENDGENGGDLIGKLLGIPDKTIINKLLSSPDEAAKFLGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00773242;
90% Identity: iTF_00773242;
80% Identity: -