Ccan036419.1
Basic Information
- Insect
- Cenopis cana
- Gene Symbol
- Znf131
- Assembly
- GCA_951800055.1
- Location
- OX637498.1:9046662-9061341[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0025 0.2 13.3 4.7 2 23 461 483 460 483 0.97 2 13 0.00029 0.022 16.3 0.8 2 23 492 514 492 514 0.94 3 13 0.14 11 7.9 0.6 3 21 527 545 525 546 0.92 4 13 0.14 11 7.9 0.1 3 23 559 580 557 580 0.92 5 13 0.11 8.8 8.1 0.4 1 23 585 608 585 608 0.95 6 13 2.6 2e+02 3.9 0.0 3 11 642 650 641 653 0.90 7 13 2.6 2e+02 3.9 0.0 3 11 715 723 714 726 0.90 8 13 2.6 2e+02 3.9 0.0 3 11 788 796 787 799 0.90 9 13 2.6 2e+02 3.9 0.0 3 11 861 869 860 872 0.90 10 13 0.0053 0.41 12.3 1.0 3 23 934 954 933 954 0.97 11 13 7.2e-05 0.0055 18.2 0.1 1 23 960 983 960 983 0.95 12 13 0.0034 0.27 12.9 1.0 1 23 989 1011 989 1011 0.97 13 13 5.3e-05 0.0041 18.6 1.2 1 23 1017 1040 1017 1040 0.95
Sequence Information
- Coding Sequence
- ATGAACTATCAGCTCAGTGCAAGCTACTGCAGGAGCCAGCGCAACGGCGGCGGCGTCTGTATCTACTCCGAGACCTCGCTACCCACACTGGAGCGGAAGGAGGTGGCAGCCCTTAGCGTGGAGATGAACCTCGAGGCGTGCGCGGCTGAATATATAGGTATAGGCGTGATCGTCGTTTGTATCTATAGACCTCCTCCTCAGTCAGCTGGATCGAGCGCCGAGCACCGAGCAGCGACCGCCGCCTCTGTGCTAAACCGGTTCTACGTCGATGCGAATAAGGACACCTGCGCTCGCCCCGACATCCCCGCTGCACTTCACTATCTCAGTAACCAGCAATATGCCTACCAACCCGGGAGATCAACGATCGACGCGGCGCGAGATGTTGTGACGAAAGTGACCGGCCACCTGGACGCCGGGCGGCAGGTCGCAGCCATATTCTGCGACCTTTCGCGCGCCTTCGAGCTGGTCAGCCATTCTCTCATTCTAGCGAAGTTAGACCACTATGGTGTCACTGGAAGCTTTCTCAAAACGATTGCTAACTTCTTAAAGTGTAGAAAACAACTAACTTCCGTGCGCGGAGTGAGATCTGATCTCCTGGAATTGGGTGATATTGCAGTTCCGCAGGGTTCCGTGATTggaaataatcttttttcaatattaatcaACGATTTCACAACCGCTACCGACGACGCGGAGATAGTGATCTTCGCCGATGACGGTTGTGTCATCGTGGCAGCCGAGAATCACCTTCTACTCAAAACCAAAATTACCAAAGTAATGGGACAAGTAGCAACGTGGTTTTCGGTCAACGGAATGATATTAAATGTCGATAAAACGAACATAGTTCATTTTTGCTTACGTGGTTCTAAGGAGCATGACCTACATGTCACTTGCAACGGACAAATAGTGCCGCAGGtcgaccaagtgaagtacttaggCCTCATAATTGATTCTGGTCTAACATGGAGTCCACACATAGATCAACTGTGTGACCGACTGTCATCCGCTTGCTTCGCCCTAAGTAGACTTCGCCCCAGCCTCAATCTTAATAACATTATGACTGCGTATTACGGCTATTTTCAGTCCATACTTACATACGGGATCGACCTATGGGGCGACGCTGCGGACCGACTAAGGCCATTCAGGATCCAAAAACGAGCGATTCGCTGCATATCTGGGGTCCCATGGGACTACCCTGCTCaggaattgtttaaaaaaactggtATTCTAACCCTACCGTGTCTATACATCTTCGAAGTAGCAAAATACGTAAGGCgcaatttaaaactgtttccTACTCGCAGTAATGCAAACTTAAGAAGTTACGGTGAACTATCGCATGCGGTGTTGCATGCGGGTATCCACGCCGGGACTACGCTCAAGTGCAGACACTGCGACAAGCAGTTCGTTAAGAAAACAACGCGAACGACACACATGCGTATGGCGCACCCGGTGGAGAACGCGGCCGGCGGTACCTGCGAGGTGTGCGGCGAGACGTTCACGAGCCGCCGCGGCCTGCGCAGCCACAAGGCGCGCACTCACAACAAGCAACTGCAGCCGACGGTGCCCGGTCTGTTCTGCCGGAAGTGCCGCGTACAGTTTGACAGTAAGGAGGCCCTCACACGACACAAGCAACTGCAGGAGGGACAGAGATGCAACAACGATCAGAGTGCGTGCGAGCAGTGCGGCGCGCTATATCCAACTGAAGACGAGTTGATACGCCACAAGCATCAAGCGCACGGCGTCCAACTCTTCACGTGTGATGCGTGCAACAAATCCTTCCTCTACAAACTGTCTCTATCTGTGCACATCGACCGCGTGCACCTGAACATCAAGCCGGTGCGGCCGAACCGTCCCAGGCCGGCCGGGGAGCGCAGGCCGGGCAAGCCCAAGCCGAAGCAGAAGTTCAAGCTGGACAACATGTGCGAGATCTGCGGGAAGGCGTATTCGCTTATTTATCTCGCCACGCCTCTACGACATGTGTATTCGGATCGTTCCTTCCTATTTGTGGTGTCTCTATCTGTGCACATCGACCGCGTGCACCTGAACATCAAGCCGGTGCGGCCGAACCGTCCGAGGCCGGCCGGGGAGCGCAGGCCGGGCAAGCCCAAGCCGAAGCAGAAGTTCAAGCTGGACAACATGTGCGAGATCTGCGGGAAGGCGTATTCGCTTATTTATCTCGCCGCGCCTCTACGACATGTGTATTCGGATCGTTCCTTCCTATCTGTGGTGTCTCTATCTGTGCACATCGACCGCGTGCACCTGAACATCAAGCCGGTGCGGCCGAACCGTCCCAGGCCGGCCGGGGAGCGCAGGCCGGGCAAGCCCAAGCCGAAGCAGAAGTTTAAGCTGGACAACATGTGCGAGATCTGCGGGAAGGCGTATTCGCTTATTTATCTCGCCGCGCCTCTACGACATGTGTATTCGGATCGTTCCTTCCTATCTGTGGTGTCTCTATCTGTGCACATCGACCGCGTGCACCTGAACATCAAGCCGGTGCGGCCGAACCGTCCGAGGCCGGCCGGGGAGCGCAGGCCGGGCAAGCCCAAGCCGAAGCAGAAGTTTAAGCTGGACAACATGTGCGAGATCTGCGGGAAGGCGTATTCGCTTATTTATCTCGCCGCGCCTCTACGACATGTGTATTCGGATCGTTCCTTCCTATCTGTGGTGTCTCTATATGTGCACATCGACCGCGTGCACCTGAACATCAAGCCGGTGCGGCCGAACCGTCCGAGGCCGGCCGGGGAGCGCAGGCCGGGCAAGCCCAAGCCGAAGCAGAAGTTCAAGCTGGACAACATGTGCGAGATCTGCGGGAAGGCGTATTCGTGCCTGGCGCTTCTGAAAACTCACCAAATGCGTCACACAGGAGATCGGCCCTTCAAGTGTACGGAGTGTCCGAAGGGATTCGTCACGGCGACACTGCTTCGGGAGCACAGAGACATCGTTCACGCGAGGCTCCGCAAATACACGTGTCCGCAATGCCCCAAGACTTTCCTACATCAGTCCTCCGTCTACGTGCATAGAGCTATCCACACGGGGGAGAAAGCTTACGAGTGCAGTTTCTGCGGGAAGGCGTTCACGCAAGCGGGGACTCTCCACACGCACGTCAAATTTGTTCATATGAAGGTCaaaccgccgccgcgccgccggaaCAAGCCGACATAA
- Protein Sequence
- MNYQLSASYCRSQRNGGGVCIYSETSLPTLERKEVAALSVEMNLEACAAEYIGIGVIVVCIYRPPPQSAGSSAEHRAATAASVLNRFYVDANKDTCARPDIPAALHYLSNQQYAYQPGRSTIDAARDVVTKVTGHLDAGRQVAAIFCDLSRAFELVSHSLILAKLDHYGVTGSFLKTIANFLKCRKQLTSVRGVRSDLLELGDIAVPQGSVIGNNLFSILINDFTTATDDAEIVIFADDGCVIVAAENHLLLKTKITKVMGQVATWFSVNGMILNVDKTNIVHFCLRGSKEHDLHVTCNGQIVPQVDQVKYLGLIIDSGLTWSPHIDQLCDRLSSACFALSRLRPSLNLNNIMTAYYGYFQSILTYGIDLWGDAADRLRPFRIQKRAIRCISGVPWDYPAQELFKKTGILTLPCLYIFEVAKYVRRNLKLFPTRSNANLRSYGELSHAVLHAGIHAGTTLKCRHCDKQFVKKTTRTTHMRMAHPVENAAGGTCEVCGETFTSRRGLRSHKARTHNKQLQPTVPGLFCRKCRVQFDSKEALTRHKQLQEGQRCNNDQSACEQCGALYPTEDELIRHKHQAHGVQLFTCDACNKSFLYKLSLSVHIDRVHLNIKPVRPNRPRPAGERRPGKPKPKQKFKLDNMCEICGKAYSLIYLATPLRHVYSDRSFLFVVSLSVHIDRVHLNIKPVRPNRPRPAGERRPGKPKPKQKFKLDNMCEICGKAYSLIYLAAPLRHVYSDRSFLSVVSLSVHIDRVHLNIKPVRPNRPRPAGERRPGKPKPKQKFKLDNMCEICGKAYSLIYLAAPLRHVYSDRSFLSVVSLSVHIDRVHLNIKPVRPNRPRPAGERRPGKPKPKQKFKLDNMCEICGKAYSLIYLAAPLRHVYSDRSFLSVVSLYVHIDRVHLNIKPVRPNRPRPAGERRPGKPKPKQKFKLDNMCEICGKAYSCLALLKTHQMRHTGDRPFKCTECPKGFVTATLLREHRDIVHARLRKYTCPQCPKTFLHQSSVYVHRAIHTGEKAYECSFCGKAFTQAGTLHTHVKFVHMKVKPPPRRRNKPT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -