Basic Information

Insect: Cenopis cana
Gene Symbol: -
Assembly: GCA_951800055.1
Location: OX637497.1:9485799-9487394[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.022 1.7 10.4 0.9 2 23 165 187 164 188 0.91

2 10 2.9 2.2e+02 3.7 1.2 1 23 193 215 193 215 0.92

3 10 0.0044 0.34 12.6 2.7 2 23 222 243 221 243 0.93

4 10 0.0015 0.11 14.1 0.7 1 20 248 267 248 269 0.92

5 10 3e-05 0.0023 19.4 0.6 2 23 290 311 289 311 0.97

6 10 3.6e-05 0.0028 19.1 4.3 1 23 318 340 318 340 0.97

7 10 6.8e-05 0.0052 18.3 0.7 1 23 346 368 346 368 0.96

8 10 8.7e-06 0.00067 21.1 2.1 1 23 374 396 374 396 0.98

9 10 8.4e-05 0.0064 18.0 1.8 1 23 402 424 402 424 0.97

10 10 2.2e-05 0.0017 19.8 2.1 1 23 430 453 430 453 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.022	1.7	10.4	0.9	2	23	165	187	164	188	0.91
2	10	2.9	2.2e+02	3.7	1.2	1	23	193	215	193	215	0.92
3	10	0.0044	0.34	12.6	2.7	2	23	222	243	221	243	0.93
4	10	0.0015	0.11	14.1	0.7	1	20	248	267	248	269	0.92
5	10	3e-05	0.0023	19.4	0.6	2	23	290	311	289	311	0.97
6	10	3.6e-05	0.0028	19.1	4.3	1	23	318	340	318	340	0.97
7	10	6.8e-05	0.0052	18.3	0.7	1	23	346	368	346	368	0.96
8	10	8.7e-06	0.00067	21.1	2.1	1	23	374	396	374	396	0.98
9	10	8.4e-05	0.0064	18.0	1.8	1	23	402	424	402	424	0.97
10	10	2.2e-05	0.0017	19.8	2.1	1	23	430	453	430	453	0.98

Sequence Information

Coding Sequence: ATGGAAAACGCTCATTGCCGGTTATGCGCCGAGTTGAAACCACTTGATAAGCTCATTGACTTGCAAACTGAGGCTGACAAGCGGGTTGAAATCGTGAAGAAGTTGAACAGGCTCAACGCAAGGACACTGGGGTTGTTTTCGGACGAAGTGCTGCCCAAAACGGTTTGTTTTGTGTGCGTGGGCTCGTTGGACAGAGCCTTTGAGTTTATAATGAACGTGGAACACGCCCAGGAGATGCTGAGCACCATTTTAGTGCGACAAGTTAAGAAGGAAGAGCTTTCCGACGACTCCGATGGAGGTGAGGCATTTTTGGAACAAGCGGAAGCCATAGCTAATAGTATTAAAGTTAAGCTCGAGATATTGGAGGGCGGACCCGTCTCGCTAGAGCAAGACGATCATAAGCGGAAGAAAAAGACCAAAACCACTAAATGCCGTAGTCTCGATTCCATACCTTTATCTCAACTTAAATTAACTTGGAAAGATTATTCTTGGGTATGTGCCTTCTGCGATACGCAGTACAAGTCCGCTGAAGAGTTAAAAACTCATTCCATGCAGTACCATCACTGCTGCAATGCCTTTAAATGTGGTGATTGCAACCTTAAAAAACAAAAGCTGGACAGTTTCTTAGTACATGTCAAGAGGCATAGACGTAACTTGAAACTGTCATGCTACGTGTGCCATAAGAGTTTCGCGAAGCTGAGTCAGATGAACAACCATAAAACCGAACATAGGACTACCGAGCACATCTGCAAGGGTTGTAATACTTGCTTTCCTAACTTGGAAGAGCTTAACGAACATACAAGCATATATTACAGGGAAAAGAAATCACGAGGCATCCCGATGGAGCTTGCTAACACAATCGATCTCACGTGTGTGATATGTAAGAAGGGATTTAAGAGCAAAGGCAGCTTGAGTTCGCATCTCTTAACTCATACGGACAGAAAACGGGACCACACATGCGAGAAGTGCGGTAAATGCTTCTTTAACAAGCAGAATCTGGCCGGCCATATGCTGCTGCATGACGATACAAGACCGTATAAATGCCAGATATGCAAGTTCAGCTTTAAAACTATAGGACAGCTACGGAATCATGTCGGAGTCCATGATGCGAATAAACCTTACTCCTGCGATCAGTGTGGACGATGTTTCCGGCTGCCAAAACAACTGAAATCCCATCAAATCGTACACACTGATGAACTCCCATACATCTGTTCATACTGCGGTAAGAGCTTCCGCTTTAAAACAATCTTAAACCAGCATGTCCGACAACACACTGGCCTAAAGCCATATTCATGCGGTTTCTGTCAACGGGACTTCACTAACTGGCCGAATTACAACAAACACATGAAGAGACGCCACGGCATGGACATGGCCAAGAAGAAGCATACACCAGAGGGCTTGTATCCGATCAATCCAGCGACCGGTGAGGTGGTTATCACACCGGAGACGATAGAGACAGTGGAGTGGAAGAAAGAGATGCTGAAGCAGCGGAGACCGGGACGTCCGAAGCAGGCGGAGCCGCTGGAGAGCCAGGAGCCACCGCAGATGGAGCCGATGAATTTTAAGAGTGAGAATATTGAGAGCCATACTCAATAG
Protein Sequence: MENAHCRLCAELKPLDKLIDLQTEADKRVEIVKKLNRLNARTLGLFSDEVLPKTVCFVCVGSLDRAFEFIMNVEHAQEMLSTILVRQVKKEELSDDSDGGEAFLEQAEAIANSIKVKLEILEGGPVSLEQDDHKRKKKTKTTKCRSLDSIPLSQLKLTWKDYSWVCAFCDTQYKSAEELKTHSMQYHHCCNAFKCGDCNLKKQKLDSFLVHVKRHRRNLKLSCYVCHKSFAKLSQMNNHKTEHRTTEHICKGCNTCFPNLEELNEHTSIYYREKKSRGIPMELANTIDLTCVICKKGFKSKGSLSSHLLTHTDRKRDHTCEKCGKCFFNKQNLAGHMLLHDDTRPYKCQICKFSFKTIGQLRNHVGVHDANKPYSCDQCGRCFRLPKQLKSHQIVHTDELPYICSYCGKSFRFKTILNQHVRQHTGLKPYSCGFCQRDFTNWPNYNKHMKRRHGMDMAKKKHTPEGLYPINPATGEVVITPETIETVEWKKEMLKQRRPGRPKQAEPLESQEPPQMEPMNFKSENIESHTQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00409589;
90% Identity: iTF_00659688;
80% Identity: -