Basic Information

Insect: Cenopis cana
Gene Symbol: -
Assembly: GCA_951800055.1
Location: OX637496.1:8753061-8758343[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 1.7 1.3e+02 4.4 2.8 1 23 76 99 76 99 0.94

2 21 0.011 0.85 11.3 3.1 1 23 165 187 165 187 0.96

3 21 7.4e-05 0.0057 18.2 1.5 1 23 191 213 191 213 0.98

4 21 0.0066 0.51 12.0 0.1 1 23 218 241 218 241 0.95

5 21 0.0012 0.096 14.3 2.7 1 23 247 270 247 270 0.98

6 21 0.021 1.6 10.4 1.6 1 23 277 300 277 300 0.95

7 21 0.00039 0.03 15.9 1.5 1 23 306 328 306 328 0.97

8 21 9.6e-06 0.00074 21.0 0.5 1 23 334 356 334 356 0.99

9 21 7.9e-06 0.00061 21.2 3.0 1 23 362 384 362 385 0.96

10 21 0.033 2.6 9.8 0.0 2 23 491 512 491 512 0.95

11 21 8.4e-05 0.0065 18.0 0.3 1 23 534 556 534 556 0.98

12 21 0.0014 0.11 14.1 1.6 1 21 560 580 560 581 0.94

13 21 0.0049 0.38 12.4 2.0 1 23 657 679 657 680 0.95

14 21 0.046 3.5 9.4 3.5 1 23 747 769 747 769 0.97

15 21 0.0069 0.53 12.0 0.9 3 23 775 795 774 795 0.97

16 21 0.0014 0.11 14.1 1.4 1 19 800 818 800 823 0.94

17 21 0.068 5.3 8.8 0.4 1 23 832 855 832 855 0.88

18 21 0.0024 0.19 13.4 0.6 1 23 862 885 862 885 0.97

19 21 0.00083 0.064 14.9 2.9 1 23 891 913 891 913 0.96

20 21 3.2e-06 0.00025 22.4 0.9 1 23 919 941 919 941 0.99

21 21 0.00021 0.016 16.8 4.6 1 23 947 969 947 970 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	1.7	1.3e+02	4.4	2.8	1	23	76	99	76	99	0.94
2	21	0.011	0.85	11.3	3.1	1	23	165	187	165	187	0.96
3	21	7.4e-05	0.0057	18.2	1.5	1	23	191	213	191	213	0.98
4	21	0.0066	0.51	12.0	0.1	1	23	218	241	218	241	0.95
5	21	0.0012	0.096	14.3	2.7	1	23	247	270	247	270	0.98
6	21	0.021	1.6	10.4	1.6	1	23	277	300	277	300	0.95
7	21	0.00039	0.03	15.9	1.5	1	23	306	328	306	328	0.97
8	21	9.6e-06	0.00074	21.0	0.5	1	23	334	356	334	356	0.99
9	21	7.9e-06	0.00061	21.2	3.0	1	23	362	384	362	385	0.96
10	21	0.033	2.6	9.8	0.0	2	23	491	512	491	512	0.95
11	21	8.4e-05	0.0065	18.0	0.3	1	23	534	556	534	556	0.98
12	21	0.0014	0.11	14.1	1.6	1	21	560	580	560	581	0.94
13	21	0.0049	0.38	12.4	2.0	1	23	657	679	657	680	0.95
14	21	0.046	3.5	9.4	3.5	1	23	747	769	747	769	0.97
15	21	0.0069	0.53	12.0	0.9	3	23	775	795	774	795	0.97
16	21	0.0014	0.11	14.1	1.4	1	19	800	818	800	823	0.94
17	21	0.068	5.3	8.8	0.4	1	23	832	855	832	855	0.88
18	21	0.0024	0.19	13.4	0.6	1	23	862	885	862	885	0.97
19	21	0.00083	0.064	14.9	2.9	1	23	891	913	891	913	0.96
20	21	3.2e-06	0.00025	22.4	0.9	1	23	919	941	919	941	0.99
21	21	0.00021	0.016	16.8	4.6	1	23	947	969	947	970	0.95

Sequence Information

Coding Sequence: ATGGACCTTCAAGAATCAGGACGGAAAGGTGAAGAGGTCGTTCAGGGTAAACCAGAATCCGCCCTTCAGGTCAAACAAGTGTTGGCCAAGGCAGAGGATATTAACGCTGCATCCGCAGCCGTCAAACGAGAGGAAGGCGAACGGAGACGAACCAACTTTAGGAATAATATCTCTACTATCATAGACTCAACCACCGTATATCCCTTTAAATATAGAAGAGGAATGTACCTCTGTTATTACTGCAAACACACGTTCCTAGAACCCGAAAAGCTGCGACAGCACAACCGTATCTACCATTCCGAATCAAAAGTACTACCGAAACCCAGAAAGTATGAACCGATTAAAATGGACTTCTCGACTGCTTTATGCAAGCTTTGCTTAACTGAAATTTGCGATTACGCCATGATGAAAACACATTTGATTGAACACGGCAAAGAACTAAACAACACTTTCGGAGATAGCGTACTTCCTTACAAGTTGAGCAGAGACGAGCACGTCTGTCAAGTTTGTGGGAAGACATACGAGATGTTTTTAAGCTTGCATAAACATATGAACGACCATTATGAGCATTATATTTGCGAGAAATGTGGGAAAAGATTCGCAACATCTCAACGTATGCTAAACCACACTCGAACCCACGAGCGCGGTGTGTTCCCATGCAAGCAATGCGACCAGACATTCCCATCCTACGCGCCTTTATACACGCATGTGGCAAAAGTTCATAGATTTAATAAGAGATACAAATGCCCCATTTGTAACGAAAAATTTGTGTCTTACAAACAGAGACTAAAGCATCTGCATACAGTTCACGAGCAGAAAACACCCGTTTTCCCTTGTCCATCGTGTGACCGAGTTTTTGATCTGTGCAGTAAGAGAACGGCACATATCAGATTCCAACACTTGCAGGAACGGAACCATGTGTGCAGCGTGTGTGGCATGAAGTTCTTTAGTAATTATGAGCTTCAAGAGCACACGATCAAGCATGGTGGCGAAAGGATATACCAATGCGACGTATGCAAGAAGGCGTACGCTAGAATAAAGACGCTCAGAGAACACATGCGGATCCATAACAACGACAGGCGATATACTTGTCCTGTGTGCGGACAAAGTTTTATTCAAAACTGTAGCATGAAACAGCATATAAGGGTGCATCATCCTACGCATATGAAAGATAAAAGCGAAGAGGCCAATCAGCCTAGAAAGGATTTGCCCGCAGCAGAAGATACTAAGGACTCCCAATGGCGCACCAATTTAAGGAACAATCTTTCTCTTATCGTAGATATGACTACAGTATACCCCTTCAAGTATTCTGCTAACCGACAAGGAGCATTGTTTCTCTGTTATTTTTGCACAGACACCTTCTTCACGCCAACGGAATTGCGAAACCACAGTTGCAATCAACATTCTAGGGTAGAAAACTTACCAAAGCTTAAAGGTTACCGACCCATAAAAATGGACTTCACAGCTGCATCATGTAAGATTTGTGGAGCTAAAATTCCCGACTATGCTATGCTGAAAGCCCATATGGCCGCTCATGGACACCCTCTGAACACGACGCGTGGAGATACCATCTACCCTTACAACCTGGGCTCCGAAGTATATATCTGCCAGATATGCAACACCATGTTTGATTCGTTTGTGTCTTTGATGAGACATATGATAGTACACTCTGATCGCCATATGTGCAATAAATGTGGAAAAAGGTTAAAATCTTACGCTCATCTCTTGACTCACATCAATTCAAATGAATGCGGCGCCTCGCCTGGTATCACTGAATTGAATGATCTTGATGACACTTGGGCCTCTAGTGAAGATAAGGCACCACAGAGGCAGTTAGAAGATCCTAGTGATGCTAAGTCAGCCGTTGAAGAAGATGTTGCTGAACAGAAGCGGTCCagttttagaaaaaatatattgactATAGTAACATCGACTACGGTATATCCATTTAGATACAAAAGAGGGTTATATCAATGTTTTTATTGCGACGAAACGTTTCTCAAACCAGAAGAGCTTCGACAACATAACCGTGCTCATCATTACGAAACAAAAGCATGTccaaaatttaaaatgtacGAGCCGGTGAAAATGGACTTCGTTGAGGCTACATGCAGGCTCTGCTTAGCTCAAATACATGACTATGCAACATTAAAAACACATCTAGCTGAACATAACAAAAACATAGACACGACGCATGGTGAGTTTGTGATCCCTTACGACTTAAAAAGTGATAATAAACACGTTTGTCAAATGTGCAAAAAAGCATACGAGTCGTTCTTGAGTTTACACAAACATATCAATGAGCATTTTGACGCAAACATATGTGATCAATGTGgcaagaaaaataaaacaaaccgCCAGCTGATTATTCATCGCCGTATTCACGAGCGCGGAGAGTTCCcttgcaaaaagtgcgacaaaACCTTTAACATCCTTTCTCACCTGTTTGCCCACGATGCCAAAGCACATAGAATCAACGTGGCAATCAATTCGTACAAATGCCCAGTTTGTAAAGAGAAATTCGCCAGTTATAGGGTTAGATTACAACATCTGGCCAAAGCGCATGGCTTCAAAACACCGGAGTTTCCTTGTCCCTCATGCGATAAAGTCTTCGACATGAGCAGTAGGAGGACCATGCATATAAAAACTCAGCACTTGAAACAAAGAAATCACGAATGTCAGTTGTGTGGCAATAAGTTTTCTACTCAAGCTGGCCTTAAACATCATCTGGTCAAACACGGCGGTGAAAGGATTTACCAGTGTGATATTTGCAAGAAAACTTATGCCAGGATAAAGACATTGAGGGAACACATGCGAATTCATAACGATGACAGACGATTCGCTTGTGCCGTGTGTGGGCTGACATTCATACAGAAGTGCAGTTTGAAACACCATTTGAGAGTACACCATCCTGAGCAGTTTAAACAAGAATTTGAATCTTGA
Protein Sequence: MDLQESGRKGEEVVQGKPESALQVKQVLAKAEDINAASAAVKREEGERRRTNFRNNISTIIDSTTVYPFKYRRGMYLCYYCKHTFLEPEKLRQHNRIYHSESKVLPKPRKYEPIKMDFSTALCKLCLTEICDYAMMKTHLIEHGKELNNTFGDSVLPYKLSRDEHVCQVCGKTYEMFLSLHKHMNDHYEHYICEKCGKRFATSQRMLNHTRTHERGVFPCKQCDQTFPSYAPLYTHVAKVHRFNKRYKCPICNEKFVSYKQRLKHLHTVHEQKTPVFPCPSCDRVFDLCSKRTAHIRFQHLQERNHVCSVCGMKFFSNYELQEHTIKHGGERIYQCDVCKKAYARIKTLREHMRIHNNDRRYTCPVCGQSFIQNCSMKQHIRVHHPTHMKDKSEEANQPRKDLPAAEDTKDSQWRTNLRNNLSLIVDMTTVYPFKYSANRQGALFLCYFCTDTFFTPTELRNHSCNQHSRVENLPKLKGYRPIKMDFTAASCKICGAKIPDYAMLKAHMAAHGHPLNTTRGDTIYPYNLGSEVYICQICNTMFDSFVSLMRHMIVHSDRHMCNKCGKRLKSYAHLLTHINSNECGASPGITELNDLDDTWASSEDKAPQRQLEDPSDAKSAVEEDVAEQKRSSFRKNILTIVTSTTVYPFRYKRGLYQCFYCDETFLKPEELRQHNRAHHYETKACPKFKMYEPVKMDFVEATCRLCLAQIHDYATLKTHLAEHNKNIDTTHGEFVIPYDLKSDNKHVCQMCKKAYESFLSLHKHINEHFDANICDQCGKKNKTNRQLIIHRRIHERGEFPCKKCDKTFNILSHLFAHDAKAHRINVAINSYKCPVCKEKFASYRVRLQHLAKAHGFKTPEFPCPSCDKVFDMSSRRTMHIKTQHLKQRNHECQLCGNKFSTQAGLKHHLVKHGGERIYQCDICKKTYARIKTLREHMRIHNDDRRFACAVCGLTFIQKCSLKHHLRVHHPEQFKQEFES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -