Basic Information

Insect: Cenopis cana
Gene Symbol: -
Assembly: GCA_951800055.1
Location: OX637497.1:10427120-10430952[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.021 1.6 10.4 0.0 3 21 118 136 116 137 0.93

2 15 5.7e-06 0.00044 21.7 1.2 1 23 154 176 154 176 0.97

3 15 0.00019 0.014 16.9 0.3 1 23 182 204 182 204 0.98

4 15 0.00077 0.059 15.0 3.8 1 23 210 233 210 233 0.92

5 15 0.005 0.38 12.4 2.9 1 23 241 263 241 263 0.97

6 15 1.3e-05 0.00099 20.6 0.7 1 23 269 291 269 291 0.98

7 15 3e-06 0.00023 22.5 2.0 1 23 297 319 297 319 0.99

8 15 0.00019 0.015 16.9 6.0 1 20 325 344 325 347 0.92

9 15 0.026 2 10.1 2.1 3 23 355 375 354 375 0.98

10 15 0.00016 0.012 17.1 1.0 1 23 381 403 381 403 0.97

11 15 6.4e-08 5e-06 27.8 1.6 1 23 409 431 409 431 0.98

12 15 0.0001 0.0079 17.7 3.5 1 23 437 459 437 459 0.98

13 15 0.0012 0.091 14.4 0.2 1 23 465 487 465 487 0.96

14 15 5.6e-05 0.0043 18.6 0.7 1 23 492 514 492 514 0.97

15 15 2.1e-05 0.0016 19.9 2.4 1 23 520 542 520 542 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.021	1.6	10.4	0.0	3	21	118	136	116	137	0.93
2	15	5.7e-06	0.00044	21.7	1.2	1	23	154	176	154	176	0.97
3	15	0.00019	0.014	16.9	0.3	1	23	182	204	182	204	0.98
4	15	0.00077	0.059	15.0	3.8	1	23	210	233	210	233	0.92
5	15	0.005	0.38	12.4	2.9	1	23	241	263	241	263	0.97
6	15	1.3e-05	0.00099	20.6	0.7	1	23	269	291	269	291	0.98
7	15	3e-06	0.00023	22.5	2.0	1	23	297	319	297	319	0.99
8	15	0.00019	0.015	16.9	6.0	1	20	325	344	325	347	0.92
9	15	0.026	2	10.1	2.1	3	23	355	375	354	375	0.98
10	15	0.00016	0.012	17.1	1.0	1	23	381	403	381	403	0.97
11	15	6.4e-08	5e-06	27.8	1.6	1	23	409	431	409	431	0.98
12	15	0.0001	0.0079	17.7	3.5	1	23	437	459	437	459	0.98
13	15	0.0012	0.091	14.4	0.2	1	23	465	487	465	487	0.96
14	15	5.6e-05	0.0043	18.6	0.7	1	23	492	514	492	514	0.97
15	15	2.1e-05	0.0016	19.9	2.4	1	23	520	542	520	542	0.98

Sequence Information

Coding Sequence: ATGGAGGGATGCAAGAAACAAGTAGTTATCAAGGAAGAGTGGGAGCTCCTGAGTGAGGAGGCAGCATGTGTGAAGGAAGAGCCTTCTTCGGAAGATGATGCAGGCTCGAGCGGAGTCAGTGAGGCGGCCGTGCTGGCGGGCTTGTACTCTGACCATGTGGTGAAGGATGAGCTTGTGCTGGGGCCGGAGGAAATGCATCGGCCTAACTCACATAATGCCTCGGCTGCCTAcaACTCGCCTTTAGGCTCACGGCGCGACCCGCGGCTCTCGCCCCGCGCCTGCTCCGTGCGGCTGGAGCGCTGCGTCCCCCCGCCCCCTCCCTCACCCGCGCCCGCCGACAACACTTACGGGTGCGACGCCTGTGGCGCAATATTTAAACGAAAATGGCCTCTAATACGTCATATTAACATGTACGGAAAATTCGATAGAAAGAAACATATTGAAATGGCAGAAAGATCGTACTCGTGCGAAATTTGTGAAAAGCggttcaaaaaatcaaaaagcctGAAGGCACACTTGTTGCTTCACTCGGGAGTAAAGTCTTACTCGTGTGACATATGTCAACGGCAGTTCGCTCAAGTATACGATTTAAAATTGCATACCCTGATCCATACAGGAGAGAAACCGCACTTCTGCGGGATTTGTAAAAAGAAATTCAGGCATATAAGCGCCTTAAATCGACATAAACAAGCAATTCATTCGACACCGACAGAAAGAATTTACCCATGCGAATTTTGTAAAAAGCGGTTTAAACAGTTATGTGTATTAAGGCAGCACGAACTAATTCACACAAGAGACAAGCTCTACTCGTGCAATATATGCCAAAAGAAGTTCGTGAGCTCATCCGGTGTGAAGCAGCATCAACTCGTGCACACGGGGGAGAAGCCTTACACTTGCGAGGTATGTAACAAGCGGTTCACGCAGCTCGTGCACTTAGTAACACACGCGCGGACTCACACTGGGGAGAGGCCTTACCTCTGCGAAATATGTAACAAGAGGTTTAAAAGTTCGTCTAATTTAAAGCATCATAAAATGTGTCATACTGGAGTAAGACCAAACTTTTGCGATATTTGTGAAAAGTGGTTTAAGGAATCGTGTAGTTTAACGATTCATAGACGCATCCACACGAATGAAAGACCTTACTCCTGCGAGATATGTAAAGCACAGTTTACTAGGCTGGAACATCTAAAACAACACGGACTCGTCCACTCGGGAGTAAAACCATACTCTTGTGATATATGTAAAAAGATGTTCACCCAATTGAGTAATTTAAGATCACATCAACGAGTCCACTTCGAGACAAGAGCGTACTCCTGTCAAATATGTTTTAAACAGTTCAAACAATCGCGCACTCTGAAGGACCATACAAGACTTCACAGCGGTGTTAAACCATACGCGTGTGATATTTGTAAGGAGGAATTCACGCTATTGAATAACTTAAAAGAACATAAAGAAATCCACAAGGCAAAGCCTTATTCCTGCGAGTTATGTAAGAAAGGGTTCACGCTAGCACAAAATTTGAAGCGACATAAAATTATTCACACGGGACTGAGGCCTTACTCCTGTGAGATATGTCAGGAAGAGTTCAGGCGACCAGAGTACTTGAACAAACATAAACACACGCATGTTAACCTGTAA
Protein Sequence: MEGCKKQVVIKEEWELLSEEAACVKEEPSSEDDAGSSGVSEAAVLAGLYSDHVVKDELVLGPEEMHRPNSHNASAAYNSPLGSRRDPRLSPRACSVRLERCVPPPPPSPAPADNTYGCDACGAIFKRKWPLIRHINMYGKFDRKKHIEMAERSYSCEICEKRFKKSKSLKAHLLLHSGVKSYSCDICQRQFAQVYDLKLHTLIHTGEKPHFCGICKKKFRHISALNRHKQAIHSTPTERIYPCEFCKKRFKQLCVLRQHELIHTRDKLYSCNICQKKFVSSSGVKQHQLVHTGEKPYTCEVCNKRFTQLVHLVTHARTHTGERPYLCEICNKRFKSSSNLKHHKMCHTGVRPNFCDICEKWFKESCSLTIHRRIHTNERPYSCEICKAQFTRLEHLKQHGLVHSGVKPYSCDICKKMFTQLSNLRSHQRVHFETRAYSCQICFKQFKQSRTLKDHTRLHSGVKPYACDICKEEFTLLNNLKEHKEIHKAKPYSCELCKKGFTLAQNLKRHKIIHTGLRPYSCEICQEEFRRPEYLNKHKHTHVNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -