Basic Information

Insect: Cenopis cana
Gene Symbol: -
Assembly: GCA_951800055.1
Location: OX637496.1:10241238-10252511[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.00086 0.066 14.8 0.7 1 23 182 204 182 204 0.98

2 21 0.11 8.1 8.2 2.7 1 23 210 232 210 232 0.92

3 21 0.002 0.15 13.7 6.6 1 23 238 260 238 260 0.98

4 21 0.0028 0.22 13.2 2.1 1 23 266 288 266 288 0.95

5 21 0.87 67 5.4 2.0 1 23 296 318 296 318 0.92

6 21 0.00011 0.0087 17.6 1.9 1 23 324 346 324 346 0.98

7 21 0.00016 0.013 17.1 0.4 3 23 354 374 353 374 0.97

8 21 6.5e-05 0.005 18.3 1.9 1 23 380 402 380 402 0.98

9 21 0.00054 0.042 15.4 1.9 1 23 408 430 408 430 0.98

10 21 1.5e-05 0.0012 20.3 2.6 1 23 436 458 436 458 0.96

11 21 7.7 5.9e+02 2.4 0.3 5 23 651 669 650 669 0.88

12 21 0.0028 0.22 13.2 5.4 1 23 675 697 675 697 0.98

13 21 0.0015 0.12 14.0 2.1 1 23 703 725 703 725 0.95

14 21 0.13 10 7.9 6.1 1 23 733 755 733 755 0.96

15 21 8.5e-05 0.0065 18.0 0.8 1 23 761 783 761 783 0.97

16 21 0.00013 0.01 17.4 3.0 1 23 794 816 794 816 0.96

17 21 0.0003 0.023 16.3 2.9 1 23 822 844 822 844 0.97

18 21 5.6e-06 0.00043 21.7 1.3 1 23 850 872 850 872 0.98

19 21 1.1e-05 0.00083 20.8 5.3 1 23 878 900 878 900 0.98

20 21 1.3e-05 0.00099 20.5 0.8 2 23 908 929 907 929 0.96

21 21 1.2e-07 9.1e-06 27.0 4.3 1 23 933 955 933 955 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.00086	0.066	14.8	0.7	1	23	182	204	182	204	0.98
2	21	0.11	8.1	8.2	2.7	1	23	210	232	210	232	0.92
3	21	0.002	0.15	13.7	6.6	1	23	238	260	238	260	0.98
4	21	0.0028	0.22	13.2	2.1	1	23	266	288	266	288	0.95
5	21	0.87	67	5.4	2.0	1	23	296	318	296	318	0.92
6	21	0.00011	0.0087	17.6	1.9	1	23	324	346	324	346	0.98
7	21	0.00016	0.013	17.1	0.4	3	23	354	374	353	374	0.97
8	21	6.5e-05	0.005	18.3	1.9	1	23	380	402	380	402	0.98
9	21	0.00054	0.042	15.4	1.9	1	23	408	430	408	430	0.98
10	21	1.5e-05	0.0012	20.3	2.6	1	23	436	458	436	458	0.96
11	21	7.7	5.9e+02	2.4	0.3	5	23	651	669	650	669	0.88
12	21	0.0028	0.22	13.2	5.4	1	23	675	697	675	697	0.98
13	21	0.0015	0.12	14.0	2.1	1	23	703	725	703	725	0.95
14	21	0.13	10	7.9	6.1	1	23	733	755	733	755	0.96
15	21	8.5e-05	0.0065	18.0	0.8	1	23	761	783	761	783	0.97
16	21	0.00013	0.01	17.4	3.0	1	23	794	816	794	816	0.96
17	21	0.0003	0.023	16.3	2.9	1	23	822	844	822	844	0.97
18	21	5.6e-06	0.00043	21.7	1.3	1	23	850	872	850	872	0.98
19	21	1.1e-05	0.00083	20.8	5.3	1	23	878	900	878	900	0.98
20	21	1.3e-05	0.00099	20.5	0.8	2	23	908	929	907	929	0.96
21	21	1.2e-07	9.1e-06	27.0	4.3	1	23	933	955	933	955	0.98

Sequence Information

Coding Sequence: ATGTCTCAAGAGGCTATAAAGGAGTCAGATTTGAACAAAGACCCACTTAACATGGAAACAGTTCTAGTTAAAGAGGAATTAAACAtcgaaacaatagaaacaacAGGACATGTTAAGGTTGAGATATATGTAAAACAGGAGCCGATAGAGGTAGAAATATCACAAAGACATGCAAACACAGAGGTGTGTATAAAGGAGGAACCTTGGGAGAGTGTGGGCGAGGCTGAAGGAGGAAGCTTGGGTGAAGATGGTCAGGCGCTCGGGTCGGAGTCAGTGCAGCATCCGAATGTGCCAATGGTGAATGtTGCATCATATGGAGAAGCTATGTCATTCAAAGAAAATCTCAGACAAAGTGTTACCGAAGCTATGTCAAAAACCGGCCATTCAAGCTGGGATACGATTGACACCAAAACGATGCTACAAATATCCAGGCTCTCTACTCACATGCAGGAAAACGCACTGTTGAGACGAACATTCAAGTTCAGAAAGAAGAAACAAAAAGTCACTGGCACTAGTAACGATGAGAATGAAAAAAACGAGAAATATATATGCGACGAGTGTAATAAAGAGTTTTCAATCAAGAAGCGTTTGATCGGTCATATGAAATACCATATGTACAAAAAGCCGTTCTATTGCACCATTTGCGATAAGAAATTTTCGTGTGAGACGTATGCGACTGTGCACGAGCGGATACACACCGGTGAGAAACCATACAGTTGCAACATCTGTCAGAAACAGTTCAGGTGTTCTAGCCATCTGGACAAGCACCAACGCATTCATACACACGATAAACCGCACTCTTGCGGAGTTTGTAACAAGCAATTTAGAGAAAAAACACAATTAAAGCTCCATGAGCTTCTACACAAAGGAGAGAAAGCTAAACAATATCCTTGTAAGTTCTGTCCAAAGAAGTTTCTACACGTGTATAAAGTAGCTCTACACGAGCGTTCTCACACTGGAGAGAGACCATACGTATGCACAACATGCGGCCAGAGCTATAAACAGAAGTTCCAACTTGACAGCCATACGCGATTACATACGGGACAGGAGCCACGTTTATGCGGAACGTGTGGAAAACATTTTGTAACCAAAGCGGACTTAGCTAGACACGAactaattcattcaaaaaataAACCATTCTCCTGTGACATATGCGAGCGGCAGTTTACACAAAAAGCCCACTTAAGCAGTCACAGACTCGTTCacactggtgagaaaccctttTCGTGCGACATGTGCCCGAAGAAGTTCAGTTGCAAAGCTTCATTGCGTATTCATGTACGAGTTCATACTAACGAGAGGCCGTTCGCTTGTAAAGTATGCGGGAGGTGCTTCAAACAGAGAGGGCAAATGAAAAGGCATCAGGTGATCCATCGTGAGATAGAGCCAGAACTAGTAATGGTTAAGGAAGAATTAGACATTGTAGAGAGAGGAATATGCGAGAAAAAGGAGGCattaggtgaagatgaagaGACAGGAATATGCCAGAAAAAGGAGGCGATAGGTGAAGATGAAGAGACAGGAATATGCGAGAAAGAGGAGGCAATAGGTGAAGATGAAGAGAAAGGAATATACGAGAAAAAGGAGGCAATAGGTGAAGAAACAATTTTACCAGACCATGTAAATGTGGAGGTGGTGTGTATAAAGGAAGAGGTCTGGGACAGTGTGAGCGCGGGTAAAGATGCAGGATTATACAGCGGACACGGGGTTGAAGAAGGTCTGGTTCTCGGGTCGGAGTCGTTGCAGCATCCAAATGTGTCAATAGAAAATGTTACATCATTTGGAGAAGCAACGACACTCAAAGACGAGATCAAACGAAGCGATACCAATATTGTGCCAACAACAGGTCATTCAAGCCGTAATACCATAGACAGTCAAATGATGCTTCAATTATCCGATATACAATATTTGTCCACTCAGGTGCATGGAAACGCACTACTGAGGAGAAGCATTTGTGATAAGAAATTCACGTGTGAGACGTACGCGACCGTGCACGCGCGGATACACACAGGTGAGAAACCGTACAGTTGCAACATCTGCCAGAAACCGTTCAGGTGTTCAAACCATCTGGACAAGCACCAACGCATTCACACACACGATAAACCGCACTCTTGCGGCATTTGTAACAAGCAATTTAGAGAAAAAACACAATTAAAGCTCCACGAGCTTCTACATAAAGGTGAGGAATCTAAACAACACGCTTGCAAATTCTGCCCAAAGAAGTTTCACCACGTGTACAAACTAGCTATACATGAACGTAGTCACACTGGGGAGAGACCATACGCCTGCACCACGTGCGGCGTCAGTTTCAAACAGAAGTTCCAACTTGCCAGCCATACACAATTGCACGCGGGAACTGTACACACGGGAAATAAACCACATGTGTGCGAAACGTGCGGGAAACATTTCTTTACTAAAGTGGACTTAACTAGACACGAACTCATCCACTCGAAAACCAAACCATTCTCCTGCGACGTTTGCGAGCGGCAGTTCACACAAAAAGCACACTTAATTAGTCACAAATTCACTCACACTGGCGAGAAACCCTATTCGTGCGACTTATGCACGAAGAAGTTTAGTTACAAAGGTTCATTGCGTATTCATCTACGAGTTCATACTAACGAGAGGCCGTTCGCTTGTAAAACATGCGGGAGGTGCTTCAAACAGAGAGGGCAAATGAAAACACATCAGCGGACCCATCGTGATAATGATAAACCTCTTATTTGTAAAGTGTGTAATGAGGAATTTACTATGAAAAGCGACTTAAAGAAACATCAGAAAATACATAAGTGGGCTCACAAGTGTGATGTTTGTGAAAAGAATTTTAGAGATAAATACAACTTGAACAGGCATATGCGGACGCATAGTGGGCAATCTGAGGAGAATGAACAAGTTAATGATGTGTTATCCGTGGAAATAGATTCGACTTAA
Protein Sequence: MSQEAIKESDLNKDPLNMETVLVKEELNIETIETTGHVKVEIYVKQEPIEVEISQRHANTEVCIKEEPWESVGEAEGGSLGEDGQALGSESVQHPNVPMVNVASYGEAMSFKENLRQSVTEAMSKTGHSSWDTIDTKTMLQISRLSTHMQENALLRRTFKFRKKKQKVTGTSNDENEKNEKYICDECNKEFSIKKRLIGHMKYHMYKKPFYCTICDKKFSCETYATVHERIHTGEKPYSCNICQKQFRCSSHLDKHQRIHTHDKPHSCGVCNKQFREKTQLKLHELLHKGEKAKQYPCKFCPKKFLHVYKVALHERSHTGERPYVCTTCGQSYKQKFQLDSHTRLHTGQEPRLCGTCGKHFVTKADLARHELIHSKNKPFSCDICERQFTQKAHLSSHRLVHTGEKPFSCDMCPKKFSCKASLRIHVRVHTNERPFACKVCGRCFKQRGQMKRHQVIHREIEPELVMVKEELDIVERGICEKKEALGEDEETGICQKKEAIGEDEETGICEKEEAIGEDEEKGIYEKKEAIGEETILPDHVNVEVVCIKEEVWDSVSAGKDAGLYSGHGVEEGLVLGSESLQHPNVSIENVTSFGEATTLKDEIKRSDTNIVPTTGHSSRNTIDSQMMLQLSDIQYLSTQVHGNALLRRSICDKKFTCETYATVHARIHTGEKPYSCNICQKPFRCSNHLDKHQRIHTHDKPHSCGICNKQFREKTQLKLHELLHKGEESKQHACKFCPKKFHHVYKLAIHERSHTGERPYACTTCGVSFKQKFQLASHTQLHAGTVHTGNKPHVCETCGKHFFTKVDLTRHELIHSKTKPFSCDVCERQFTQKAHLISHKFTHTGEKPYSCDLCTKKFSYKGSLRIHLRVHTNERPFACKTCGRCFKQRGQMKTHQRTHRDNDKPLICKVCNEEFTMKSDLKKHQKIHKWAHKCDVCEKNFRDKYNLNRHMRTHSGQSEENEQVNDVLSVEIDST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -