Ccan035630.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cenopis cana
Gene Symbol
-
Assembly
GCA_951800055.1
Location
OX637497.1:9103416-9116555[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 27 3.3e-06 0.00025 22.4 0.5 1 23 12 34 12 34 0.99
2 27 1.4e-06 0.0001 23.6 2.5 1 23 40 62 40 62 0.99
3 27 4.6e-05 0.0036 18.8 3.1 1 23 68 90 68 90 0.97
4 27 2.2e-06 0.00017 23.0 2.3 1 23 136 158 136 158 0.99
5 27 0.00076 0.058 15.0 1.4 1 23 164 186 164 186 0.96
6 27 0.0066 0.51 12.0 4.8 1 23 262 284 262 284 0.97
7 27 4.8 3.7e+02 3.0 2.4 2 21 292 310 291 312 0.83
8 27 1e-05 0.00077 20.9 1.4 1 23 318 340 318 340 0.98
9 27 2.4e-06 0.00018 22.9 4.2 1 23 351 373 351 373 0.99
10 27 8.9e-05 0.0069 17.9 0.1 1 23 385 407 385 407 0.98
11 27 1.1e-05 0.00085 20.8 4.3 1 23 413 435 413 435 0.98
12 27 6.4e-05 0.0049 18.4 0.2 1 23 496 518 496 518 0.98
13 27 2.6e-05 0.002 19.6 4.9 1 23 524 546 524 546 0.98
14 27 1e-06 7.7e-05 24.0 0.6 1 23 552 574 552 574 0.99
15 27 4.7e-06 0.00036 21.9 0.2 1 23 580 602 580 602 0.99
16 27 0.0094 0.73 11.5 3.3 1 23 608 630 608 630 0.95
17 27 0.0013 0.099 14.3 2.4 1 23 706 728 706 728 0.97
18 27 1.4 1.1e+02 4.7 4.3 2 21 752 770 751 772 0.85
19 27 1.9e-05 0.0014 20.0 0.1 1 23 778 800 778 800 0.98
20 27 1.3e-06 0.0001 23.7 5.4 1 23 806 828 806 828 0.99
21 27 3.8e-06 0.00029 22.2 0.4 1 23 834 856 834 856 0.99
22 27 2.5e-07 1.9e-05 25.9 0.8 1 23 862 884 862 884 0.99
23 27 0.00017 0.013 17.1 4.1 1 23 890 912 890 912 0.98
24 27 0.0063 0.49 12.1 4.8 1 23 991 1013 991 1013 0.97
25 27 8.1e-05 0.0062 18.0 0.7 1 23 1063 1085 1063 1085 0.98
26 27 2.9e-06 0.00023 22.6 4.2 1 23 1091 1113 1091 1113 0.99
27 27 2.6e-05 0.002 19.6 0.5 1 23 1119 1142 1119 1142 0.97

Sequence Information

Coding Sequence
ATGCACAAACGAATTCACACAGGCGAGAAACCTTATACATGTGGGGTTTGTAAAAAAGGGTTCACGCAGATCCCTAATTTAAAGTCACATATACGAACTCATACAGGAGAAAAGCCTTATGAATGTCCAATTTGTGAAAAGCGGTTTTCTCAATGGTGTTCTCTAGAAAAGCATAAACGGTCGCACACAGGCGACAAGCCATACTCTTGCGAAATATGTAAAAAGAAGTTTAGGCATTTAAGTACTTTAAATGCTCATAAATCTATCCACGCAGAAGTAAATGTGGGTAAGACGGGTGCGCGACACGGCCTGAATGATGAACTCGTGATTAAGGACCAGTTCGTCTTGGCGCCGGAGCCCATTCAGTGCCCCAAAATAGTCAATGCCGTAAATGGAGAAAAGCCTTATGAATGTCCAATTTGTGAAAAGCGGTTTACGCAATGGTGTTCCCTGGCAAAGCATAAACGGTCACACACAGGTGACAATCCATACTCTTGTGAAATATGTAAAGAGAAGTTTATGCATTTAAGTTCTTTAAAGGCTCATAAAGTTATCCACGCGGAAGAAAATGTGGGTATGACGGGTACGCGACACGGCCTGAATGATGACCTCTTAATTAAGGACCAGTTCGTTTTGGCGCCGGAGTGGCCCAAAATAGTCAATGCCGTTAACGagGAAAAGCGTGAAGATATCGAGAACGACATAGCGAGCCCTGGACTGAAAACTGTACCAGGATCTTATACTTTTACCGACTCGCTTAATTATGTTGAAAAGAAAAATACTCATGTGTGCGACTCGTGTGGAAAAACATTTCTACATAAACATGATCTAATAGACCATGTAAAAACTCACCAGCCGACCATTGAAAAAGTCTCCTGTAAAATATGCAATAAAAAGTACGGAAAAAGTTACATAAAGATTCACGAAAGATGTCACACAGGCGCCAAACCTTACTCCTGCGAAGTATGTAAAAAGAAGTTTGCTGATTTGGCCAATTTGAAACATCATGAACGTATCCACACTGATCCTCTTGATTCCAAAAAGAGGCCCTATTCGTGCGACGTATGCAAAAAGAGCTTCATTAGATCGGATCATCTAACGACGCACAAACGAACTCACTCTGGCGTTAAACCTTATACATGCGCCAAACCTTACTCCTGTGGAGTATGTAAAAAGGAGTTTGCTGTATGGGGCAGTTTAAAGGAACATAAACGTATCCACACCGAGGAGAGACCCTACTCGTGCGACGTATGCAAAAAAAGCTTCTCTAGATTGAATCACCTAAAGGTGCACAAACGAAGTCACACTGGCGAGAAACCTTATACATGTGGGACTCATAAAGTTATCCACGCGGAAGTAAATGTGGGTATGACTGGTGCGCGACACGGCCTGAATGATGACCTCGTGATTAAGGACCAGTTCGTTTTGGCGCCGGAGCCCATACAGTGCCCCAAAATAGTCAATGCCGTTAGCGGTGCCAAACCTTACTCCTGCGAAGTATGTAAAAAGGAGTTTACTATTTTGGGCAGTTTAAAGGAACATATACGTATCCACACCGAGGAGAGGCCCTACTCGTGCGACGTGTGCAAAAAGAGCTTCTCTAGATTGAATCACCTAAAGATGCACAAACGAAGTCACACTGGCGAGAAACCTTATACATGTGGGGTTTGTAAAAAAGGGTTCACGCAGATCTCTAATTTAAAGTCACATATACGAATTCATACAGGAGAAAAGCCTTATGAATGTCCAATTTGTGAAAAGCGGTTTGCACAAGGGAGTGCTCTAGAGACACATAAACGGACGCACACAGGTGACAAACCATAcctgtgtgaaatatgtaaaaAGAAGTTTATGTATGTAAGTTCGTTAAATACCCATAAATGTATCCACACGGAAGTAAATGTGGGTAAGACGGGTGCGCGACACTGCCTGAATGATGACGCCGTGATTAGGGACAAGTTCGTTTTGGGACCGGAACCCATACAGTGGCCCGAAATCGACAATGCCGTTAAAGagGAGTGTCGAGAGATCGAGATATCGAACCCTGAACTCAAAACTGTACGAGGATCTTATACTTTTACCGACTCGCTTCATCATATTGAGAAGAAAAATACGTACGTGTGCGACTCGTGTGGTAAAACATTTCTACATAAACATAATCTAATAGACCATGTAAAAGCTCACCAGCGGGAACACTTAGAATCATTGACAAAAGAGTCAAATTTATTTATCCGTGAATCCATTAAAAAAGTCTCCTGTAAATTATGCAATAAAAAGTTCAGAAAAAATTACATGAAGATTCACGAGCGATGTCACACAGGCGCCAAACCTTACGCCTGCGAAGTATGTAAAAAGGAGTTTGCTGATTTGGGCAATTTGAAGAATCATGAACGTATCCACACTGATGAGAGGCCCTATTCATGCGACGTATGCAAAAAGAGCTTCACTAGATCGGATCATCTAAAGACGCACAAACGAACTCACTCTGGCGATAAACCTTATACATGTGAGGTTTGTAAAAGAGGGTTCGCGCAGCTAACTAATTTAAAGTCACATATACGAATTCATACAGGAGAAAAGCCCTATGAATGTCCAATTTGTGAAAAGCGGTTTGCGCAAAGGAGTGCTCTAAAGACACATAAACGGACGCACACAGGTGACAAACCATACTCTTGTGAAATATGTAAAAAGAAGTTTAGGCAAGTAAGTTCGTTAAATACCCATAAATGTATCCACACGAAAGTAAATGTAGGTAAGACGGGTGCGCGACACGACCTGAATGATGACGCCGTGATTAAGGACAAGTTCATTTTGGGACCGGAACTCATACAGTGGCCCAAAATCGCCAATGCCGTTAACGagGAAAAGCGTGAAGAGATCGAGAACGAGATAGCGAGCCCTGGACTGAAAACTGTAATAGGATCTTATACTTTTACCGACTCGCTTCACTATGTTGAGAAGAAACATACTCATGTGTGCGAATCGTGTGGCAAAACATTTCTACATAAACATGATCTAATAGACCATGTAAAAACTCACCAGCCGGAAAACTCAGAATCATTGACAAAAGAGCCAAATTTATTTATCCGTGAACCCATTGAAAAAGTCTCCTGTAAAATATGCAATAAAAAGTACGGAAAAACTTACATAAAGATTCACGAGCGATGTCACACAGGCGCCAAACCTTACTCCTGCGAAGTATGTAAAAAGGAGTTTGCTGGTTTGGGCAATTTGAAACATCATGAACGTATCCACACTGAGGAGAGGCCCTATTCGTGCGACGTATGCAAAAAGACCTTCATTAGATCGGATCATCTAAACACGCACAAACGAACTCACTCTAGCGTTAAACCTTATACATGTGAGGTTTGTGAAAGAGGGTTCGCGCAGCTATTTAATTTAAAGAGACATACAAGACTCATTCATACGACAAAGGACTTATGA
Protein Sequence
MHKRIHTGEKPYTCGVCKKGFTQIPNLKSHIRTHTGEKPYECPICEKRFSQWCSLEKHKRSHTGDKPYSCEICKKKFRHLSTLNAHKSIHAEVNVGKTGARHGLNDELVIKDQFVLAPEPIQCPKIVNAVNGEKPYECPICEKRFTQWCSLAKHKRSHTGDNPYSCEICKEKFMHLSSLKAHKVIHAEENVGMTGTRHGLNDDLLIKDQFVLAPEWPKIVNAVNEEKREDIENDIASPGLKTVPGSYTFTDSLNYVEKKNTHVCDSCGKTFLHKHDLIDHVKTHQPTIEKVSCKICNKKYGKSYIKIHERCHTGAKPYSCEVCKKKFADLANLKHHERIHTDPLDSKKRPYSCDVCKKSFIRSDHLTTHKRTHSGVKPYTCAKPYSCGVCKKEFAVWGSLKEHKRIHTEERPYSCDVCKKSFSRLNHLKVHKRSHTGEKPYTCGTHKVIHAEVNVGMTGARHGLNDDLVIKDQFVLAPEPIQCPKIVNAVSGAKPYSCEVCKKEFTILGSLKEHIRIHTEERPYSCDVCKKSFSRLNHLKMHKRSHTGEKPYTCGVCKKGFTQISNLKSHIRIHTGEKPYECPICEKRFAQGSALETHKRTHTGDKPYLCEICKKKFMYVSSLNTHKCIHTEVNVGKTGARHCLNDDAVIRDKFVLGPEPIQWPEIDNAVKEECREIEISNPELKTVRGSYTFTDSLHHIEKKNTYVCDSCGKTFLHKHNLIDHVKAHQREHLESLTKESNLFIRESIKKVSCKLCNKKFRKNYMKIHERCHTGAKPYACEVCKKEFADLGNLKNHERIHTDERPYSCDVCKKSFTRSDHLKTHKRTHSGDKPYTCEVCKRGFAQLTNLKSHIRIHTGEKPYECPICEKRFAQRSALKTHKRTHTGDKPYSCEICKKKFRQVSSLNTHKCIHTKVNVGKTGARHDLNDDAVIKDKFILGPELIQWPKIANAVNEEKREEIENEIASPGLKTVIGSYTFTDSLHYVEKKHTHVCESCGKTFLHKHDLIDHVKTHQPENSESLTKEPNLFIREPIEKVSCKICNKKYGKTYIKIHERCHTGAKPYSCEVCKKEFAGLGNLKHHERIHTEERPYSCDVCKKTFIRSDHLNTHKRTHSSVKPYTCEVCERGFAQLFNLKRHTRLIHTTKDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-