Ccan022417.3
Basic Information
- Insect
- Cenopis cana
- Gene Symbol
- kn
- Assembly
- GCA_951800055.1
- Location
- OX637484.1:12953310-12961217[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-114 2e-110 371.0 0.0 218 387 2 189 1 194 0.99 2 2 1.3e-08 0.0001 21.9 8.5 420 511 198 295 190 371 0.63
Sequence Information
- Coding Sequence
- ATGGTCGACGGTCCACTCCTAGCGATATCGGACAACATGTTCGTCCACAACAACAGCAAACACGGCCGGCGCGCCAAGCGCCTTGATCCGACTGAAGGTATTGACGCCGCCACCGACACTACTTCGGGCCTGTACCCTCCACTGCCGGTGGCGACCCCGTGCATCAAAGCGATCTCGCCCAGCGAGGGCTGGACGTCGGGTGGCTCCACCGTCATCATCGTGGGGGACAACTTCTTCGATGGATTGCAGGTCGTTTTCGGAACGATGCTTGTTTGGAGTGAGCTTATAACCTCGCACGCGATCCGGGTGCAGACGCCGCCGCGGCACATTCCTGGCGTGGTGGAGGTCACGCTTTCATACAAGAGCAAGCAGTTCTGCAAGGGCGCGCCCGGAAGATTCGTCTATGTTTCAGCACTGAACGAGCCGACGATAGATTACGGGTTTCAGAGGCTCCAGAAGCTCATACCGAGACATCCTGGCGACCCGGAGAAGTTACCTAAGGAAATAATCCTAAAACGAGCCGCGGACCTAGCAGAAGCCTTATACTCCATGCCGCGGAACAACCAGCTTGGCTTGGGCGCACCCCGCTCCCCCCCAGCCAGCATGCCTTTCAACTCCTACACTGGCCAGTTGGCAGTCAGCGTGCAGGATACTGCGGCCTCGCAGTGGACTGAAgAGGAGTACGCGCGAAGCGGCGGTTCAGTGTCGCCGAGGTACTGCTCGGCCGCGTCCACCCCCCACGCCGCCTCCTACCCCCACCCGCAGCACTACCCAGCGCCGCCGACGTCCCTCTTCAACACCACATCGATGTCCCTGGGCCCGTATCATCCGGCGAACCTGAATGGACATTTATCATCTGACCATCACCACTATAACGCGTATAACACGAAAGATAGCGGGCATTACAGTGAAAGAAACGAGAATTCAAAAAGCTCGGCCGACTGTCCGGCAAACACTCATACAAAATGCACTGCGAGCGATATGAAAGGGCAGGAGAGTAAAGAGACTAAGCTAAGGAGCGCCTTTGCGGTCGTGAGGCAGAGAATGGGAGGATTAGTGTCATCGCCTTTTAGTGTAAATCCCTTCTCGCTGCCAACGTGTAGTGCGCAACAGTACGCGCAACAAGCGCAGCTCGCCTCCAAGTAA
- Protein Sequence
- MVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGIDAATDTTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAASYPHPQHYPAPPTSLFNTTSMSLGPYHPANLNGHLSSDHHHYNAYNTKDSGHYSERNENSKSSADCPANTHTKCTASDMKGQESKETKLRSAFAVVRQRMGGLVSSPFSVNPFSLPTCSAQQYAQQAQLASK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00036409;
- 90% Identity
- iTF_00176893;
- 80% Identity
- -