Ccan006275.1
Basic Information
- Insect
- Cenopis cana
- Gene Symbol
- JARID2
- Assembly
- GCA_951800055.1
- Location
- OX637471.1:44912626-44951578[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-17 5.8e-14 53.4 0.0 7 88 781 859 777 860 0.89
Sequence Information
- Coding Sequence
- ATGCTGCATAGACTGAAGTATATAGACATTGATTCGAACGGAGTTAGGCTAGTCCAGAGGAAGTTTGCGCAAGGGGTACCCATACCGGCCTGTAGCGGTAGCAACGCGCCGCCTCCTGAGAGGAAGGCAGAACCTCCGTACCCTCCCAAAAGTGTGTACCACAATAGCATGTCGGCGAGAAGCCTGTTGGACATCGTCTCTATGCAAAATATCCACAAACACAAACAAGAGCCCCTAGTTGTGCTGGAGCGGCTGCGAGACGACGAGATACCGTCGCCCTTGCCCAAGGTGCGGCGGATCAGGAAGCGGCGGGTCAAGCCGAATAAGAACAACATGTGCCTTAGGTCAGGGAAGCGAAAGTCGATCGACGTGGCTAAGGTAGTCGCCAAAAAACGGAAGAAGCTCTCTTCAGAGTCGACAGACGATGTACCGCTGATGTACTATTTCAACAGACCGAGCCAGGCCAAGCATAAGCCAAAGGATACAGATAAAAAGGATCGATCGTTAGACAGAGAGAAACGTACTCTGCCTCCAAAGAGGAGAGAGCGAACCGGCACACTTGGCTCCGAAAAATCTGCTTCAACGAGAGCAGAAACGATAATCCGATCGTTGAAGAAGGCCGGTGTCCCGTTGAACGGGCGCTGGTCGAGCCTAAGGTCCGCACGGGGCTCCGAGCCTCGCCTGGCGCGCCCCTTGCGCCCACAGGTGCTGATGGATGAGAAACGGCCATCGCTGTCGGCGCCCTCTGTTTCCGATTTTGATAGTGGTAACGATGCGACTCGCATCCCCTCACCAGCTAGCAGTTTGTTGGACGAGGTGAATCTCgggccgacgccgacgccgacgcctcCACTGATATACGACGTCGATAGCGAGTCGGCGACCGGACAACAAGACTGGTGTATCAATGAAAACGCTAACTTCAAGTCGAAGATTATGGACACGGATGTCATGACAATATTACGAACAGACAACCGAAGTTCGAGCATTACAGAGGGCACTACCGAGGAGGATCTAAACATTCTAGAACTGAAGGTCATGAGCGAAGCCACCGAGTTAGGAGAGACGAGCGAAAAAGCTAAAGAAAAGTCAAATTCAAAAGAAATCGGCGAAGAGAATGCGAAAGAGACAGGTAAAAAGGACAGAACGTGCAATTCAAAAGAAAGTATAGTTGGTGATAAGATTAATGTGAAACTGAAAGACGATTCAAAGGTTAGTAAAGATAACGAGAAGGGAGATAGCGAAGAGACAAATTCTGACGCTGAAAAGAGACTGACTAATGATTTGGATGCTGAAAAGAGACAGGAATCGCTCGTCGCTGACAGTAATAGGGAGAGTGAGaacaccaataaaaataatgtaaacgtAGCGAGTGTGGAGACTGACGTTGAAAATACAGAAGAGAGGCAGCGTGTTCAAGAAAGTCAGAAGCGGGGTGAGAAGAAGAAAGGTGTAAAAGCGAAGACGATCACTAAGAAGACTGTGGAGAATAATGTCACAAAGAAGAACAGCAAGAAACCAGCTACCAAAGCCGCCCCGAAAGAAACCAAGAAGACGAAGCCAAGGCGCGGCGCTAAGACTGTTCCAGAAGAGCCCCCGACATCAACGAGGCTTCTGAGAAACTCCCGCGAAACACAACCGCCACCGCCACCCAACCCGGACGTATACGAATTCGACGCGGAGCTCGAGGCCTCGCGACCCCCCTCGAGCCTCCGCCGGCGGGGCCAGCCCGCCGACGTGGCCCAACCCGCCCCCGAGCCACAGCCCCCGGCGCAGGAGCCGGCACAACCCGCCCCCACGCCGACTAGCCCAGAGAGCGAGTACCTCGACATACTGCCGAGTAGCTCGCTCTGCATAAAGATCACACCAAATAAACAAGAGGAGACCGGGGCAGAGTGTCCCAGCGTCCGGTTAGTTCCTAAAGAAGACATAAGcacaaagaagaagaagaatttgATAGAGAACCTGTCCAACAGTCCAGCGCTTCTCAACAAGTTCTTCAACTGTCTAACAGCTGAAATGCAGACGGAGTTAGACAACTTGATCGCAGCGGAGGGGTTGAACGAAGCGTCTACATCGAAGGAAGAGACGTATTTGGACCAGAAAGCGGGGTCTGTGTTTGAAGCGCCTACGTTCTACCCGACAGCAGAGGAATTTGAGGATCCGATAAAGTATTACGACAAAATCGCCCCCGAAGCCTCAAAATACGGACTCTGCAAGATAGTACCGCCTAAGGGCTTCAAGCCGCCCTGCAATATGAGCGACACCATTCGATTCGCCGTCATATACCAGTACATCTCCAAGATGTACAGCCGATGGGGCCCCGTGTCGAGAGAACTTGCTGCCATCAAGGCGCACCTCAGGACGCAGAGCGTAGTGTTCGCACGCTCCCCACTATTGGACGGCAGCGAAGTGAACCTCCCCAAGTTGTACCACGCCGTCGAGAGGAATGGGGGCCTCAGCAAAGTGATCCAGCGCAAGCGCTGGGGCCGCGTGGCCGACGAGATGAAGCTAACGAAGCTCCAGCACCCGGAGAGAAAGCTCGATCCTATATACATGCGGTATCTACTGCCGTATGCCACGCTCTCTGACCAGGAGCGACAAAACATAATGGCCGAAGTGGAGAAATGCTGGACCACCAAATACCAGAAGATGCTCGAGCGAGCGCGCAACCCGTTCCAGCGTCAGAACCGTATGCTGGGCACCGAGTGCGAATCCGAGTCCGATGATGAGAGCGAGGACGGCAACACGTGTGGAGCACTGCACGAGGCGGAGGACTGCATCGTGCAGGGCCGGACCATGAACCTGGTCACGTTCAAGAAGATCGCGACGTCTTTAATGGACGCTCACTTCGAGCCGACCAAGCAGCCGCCGACCGCCCTCGACGTCGAGAAGGCGTACTGGCGTGCTGTGCTGCTTGGCACTGAGCATATCGTGGCGAACACAGCATCGATAGACACAGGTGAAGAGGGCTACGGGTTTCCTAAGGACCCGGAGGCAGAGTACGGGACCCATCCGTGGAATCTGAAGGTGCTAGCGCGGAACCCAAACAACGTCCTCCGGTACCTCGGGGCGGTGCTCGGCGTCACCGTGCCCACCCTACACCTCAGCATGGTGTTCAGCACCTCCTGCTGGCACCGGGACCCGCACGGCCTACCCTGGACGGAGTACATGCACAGTGGCGCTGACAAGATCTGGTACGGGATCCCTCGAGACGAGAGCGCCAACTTCCGCCGCGCGGTCGAAACCCTCTGCCCCGCCTACTGCCAGAACAAGTCCATCTGGCTCGCCTCAGAAATCACCATGGTGCCACCAAACATCCTTAGCGAGCACGGCGTGAGACTGTCCAGGGTACTCCAGAGGCCTGGCGAATACGTGCTGGTGTTCCCTGAGGCGCACTCCTGCTCAATTACAACCGGCTTCGGGATTTCGGAGAGCGTGTACTTCGCTTCCAACGCCTGGTTGGCGAATGTTTACAAGCTGTTCCAAGAGCTGCGGAACAGCTGCGAGCCGACCATGTTTTCCCTCGAGCAGCTTCTCCTGAACGGCAGCGCGGACACGAGCGCGCCGCAGCAGGTGTGCTCGGTGCTGTGCACGCTGCTGAGCGCTGAGCTAGAGCACAGGCGAGCGCTCGAGCAGAGGGGACTCAAGGTGCAGGAGCGGCCCGCGTTGTCCGCGCCCCTCAACACGTCGTATTTCCGAGCGTGGAACACGCGCGACCAAGATGAGTGCGAATACTGTCGCTCCACTCTCTTCCTCTCTAAGGTGACCGGCCTAACTGGCCGCAAATCCGCCGTGTGCCCAGAGCACGCGTTCCGCCTGCTCGAAAcgaaaaaatacaagaacatcGAGCTGTCGTCGCTCGAGTTTGTCTCGTCGTACAGCACTAGCGCTCTCGAGGAGATGCTCGAGCGGCTCGAGTCTCGGACGGCGGAGGAGAGCAGCCGCGCGCCCTCGGTCATCGACCTCACGGGCCCGGAGCGGGGTTTGGAGAATAACACTCCGTAG
- Protein Sequence
- MLHRLKYIDIDSNGVRLVQRKFAQGVPIPACSGSNAPPPERKAEPPYPPKSVYHNSMSARSLLDIVSMQNIHKHKQEPLVVLERLRDDEIPSPLPKVRRIRKRRVKPNKNNMCLRSGKRKSIDVAKVVAKKRKKLSSESTDDVPLMYYFNRPSQAKHKPKDTDKKDRSLDREKRTLPPKRRERTGTLGSEKSASTRAETIIRSLKKAGVPLNGRWSSLRSARGSEPRLARPLRPQVLMDEKRPSLSAPSVSDFDSGNDATRIPSPASSLLDEVNLGPTPTPTPPLIYDVDSESATGQQDWCINENANFKSKIMDTDVMTILRTDNRSSSITEGTTEEDLNILELKVMSEATELGETSEKAKEKSNSKEIGEENAKETGKKDRTCNSKESIVGDKINVKLKDDSKVSKDNEKGDSEETNSDAEKRLTNDLDAEKRQESLVADSNRESENTNKNNVNVASVETDVENTEERQRVQESQKRGEKKKGVKAKTITKKTVENNVTKKNSKKPATKAAPKETKKTKPRRGAKTVPEEPPTSTRLLRNSRETQPPPPPNPDVYEFDAELEASRPPSSLRRRGQPADVAQPAPEPQPPAQEPAQPAPTPTSPESEYLDILPSSSLCIKITPNKQEETGAECPSVRLVPKEDISTKKKKNLIENLSNSPALLNKFFNCLTAEMQTELDNLIAAEGLNEASTSKEETYLDQKAGSVFEAPTFYPTAEEFEDPIKYYDKIAPEASKYGLCKIVPPKGFKPPCNMSDTIRFAVIYQYISKMYSRWGPVSRELAAIKAHLRTQSVVFARSPLLDGSEVNLPKLYHAVERNGGLSKVIQRKRWGRVADEMKLTKLQHPERKLDPIYMRYLLPYATLSDQERQNIMAEVEKCWTTKYQKMLERARNPFQRQNRMLGTECESESDDESEDGNTCGALHEAEDCIVQGRTMNLVTFKKIATSLMDAHFEPTKQPPTALDVEKAYWRAVLLGTEHIVANTASIDTGEEGYGFPKDPEAEYGTHPWNLKVLARNPNNVLRYLGAVLGVTVPTLHLSMVFSTSCWHRDPHGLPWTEYMHSGADKIWYGIPRDESANFRRAVETLCPAYCQNKSIWLASEITMVPPNILSEHGVRLSRVLQRPGEYVLVFPEAHSCSITTGFGISESVYFASNAWLANVYKLFQELRNSCEPTMFSLEQLLLNGSADTSAPQQVCSVLCTLLSAELEHRRALEQRGLKVQERPALSAPLNTSYFRAWNTRDQDECEYCRSTLFLSKVTGLTGRKSAVCPEHAFRLLETKKYKNIELSSLEFVSSYSTSALEEMLERLESRTAEESSRAPSVIDLTGPERGLENNTP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -