Basic Information

Insect: Celastrina argiolus
Gene Symbol: salm
Assembly: GCA_905187575.1
Location: LR994597.1:696352-708485[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.092 9.5 7.5 0.8 1 15 356 370 356 378 0.84

2 10 0.00013 0.014 16.5 3.2 1 23 385 408 385 408 0.96

3 10 0.016 1.6 9.9 2.0 1 23 439 462 439 462 0.97

4 10 0.0034 0.35 12.1 0.3 1 23 466 489 466 489 0.93

5 10 0.044 4.6 8.5 0.2 2 20 502 520 502 522 0.93

6 10 0.13 13 7.1 0.1 2 23 575 597 574 597 0.95

7 10 0.0026 0.27 12.4 2.5 2 23 613 634 612 634 0.96

8 10 3.5e-07 3.6e-05 24.6 0.4 1 23 640 662 640 662 0.99

9 10 0.19 20 6.6 6.8 1 23 669 692 669 692 0.98

10 10 0.00022 0.022 15.8 0.2 1 23 698 721 698 721 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.092	9.5	7.5	0.8	1	15	356	370	356	378	0.84
2	10	0.00013	0.014	16.5	3.2	1	23	385	408	385	408	0.96
3	10	0.016	1.6	9.9	2.0	1	23	439	462	439	462	0.97
4	10	0.0034	0.35	12.1	0.3	1	23	466	489	466	489	0.93
5	10	0.044	4.6	8.5	0.2	2	20	502	520	502	522	0.93
6	10	0.13	13	7.1	0.1	2	23	575	597	574	597	0.95
7	10	0.0026	0.27	12.4	2.5	2	23	613	634	612	634	0.96
8	10	3.5e-07	3.6e-05	24.6	0.4	1	23	640	662	640	662	0.99
9	10	0.19	20	6.6	6.8	1	23	669	692	669	692	0.98
10	10	0.00022	0.022	15.8	0.2	1	23	698	721	698	721	0.91

Sequence Information

Coding Sequence: ATGAGTTGTTGTATATTTACCTGCGTTAACAGTGAAACATCTAGTGCACCATATGAAGATGTTACCTTTTACAAAATACCTAAGGAGTACCAATTGAAACAATTATGGACTGAAGCTATTGGTATTCCTGAGTGGCAGCTAAGACCTAACAGTGAAGTATGCTCTGCTCATTTTCAAGAGCACGACTTTACAATCTCGGAGACTGGAGAGAGGATGCTAGTGGAAGGTGCAGTTCCCAGCCTGTGTCTTACCACCCCTGATGATCTACAAGCAGTAGCAGATTTTAGAACATGCAGAGTGTGCCTGTGCATGGACAGGAGAATGTACCACATCCGGGATTACAACCTGCACCATGCATACGAGATGATTGTTGGAGTAATGGTGGAGACAGTTGACCGACTGCCGAAGATGCTTTGCTGGGAGTGCAGCAGCAAGCTGATCTCCATGAAGACATTCAAGGAGACAGCGCTCAGAACACATCTACTTCTATCTGAGCGACTAACCCTAAATAATATACTAACAGTTAGTGATGTAAAGTCCATAAACCGAGTGAACTACAATTTGAAATCGCACCTGACCCTCAAATACAACGAGCCGGGCGCGTTCGACGTGCACATAGACCACGACCGGCTGGACGTCTTGCAGGAGATCAAGATCGAGTTCAGCAAGATCAACGAGGAGGCGGCCATAGACAAGAGCGGCGTGGAGTGCGACCTGGACTTCAAGCTGGAAGACAGTGAAGTGAAGGACGAGGTGGACCACAGTTTTAGTGACAGTGACGACATCGAACTCAGCGAGTTGAGGACTAAAAAGGTCAAGAAGCGCAAGGGGAAAGTGAAAAAAGAAGCGGAAGTCAAGAGGAAGAAGCGCGTGAAGAAGGAGGAGGCGCCGGAGAAGGAGGAGGACGAGGACGTTATGGAGAAATTCCAGCGGCCGGCGGTGAAGAGGCGCGTGCGGAGCTACGACATCAGCGACAGCCACTTCGACACGCGCCGGCTGACGCTGGAGGAGCAGCTGGCCGAGCTGCAGGCGCGCGCGCGCTCCGCCGCCTACCTCGCCGCGGCGTACAAGTGTGAAGTGTGCTACAAGGGGTTCAAGTCGGCCGACACGCACGGACTTCACGTCGTCCGGCACAGCGAGAAATATGGCGAGTTCGAGTGCTTCATCTGCAAGCGGCGGTTCAAGAACGCGCGCCACCTGCGGCTGCACGTGTCCAGCCTGCACACCGAGCAGTTCAGCTGCAAGGCCTGCGACTTCGTCACGCGGTGCCGAGGCATAGCGATAGACCATCAGAAGTGGCACTCCGGCAACACGTACGCCTGTCCGCACTGTCCCTCCAAATTTGGCAAATTCACGTCGTACATGTCGCACCTGCGGATCAAGCACTCGTCGCGGTTCGCGTGCGAGCTGTGCGGCTACACGTTCGTCAGCAAGCGCGGCGTCGAGATGCACAAGGCCAAGCGGCACAAGCTGCAGGACGTACAGATGAAGCTGGACGGGCCGTACTGCGAGGAGTGCAAGCTGCGGTTTTCCAACGACGAGGCCTACCTGCGGCACCTCACGCAGTCCTCCGTGCACAGCAGCGACAATGACCCTAACCGCATCCGCAACGACTGGGGCTGCAAGGAGCAGCTGGGCGTGGTGCGGCGATCGCGCAAGCGGCGCGCGCCCGGCGTCGTGACGCACTGGGGCGAGCACCCCGACCGGCCCAAGCAGAACATCCCCTGCGAGCAGTGCGGCGAGCAATTGGACAGCTACCGGTCGTACGCGCAGCACTTTAGAATGGCGCACCCCGGCCTCAACCGCACCAAGTTCTCGCGCGTCGCCGGCGCCTGCATGTGCGAGCAGTGCGGCAAGATGTTCGCGTGCAAGGCGCTGCTGCTGGACCACATGATGTCGCATTCGGGAGAGAAAAGATTCAAGTGCGAAGCGTGCGACAAGGCGTTCACTAACAAGAACAATCTGGCGGTTCACCAGCGTGTCCACGGTGCGCAGGTGCCGACGTACCGCTGCCCCTACTGCGAGCGCCAGTTCCACTTCTACCAGAACTGCAACCGGCACGTGAAGACCGTGCACAAGGGAGTGAAGCAGTTCCAGTGCGAGATCTGCGGGAAGGAGTTCACGTCGGCGGCCGGCCAGCGCGCGCACGTCGACCACGTGCACCACAAGAAGCCCCGCCCCAAGCGCGTGCGTGCGCGCGCCCCGCCCACCGCCTACCGCGACTAG
Protein Sequence: MSCCIFTCVNSETSSAPYEDVTFYKIPKEYQLKQLWTEAIGIPEWQLRPNSEVCSAHFQEHDFTISETGERMLVEGAVPSLCLTTPDDLQAVADFRTCRVCLCMDRRMYHIRDYNLHHAYEMIVGVMVETVDRLPKMLCWECSSKLISMKTFKETALRTHLLLSERLTLNNILTVSDVKSINRVNYNLKSHLTLKYNEPGAFDVHIDHDRLDVLQEIKIEFSKINEEAAIDKSGVECDLDFKLEDSEVKDEVDHSFSDSDDIELSELRTKKVKKRKGKVKKEAEVKRKKRVKKEEAPEKEEDEDVMEKFQRPAVKRRVRSYDISDSHFDTRRLTLEEQLAELQARARSAAYLAAAYKCEVCYKGFKSADTHGLHVVRHSEKYGEFECFICKRRFKNARHLRLHVSSLHTEQFSCKACDFVTRCRGIAIDHQKWHSGNTYACPHCPSKFGKFTSYMSHLRIKHSSRFACELCGYTFVSKRGVEMHKAKRHKLQDVQMKLDGPYCEECKLRFSNDEAYLRHLTQSSVHSSDNDPNRIRNDWGCKEQLGVVRRSRKRRAPGVVTHWGEHPDRPKQNIPCEQCGEQLDSYRSYAQHFRMAHPGLNRTKFSRVAGACMCEQCGKMFACKALLLDHMMSHSGEKRFKCEACDKAFTNKNNLAVHQRVHGAQVPTYRCPYCERQFHFYQNCNRHVKTVHKGVKQFQCEICGKEFTSAAGQRAHVDHVHHKKPRPKRVRARAPPTAYRD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00745139;
90% Identity: iTF_00288928;
80% Identity: iTF_00288928;