Basic Information

Insect: Celastrina argiolus
Gene Symbol: RREB1
Assembly: GCA_905187575.1
Location: LR994577.1:22924060-22946778[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.06 6.1 8.1 0.8 2 23 93 115 92 115 0.95

2 12 0.11 11 7.3 0.7 2 21 156 175 155 176 0.93

3 12 0.017 1.7 9.9 0.1 1 23 296 318 296 318 0.97

4 12 0.00022 0.022 15.8 0.2 1 23 327 349 327 349 0.99

5 12 0.00056 0.058 14.5 2.0 1 23 355 378 355 378 0.97

6 12 0.0023 0.24 12.6 1.6 1 23 731 754 731 754 0.96

7 12 0.00019 0.02 16.0 1.3 2 23 947 968 946 968 0.97

8 12 0.019 2 9.7 5.3 1 23 974 997 974 997 0.97

9 12 0.17 17 6.7 1.4 1 23 1028 1052 1028 1052 0.90

10 12 0.35 36 5.7 0.3 1 23 1075 1098 1075 1098 0.92

11 12 0.0014 0.14 13.3 0.2 2 23 1138 1159 1137 1159 0.96

12 12 0.022 2.2 9.5 5.3 1 23 1165 1187 1165 1187 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.06	6.1	8.1	0.8	2	23	93	115	92	115	0.95
2	12	0.11	11	7.3	0.7	2	21	156	175	155	176	0.93
3	12	0.017	1.7	9.9	0.1	1	23	296	318	296	318	0.97
4	12	0.00022	0.022	15.8	0.2	1	23	327	349	327	349	0.99
5	12	0.00056	0.058	14.5	2.0	1	23	355	378	355	378	0.97
6	12	0.0023	0.24	12.6	1.6	1	23	731	754	731	754	0.96
7	12	0.00019	0.02	16.0	1.3	2	23	947	968	946	968	0.97
8	12	0.019	2	9.7	5.3	1	23	974	997	974	997	0.97
9	12	0.17	17	6.7	1.4	1	23	1028	1052	1028	1052	0.90
10	12	0.35	36	5.7	0.3	1	23	1075	1098	1075	1098	0.92
11	12	0.0014	0.14	13.3	0.2	2	23	1138	1159	1137	1159	0.96
12	12	0.022	2.2	9.5	5.3	1	23	1165	1187	1165	1187	0.97

Sequence Information

Coding Sequence: ATGCAGGGAGCCGCGAGCGCGCCCGCGCCACCTGCGGCCGAGCCACCCTCCGCCCAGCAAATCAAAACAGAAGTCATCATCGAAGCCAAAGTAGAATCCAAAAATCAAGACGAAGAAATGAAGAAGGATAACGAGATGAGACCTGTACGAACGAACAGCATCGACAGCGACAATTGCTCGGACAGGAGCGATGATGACGATTGCAGGAAGAACCGCAAGAGAGCGGCGTCACCATCGCCCACACCAATGCCTTTAGATAAGAGAACTGCTCTCTTAGAATGCTCCAAATGCGTCCAAAGATTTGATTCTAGAAACGCCTTTGAGTTGCACAAGCTTACCTACCATAGAGAAGATGCTAGAACTATTTTCAATGATCTCTCTTATCCAACCTTTCCCAACAAAAAGTACCCAGACATATCGCGCAGCGCATACGAACGGAACTCTCATATTACCGAAGATTATTTACGTTGTGAAAATTGTTCGGAAGATTTTAAATCATTACACGTGCTGGAAAGTCACAGAAAATCGTGCATTAAAATGAACAGTGCAGAACATGAGAGAAGAGAAGATTTTTTCTCTAAGCTAGATCTCCGAAACAGATCTTTTGGAATTCCTGGAACTTTAACTCCGCCCATGGAAAAATTTCCTCCCAAATACGATGAGGCTCATCTTACCAACGGCCTAAGGCAAATGGATGATCTTGCAGACATTTCGTCAATTTTAAACGTTACATCGACTAGTAGCCTACTCGAAAGATTAACAGGACGAGGATCCTTGCATAACTCAGTTCTTACCCCACCAGACACTGTAGCTAAAGATCGTGATCAGGAAGAAACTCAAGACAATTTTGCGGCGGAGTTCAGACGAATGAAACTTCGCGGGGAATTTCCATGTCGCCTTTGCCCGGCTAAGTTTCCAAATCTGAGAGCTTTAAAAGGTCACAACAGAGTCCATTTAAGTGGCACTGGGCCAGGGCCATATCAATGTAATATGTGCCCACAATCTTCATTAGACAAAGCTGCTCTTGTTCGTCACATGAGAACTCACAATGGTGACAGGCCGTATGAATGCGCTGTATGCAATTACGCTTTCACTACCAAAGCTAATTGTGAACGCCACTTACGCAACCGGCATGCTAAAGTAACTAGGGAAGATGTGAAAAGGTCTATTATATATCATCCATCTGAAGATCCTAACAATGATGAAATGAATTCGAAAGTAGCTAGAGATGACTTTAAACGAGCCTTACCATTCCATACTCCAGAATCAGAACGATCTATGGAACATACTGGAAGGAGTACTCCATTAGGGCACTATACCCAACCATTTGTTCCCGATAGGCAGCATCCTATTTTATCTTTAACTAAACCTAAAGGATTGCCTGATTCGCCTATAATGCCATCAAAAGAAAGTGAATCACTAATGCCTAAGATTAACGTTGTGAATTTAGGGAAACTAACGCAAATACCTGAATACAGGGCACCTGAAATACCATATAAAGAAAATGATCCCACACCGATCAATACATATAATGAAGATACCCCGGTCGATTTGAGTACAAACGACAATAGCTGTGATGTACTTGACCTTAGCAAGAAAAAACGAGACGTTGATGATGAAAAACCCAAGATTTCACCTAGAGCTCCTTTCGATAGCTCACCTTCAACTACAGCTTCAGTGGCAGCATCAGCTATTGAGAAAACGAGATTTCTTCTAGCTCAACAAAGATTATTTGAAAACTCTATGCCAAAACTCGATACGGCCTATTACGCATCCCAATTATCTCAACTGTATGCGGGTGCCGTACCTGGTTTACCTAGCTTGCCGCTGCCTCCATCTTTTCCTCTCAATCCATACTTTCTCCAACCTTCGTTTTTTCCTCATCCTTCAGATACTCAAGAGCTTGTAGAAATGAAACAGCACATACAAAAAGTTATATTTCAAGGTCTTAGCATGTCCGGAGGTGGGTTAGTAAAAAATGAAAATGTATCACAACCCAAACAAGAACAAGAAGAAGAAGACCAGAAACCTATACATATAGATACATCTTTGAGCCCACCCCCTGCTTCGGAATCGCCTCGTCCCCTGAGCAATAGTATGGTCACCCAAAACGATTCCGTAAAAATGGTGATAAAAAATGGTATTTTAATGCCTAAACAAAAACAAAGACGCTACCGCACAGAAAGACCCTTTTCTTGCTCGCAGTGCTCGGCAAGATTTACTTTACGCTCAAATATGGAAAGACACGTTAAGCAACAACATCCGCAACATTGGAGCATCAAAAGACCAACACCACGAGCTCCCCCACCGTATCCACAAGACAACATCACGGATCGCGTTAAATATGCTTTACTGGCTGGACAGCTAGAGCGGCCGTTGCAAAATGATCGCTCACCACCTAGGAGGGATTCTGATGAAGTCGCTGATAACGAGGAAGACGAAGATGATACGTTAATCATTGATGAAGAACCCGAAGACGTTAAGCCAGAAGACCATACAGCTGCCCGACAGGCTGCCGCAGAAATACTTTTAGCTACAAGTCGCTTTGAGATGAACAAAGATTTTGATCTTAAAATTACTGGAAATCTAATCAACAAACCGATTGTAATTCCTAATGAAAAAGCTGACGGCATTCCAGATTCGATAAATAAGGAAGACACAATGCCTGTAGTCCCCACTCGCAGCGACGAAGAAGAAGATGAGGAAGGACTTGTGGCTTCGACCAGTGAAGGAAACAACTCGGGAAGCGATGAAAACAAATCTGAATCGGACAATCTGGAATCTGGAAATCAACCGCCAAAGAAAAAGTCGGCATACAGTCTTGCACCAAATCGCGTTTCATGTCCCTATTGTCATCGCAAATTCCCTTGGTCGTCGTCCCTGCGACGACACGTTCTCACTCACACTGGCCAAAAACCTTTCAAATGCCCCCACTGTCCTCTCTTATTTACTACAAAATCAAATTGCGACCGCCATCTGCTGCGAAAGCATGGTGGATCGGCAAAAGCAATATTGGCCGATCCCGTCAGCGTAGTGTCTCCGCCGCAGGGTAGCGAAAGCCGATCGGTCCCGGAGCGACCGTTTAAATGCGCTTCCTGCCCGACAAGCACATTTTCATCGATGGAAACTTTGAAGAAACACATGTCCTCCCGCCACGGAACGGCCGATTCTCAGCCCGGTTCGCCCAACCCTGAAACGGAGGAATTGGACAGCAGCTTAGTCTTCAAATGTCACCTCTGTGAAGCGTCGTTTGGAGAAAGGACGGGCGCTCTCGAGCACTTGGCCACCTCTCATGCTACGGAATACGGGCAACTGGTCAGCAAAGGCGCCCTCGATGCAGCCAGCGATCGCAGTGAAAGCGCAGACGATGATGAAAGAGGGAAATTCCCGGATCACGCCAACAGAAAGGTTGTGTGCGCATTCTGCGTCCGTCGCTTCTGGTCAGCGGAGGACTTGCGTCGCCACATGCGGACTCACAGCGGCGAGAGGCCGTTCGCGTGTGACCTGTGCCGGCGCCGCTTCACTCTCAAGCACAGCATGCTGCGTCACCGCAAGAAGCACCGAGAGGAGGCCACGGACGATGAGGAGGCCTCGTCGCCTATCGTCCAACACGATGACGGTGCAGTTAATGGGTTCTGCTACCAAAACGAGGACGGCTCCGGTTCGGAGATGCCGAATAACGTAAACAACAACAACTCCCCGCCCGCCGCGCCCTACGACAAGAAGCTCAAACTGGACATGACCTCGCGCAAATACTCCACGGAAAACGAAAACGACGCAGAGACCGGCGGCGACCTCATCGGCAAACTCCTAGGCATTCCCGACAAGACCATCATCAATAAGCTCCTCTCCTCCGCGGACGTGGCCGCCAAGTTCCTCGGGGTGAACAAATGA
Protein Sequence: MQGAASAPAPPAAEPPSAQQIKTEVIIEAKVESKNQDEEMKKDNEMRPVRTNSIDSDNCSDRSDDDDCRKNRKRAASPSPTPMPLDKRTALLECSKCVQRFDSRNAFELHKLTYHREDARTIFNDLSYPTFPNKKYPDISRSAYERNSHITEDYLRCENCSEDFKSLHVLESHRKSCIKMNSAEHERREDFFSKLDLRNRSFGIPGTLTPPMEKFPPKYDEAHLTNGLRQMDDLADISSILNVTSTSSLLERLTGRGSLHNSVLTPPDTVAKDRDQEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPQSSLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKVTREDVKRSIIYHPSEDPNNDEMNSKVARDDFKRALPFHTPESERSMEHTGRSTPLGHYTQPFVPDRQHPILSLTKPKGLPDSPIMPSKESESLMPKINVVNLGKLTQIPEYRAPEIPYKENDPTPINTYNEDTPVDLSTNDNSCDVLDLSKKKRDVDDEKPKISPRAPFDSSPSTTASVAASAIEKTRFLLAQQRLFENSMPKLDTAYYASQLSQLYAGAVPGLPSLPLPPSFPLNPYFLQPSFFPHPSDTQELVEMKQHIQKVIFQGLSMSGGGLVKNENVSQPKQEQEEEDQKPIHIDTSLSPPPASESPRPLSNSMVTQNDSVKMVIKNGILMPKQKQRRYRTERPFSCSQCSARFTLRSNMERHVKQQHPQHWSIKRPTPRAPPPYPQDNITDRVKYALLAGQLERPLQNDRSPPRRDSDEVADNEEDEDDTLIIDEEPEDVKPEDHTAARQAAAEILLATSRFEMNKDFDLKITGNLINKPIVIPNEKADGIPDSINKEDTMPVVPTRSDEEEDEEGLVASTSEGNNSGSDENKSESDNLESGNQPPKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHGGSAKAILADPVSVVSPPQGSESRSVPERPFKCASCPTSTFSSMETLKKHMSSRHGTADSQPGSPNPETEELDSSLVFKCHLCEASFGERTGALEHLATSHATEYGQLVSKGALDAASDRSESADDDERGKFPDHANRKVVCAFCVRRFWSAEDLRRHMRTHSGERPFACDLCRRRFTLKHSMLRHRKKHREEATDDEEASSPIVQHDDGAVNGFCYQNEDGSGSEMPNNVNNNNSPPAAPYDKKLKLDMTSRKYSTENENDAETGGDLIGKLLGIPDKTIINKLLSSADVAAKFLGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00406201;
90% Identity: iTF_01178998;
80% Identity: -