Basic Information

Insect: Celastrina argiolus
Gene Symbol: pita
Assembly: GCA_905187575.1
Location: LR994584.1:11097745-11119074[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.66 68 4.9 0.6 2 23 198 220 197 220 0.90

2 10 0.00017 0.017 16.2 0.5 2 23 226 247 225 247 0.97

3 10 0.00011 0.011 16.7 1.2 1 23 253 276 253 276 0.93

4 10 0.043 4.4 8.6 0.9 1 23 282 304 282 304 0.97

5 10 5.9e-05 0.0061 17.6 2.6 1 23 311 334 311 334 0.90

6 10 0.00015 0.015 16.3 1.2 1 23 340 362 340 362 0.97

7 10 3.8e-06 0.0004 21.3 7.2 1 23 368 391 368 391 0.98

8 10 7.8e-05 0.008 17.2 0.2 1 23 403 425 403 425 0.95

9 10 0.0013 0.13 13.4 0.1 2 23 431 452 430 452 0.97

10 10 0.00079 0.081 14.1 0.2 1 23 458 481 458 481 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.66	68	4.9	0.6	2	23	198	220	197	220	0.90
2	10	0.00017	0.017	16.2	0.5	2	23	226	247	225	247	0.97
3	10	0.00011	0.011	16.7	1.2	1	23	253	276	253	276	0.93
4	10	0.043	4.4	8.6	0.9	1	23	282	304	282	304	0.97
5	10	5.9e-05	0.0061	17.6	2.6	1	23	311	334	311	334	0.90
6	10	0.00015	0.015	16.3	1.2	1	23	340	362	340	362	0.97
7	10	3.8e-06	0.0004	21.3	7.2	1	23	368	391	368	391	0.98
8	10	7.8e-05	0.008	17.2	0.2	1	23	403	425	403	425	0.95
9	10	0.0013	0.13	13.4	0.1	2	23	431	452	430	452	0.97
10	10	0.00079	0.081	14.1	0.2	1	23	458	481	458	481	0.95

Sequence Information

Coding Sequence: ATGGAAAAAAGAAAAGAAAAAATTAGTACTCATAAAGTATGTCGTTTTTGTTTGTCGGAGAGTGAACCATTGGAGAATTTGTACGAAAGAAACCAAACATCAAAGGATGCTGTAAATCTTCATTTAAAAATTTTAACATGCGTTTCGGTTGAGGTTTTCCCTTCTGATAAGATGCCCTGTTATATATGCAACCGCTGCAATTCCCTAATGAACTTGTTTTACAACTACAAACATATTGTCCGGCAAGCGGATGAGAATATTTTACATTATATTCAGAGTGGTACACCGCTGGAACCAATCAATTGGTCATCGGCATTATTAAAAGCTTCAAAAATATCCAAAGAAGTAGTAATGAAGACCGTAGTGGAAGGTGGAGCAACAGTTCAGGTATCGTCTCAAGATGCTTCAGACAGTGAAGAAGAGGATGATGGCAACATCTATAGTGTAAAGATTGGAGATGGAATGGATGGTGAAGAGAAAACAGCGTGTATTAAAGTTGTGTCTGCTAAAACACCTGATAGCATGGAACTCTCCGAACCAAGTCAAGGGAATAAAACTGAGAAGAGTCAGCCTGGGGTGGATGGATGTTGGCCATGTAGCGAATGTGACTGTACATATCCCCTGGAACAGCTGCTAGAATTGCACAAGTCACAGAAGCACCGAGCCAGGAAAGTGCAGTGTGACAAATGTGATGCGAAATTTTTTAATAAGTATGACCTAGCCACACATTTGTTGCGTCACTCCGACGAGATGCCATTCCAATGCGTGGCATGTGGCAAAAGATTTAAGAGGAATATATTGCTCAAACGACATGAGAAGTTTATTCATTCTGATTGGCCACAACACACTTGCCCTAACTGCCCTGCCACATTTCTCTCATTGGAGGAGTATAAATCACACGCGAAGAAGCATATTCGTTTACCCAGACCATATTCCTGCTCTCAGTGTCATAAGACATTCAATGACAGAACACTGCTGCAGCGTCACAAAGATGCAGTACATAATAGAACTCTGAGTTTCCACTGCGAGTATTGTCCAGAGCGTTTCTCGTCTGTGACGAAGCTGGCGCGGCACGTGCGCGGCCACGCCGGCGTGCGGGCCTACCCGTGCAAGTACTGCGACAAGAGCTTCACCAAGTCACATCACTATACTAGACACCTGCGCGTGCGGCACCGCAACGAGACGCGCTCGTCCCGCGACGAGCAGTATCGCTGCGAGCAGTGCGACATCACCTTCAACACGCAGGACGAGCTCATATACCACTCCGCCATACACGCCACGCAGAGCCTCACCTGCCCGCTGTGCCAGGAGAAGTTCAACGACGTGGACGCGGTCACCACGCACATCAAGTCGCACGTGACCGGGGACGAGTTCATGTGCGACTTCTGCGAGCTGGTGTTCACTTCGCGGGAAAAGCTGGACAGTCACATGATGGCAGCTCACGACGAGGAAATGCAACAGGATGTGCAAGATGAGTCGGAAGGGATGGATGCGGAAGATGAAGACGAAGACAACTCAATCAACGTCAAAGAAGTGGACGAGAATAACATGGTCATAGAAATCAAAAAACCTGACGAATTTATGATAAAAGGCACAAATGAAAGTAGAAATGAAAAAGTTGAAAACACGAATTCTGAAGAAAGCGAAGCAGAAGCGACGCCTAATGACGTGATAATTCCAACAACCACACCAACAGTAATAAAGAAACCGCCAATCACAATACTGTCCGAGCAAACAATATACAAACCCGCCGAGACTGTGACCTCTGACCAACTTGAAACTGCAAAGGAGAGTCCTAAGCCGCAGACGAAGAAGAACAATACTCAGTTACTAGACATGGTTTGGTGCGAAGATGAACCTAAACCAAAAGCTGTCCAGCAAACAGAAGCTGCACCAGCTAAGAAAGTAAAGCCATCAGCGAAAGTGGAAAGCAGCGGTGTAGGAGACAAGAGCTTGCGACTCCTTGAGAAAGAATTACAAGATCTGAAACGAACCACAAACTCTTCAAAGTCATCTGGAAAATCAACCGATGGAAACCACAAGAGCAGAAGGCCACTGCACAGTTCTACTCCCAAATTAAAGTCTGGCGAAGAAAAAAAAATTAAATCAGTCATACCTAAGAAAGTGCCCACCAAAGAAAATAAAGAGCCCAAGGAGGTTAAAGAGAAAGAGCCAAAAACTAATGGCAATGACAAAGAAGACAAAGATAGAAGAGAAGAAAAAGAGTCGAAGTCGTTACTCAAAAATGGCGGCAACTCAAGCGACAAGAGCACGGACGAAGGCATCCGTCGGTCCACGCGGCCGTCCAAAATCAAGAACTACGCGAAAATGGTCCGCGACAAGCCGCAGCCGGAGTCCGACGAAGACACGGAGGACGACGGCGATGAGGAATACAAGGAGGTTGAGTCCCGTTCGCGCGGCCGGCGGTCGAGTTCGAAACACTCGCCCAAGCCCACAAGCACGGTGACCTCCGCCACGCCCGTCAGGAAACGAGGACGGCCGAGGAAGGACGCTGGCACACCGGTGCCAGCTAAAGTCAAGAAGGAATCTGAAGAGTCAGATGAGGAAGCAAAAGATATTGCAAACAGTAGTAAGCTGAAATACTTATTAGAACGGAATAAGTTACAGCCGATGCCTTCTACTTCAGCCGAAGTGAAGTCTCCGCCAATGCTAGTTTATCCAAGTGGGCAAACCCTCAAAAAGATACCTGTGAAGGCGCTACCGCCGGGAGTGAAGGCGTTACCACTTCCAGCAAATGCTAGACTCACTGGAGATCTGTGTGAAATGCAAATTGGAAAGAAAGTTGTGAAGGTCCAGAAAATTGTAATGACCCGAGCTGAAGTTGAAGCTATGGCTAAGAAAGGACTTGTTGAAATGAAGGATGGTACGATGGTGCTAAAGCAAGGTATAAAGCTACCGACATCAGACCCAGCTAACATAAAATCTACATTAGTAGGTGAAACTAGTGATGCATCCAAAGAACCCTCACCCAAACCGACACCCAAAAAAGAGATCCCTAAAGCGACCCCGACTCGGTGCGACCTTGAAGAATCGTAA
Protein Sequence: MEKRKEKISTHKVCRFCLSESEPLENLYERNQTSKDAVNLHLKILTCVSVEVFPSDKMPCYICNRCNSLMNLFYNYKHIVRQADENILHYIQSGTPLEPINWSSALLKASKISKEVVMKTVVEGGATVQVSSQDASDSEEEDDGNIYSVKIGDGMDGEEKTACIKVVSAKTPDSMELSEPSQGNKTEKSQPGVDGCWPCSECDCTYPLEQLLELHKSQKHRARKVQCDKCDAKFFNKYDLATHLLRHSDEMPFQCVACGKRFKRNILLKRHEKFIHSDWPQHTCPNCPATFLSLEEYKSHAKKHIRLPRPYSCSQCHKTFNDRTLLQRHKDAVHNRTLSFHCEYCPERFSSVTKLARHVRGHAGVRAYPCKYCDKSFTKSHHYTRHLRVRHRNETRSSRDEQYRCEQCDITFNTQDELIYHSAIHATQSLTCPLCQEKFNDVDAVTTHIKSHVTGDEFMCDFCELVFTSREKLDSHMMAAHDEEMQQDVQDESEGMDAEDEDEDNSINVKEVDENNMVIEIKKPDEFMIKGTNESRNEKVENTNSEESEAEATPNDVIIPTTTPTVIKKPPITILSEQTIYKPAETVTSDQLETAKESPKPQTKKNNTQLLDMVWCEDEPKPKAVQQTEAAPAKKVKPSAKVESSGVGDKSLRLLEKELQDLKRTTNSSKSSGKSTDGNHKSRRPLHSSTPKLKSGEEKKIKSVIPKKVPTKENKEPKEVKEKEPKTNGNDKEDKDRREEKESKSLLKNGGNSSDKSTDEGIRRSTRPSKIKNYAKMVRDKPQPESDEDTEDDGDEEYKEVESRSRGRRSSSKHSPKPTSTVTSATPVRKRGRPRKDAGTPVPAKVKKESEESDEEAKDIANSSKLKYLLERNKLQPMPSTSAEVKSPPMLVYPSGQTLKKIPVKALPPGVKALPLPANARLTGDLCEMQIGKKVVKVQKIVMTRAEVEAMAKKGLVEMKDGTMVLKQGIKLPTSDPANIKSTLVGETSDASKEPSPKPTPKKEIPKATPTRCDLEES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00745053;
90% Identity: -
80% Identity: -