Basic Information

Gene Symbol
CRZ1
Assembly
GCA_905187575.1
Location
LR994597.1:4847932-4861079[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 4e-06 0.00041 21.3 1.6 1 23 7 29 7 29 0.97
2 15 0.0015 0.16 13.2 3.1 1 23 35 58 35 58 0.97
3 15 0.00032 0.033 15.3 3.6 1 23 65 87 65 87 0.97
4 15 7e-05 0.0073 17.4 2.6 1 23 93 115 93 115 0.98
5 15 0.0021 0.22 12.7 6.3 1 23 121 143 121 143 0.98
6 15 2.5e-05 0.0026 18.8 0.8 1 23 150 173 150 173 0.93
7 15 0.17 17 6.7 1.9 2 23 182 204 181 204 0.94
8 15 4.9e-05 0.0051 17.8 0.4 2 23 211 232 210 232 0.98
9 15 0.00068 0.07 14.3 0.4 3 23 240 262 238 262 0.86
10 15 2.8e-05 0.0029 18.6 2.5 1 23 268 290 268 290 0.96
11 15 0.00013 0.014 16.5 1.7 2 23 298 320 297 320 0.94
12 15 2.1 2.2e+02 3.3 0.7 1 23 326 349 326 349 0.93
13 15 0.045 4.6 8.5 0.6 2 20 354 372 353 376 0.93
14 15 8.2 8.4e+02 1.4 4.9 1 23 713 735 713 735 0.90
15 15 0.016 1.7 9.9 5.9 1 23 888 910 888 910 0.98

Sequence Information

Coding Sequence
ATGAGCAGCGCAGCCAAACATAAATGTAAAATATGCAAAAAGGTATTTACCGAAGCGAGCGGTCTTCGTCAACACATACAGTTGCATTCATCAGATAACCCGTATGAATGTCATTTGTGCGAGTATACGGGAAAGACACAGAAGTATCTAAGCAGGCATATAAAACTGAGACATACATCTTCTGCTGCTTCTCATGAGTGTAGCTACTGTGGAAAAATGTTTCATTATATGTCAAAATTAAACGAACATCTCCTTATTCATACAAATTCCCGGCCACACAAATGCGATGTCTGTGGAAAAGGATATAATACTCGTTATTGTTTAGCAATACATCAAAATGTACATAAAGCTGTGAGACCATACAAATGCCTGTACTGTGAATATGCATGCAACGATAAATCAACGCTAAGGAAGCACCACGAGAGACATACTGGACTCGCAAAAATCTTCCAATGCGAGAAATGCTTGAGAAATTTCAAAAGAAAAAGCGATCTCCGAGCGCACGTGTCCGAGGCGCATTTGAATGTGGATCTCAAGACAAAGCCGTGTCAGATCTGCGGGAACTTGTTCAAGACGACGTCAACGTTAAACTGCCACATTAAACAAGTCCACAAAAAAGTGTACGAGACGAAGTGCGACATCTGCGGGCTGTACATCAGCAACCGGTACAACCTGAAGGCCCATCTCCGCTCGCACATCGATGTCAAGCCGTTCCTCTGCGGGTTTGAGGGCTGCGGCAAAAGCTTCAAGGATAAGCAAACTCTGGTGAAGCACAGCGTGATCCACTACCCCGAGCAGCACCACGCGTGCGAGGTGTGCGGCAGGCGGTTCGCGCGCGCGCACCGCCTCCGCGACCACATGAGGCAGCACCGGCCGCGCGTCAAGGACGTCACCTGCGACCACTGCGGCGTCAGTTTCTACAGCAAGAACTACCTGAGCAAGCACATACTACAGAAGCACATACTGCGCGCGCAGTTCTTCTGCGACGCGTGCGGCTTCTGTGCGCACAACAAGCCGGGCCTCGTTATGCACATCAAAGCCGGCCACGACCCGGATCTCACGTGTAAGTTATGCAAGAAGGTTTCCAAGACCTACATCGCCCTCAAGGCGCACTACTGGAGCACGCACTTCGTCAAGTACAAGAGCCGGACGAAGACTGCTAAGAAGAAAAAGAAAATTAAAGAAGTAAAAATCAAGGAAGAGCCTATAGAAGAGGATGCATCGTTGGAAAACGTAGAAAATGATAAACACGACATATCGCGAGGTACGGATGCGGAGCAGGCGGCTAAAGTCAAGGAGCTGATGATGAACGCGGTGATAGCCACCTCCGACAACCTGGAGACCCTGTTTAGAGACCTGCTGCGCCCGCCCGGAGATGGTGATGATGATGATATAGATTATTATGACTATCCATTGTTGTGTGACGCCAAAACTGAGGAGACGGCTCAAGAACAAATAAAAGAGATGCTAACTAAAGATCAGCTGTCAATTTTTTACGGAAATAAAAGAAAAGTCCTAGAAAAAGTTAAAATAGAGCCTACAATAAGTGATGATAACAAACCTGGTACAAATGTAGAAGGTTCACCGCGAATGTCAAGTACCGTTACACACAAACTAGTACCAATTGAGTGGTCACCTAATGATAATAATTCTGTGCCAACTGATTCTGTGTCTGATATGACGAATAAAATAGCAGTTGTAAAAGACACTACTTTATTAAATAACGTTACGGAAACAACTAAAAATGATTCCGAACATGAAATAGAAAATAGTGATGTAAATAAAGGAGTTAAAAATGTGACTAAAACCAGTAAAGTAAAAAAGAAAAGGCATAAAACAAAAACAAACAAAGTCGTTAAAAAGAAAAATGGCAAAAAAGAAGGCGGAGATAAGGTGAAAGCAGTAAAAAGAAATTATATAAGGAGAAAACTATTAATAATAGGACTGCCAAAAGTGAACCTAACTAATACAGACAAAACCGAAGAAACAGTCTCAAATGCAACTAAAAGTAACACAGAAATAGAAAGTCCTGGAGATGAAGAAGTTGAACAGAATGAAGGTGAAAAGGAGGAGATAGATCAAGACAAAATTGGAGCAAATCATTCTAAGAAATCCATGGAAATCGTGCTCAACTCTCATCAGTGCTATGAATGCTTTATGCTCTTTGATACCAAAGATAAACTTCTTGACCATTGCAAAGAGCATTACAATTTGTGCAATGACGTGATGCTGAAGAAATGCCCACTTTGTGATTTCGTCACCCACGGGTCACTGCCTCGGCATATTAAGTTGGTCCACGATATGGACCTTAAAAATATATATCGGCCGAGTTTAAAAGAAAAAGAAAACGAATCCGGTTCCAGGTATTTCTATAACGTGGACAGCGAAGCAGTCGATAAAATAGATATCATTCCCAGCGTCAAATACTTGAATAAAATGGCATACGTCAAACTAGACAAACTAAGAAGACAGGAGAATAATAAAGCAGTCCGGAAAACTAAATTGGTTAAAAAACAAGGTGAATGGGTTGTAGAAAAATGCGATATTGATATTAAAGACAAGAACATAGTGATACCGGATTTGAAAAAGATCGAGGGTGATTATTTCGAAAGTCTCAGAAGGATGGCAAGGGTCGCTAAGAAAGAAGGCAAGAAGTTTCTGTTTCCGTGCAAAGAATGTGAGAAAATATGCCAAACTCTATCTGCCCTGAAACTGCATCACAGGCACCACGATCCAGACAAAAAACCGTTCAAACCCAAAGTGTGGAAACACAAAATTACCGGTAGAAAGAAACCTCAAGAAACAAAAGCAACGGAAACTGAAAAGAACACAGACGTTGATACTAAGAGATATGAGAAACCCAAGCCGATTGTGAATAAACACAAGTGCGATCCTAAACTGATGGAGTTCTATAGGAACAACATAAGAGGTGGCGACATAGAATTTTGGCAGTTTTTGAAAATTTACAATCGAATGGCCAAAGACAACGTCAACGATTTCAAAGATTTGGAAAATTCAACGGAATTTGGCATCCATATCGCCGACAAAACTCGAAGTGATGATTCTACCAACCACACGACTGATACAAATTCTATAAAGTTAACTACTACAGTAGAAATTTCTAGACTATCAAATAAACCATCGAAATTCAAAAGGATCATGATGGTAAATAGAAAAGATCTTATCAGACGAAACAGACTAAAGCAGCAGCTTAGGGAGAAAATAAATATGAATGCTAAAACATAA
Protein Sequence
MSSAAKHKCKICKKVFTEASGLRQHIQLHSSDNPYECHLCEYTGKTQKYLSRHIKLRHTSSAASHECSYCGKMFHYMSKLNEHLLIHTNSRPHKCDVCGKGYNTRYCLAIHQNVHKAVRPYKCLYCEYACNDKSTLRKHHERHTGLAKIFQCEKCLRNFKRKSDLRAHVSEAHLNVDLKTKPCQICGNLFKTTSTLNCHIKQVHKKVYETKCDICGLYISNRYNLKAHLRSHIDVKPFLCGFEGCGKSFKDKQTLVKHSVIHYPEQHHACEVCGRRFARAHRLRDHMRQHRPRVKDVTCDHCGVSFYSKNYLSKHILQKHILRAQFFCDACGFCAHNKPGLVMHIKAGHDPDLTCKLCKKVSKTYIALKAHYWSTHFVKYKSRTKTAKKKKKIKEVKIKEEPIEEDASLENVENDKHDISRGTDAEQAAKVKELMMNAVIATSDNLETLFRDLLRPPGDGDDDDIDYYDYPLLCDAKTEETAQEQIKEMLTKDQLSIFYGNKRKVLEKVKIEPTISDDNKPGTNVEGSPRMSSTVTHKLVPIEWSPNDNNSVPTDSVSDMTNKIAVVKDTTLLNNVTETTKNDSEHEIENSDVNKGVKNVTKTSKVKKKRHKTKTNKVVKKKNGKKEGGDKVKAVKRNYIRRKLLIIGLPKVNLTNTDKTEETVSNATKSNTEIESPGDEEVEQNEGEKEEIDQDKIGANHSKKSMEIVLNSHQCYECFMLFDTKDKLLDHCKEHYNLCNDVMLKKCPLCDFVTHGSLPRHIKLVHDMDLKNIYRPSLKEKENESGSRYFYNVDSEAVDKIDIIPSVKYLNKMAYVKLDKLRRQENNKAVRKTKLVKKQGEWVVEKCDIDIKDKNIVIPDLKKIEGDYFESLRRMARVAKKEGKKFLFPCKECEKICQTLSALKLHHRHHDPDKKPFKPKVWKHKITGRKKPQETKATETEKNTDVDTKRYEKPKPIVNKHKCDPKLMEFYRNNIRGGDIEFWQFLKIYNRMAKDNVNDFKDLENSTEFGIHIADKTRSDDSTNHTTDTNSIKLTTTVEISRLSNKPSKFKRIMMVNRKDLIRRNRLKQQLREKINMNAKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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