Carg014316.1
Basic Information
- Insect
- Celastrina argiolus
- Gene Symbol
- ZNF296
- Assembly
- GCA_905187575.1
- Location
- LR994578.1:1224286-1238531[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.14 15 7.0 0.2 3 23 99 119 97 119 0.96 2 14 0.51 52 5.2 5.1 1 23 227 249 227 249 0.98 3 14 6.3e-05 0.0065 17.5 0.4 1 23 255 278 255 278 0.96 4 14 0.23 23 6.3 6.7 1 23 283 306 283 306 0.94 5 14 4.2e-05 0.0043 18.1 0.9 2 23 496 517 495 517 0.97 6 14 3.5e-05 0.0037 18.3 2.2 1 23 523 545 523 545 0.98 7 14 0.025 2.6 9.3 3.6 1 23 598 620 598 620 0.98 8 14 0.00089 0.092 13.9 3.4 1 23 655 677 655 677 0.97 9 14 2.6e-05 0.0027 18.7 0.1 1 23 683 705 683 705 0.96 10 14 0.0069 0.71 11.1 4.8 1 23 714 736 714 736 0.99 11 14 0.0001 0.011 16.8 0.6 2 23 780 801 780 801 0.97 12 14 0.03 3.1 9.1 6.2 1 23 818 840 818 840 0.96 13 14 2e-06 0.00021 22.2 0.7 1 23 846 868 846 868 0.98 14 14 4.9e-05 0.005 17.9 5.2 1 23 874 897 874 897 0.98
Sequence Information
- Coding Sequence
- ATGGCTGAAGATTTTGATCCATTAAGCTATGGCTGTGTTGTTTACAATCAACTTATGAACTGCCAAGAGTTGGCAAATCCTTTTCCAATAGGACAACCAGTAGCTAACGGGGGACAACTCAATGAAAATGTGTATGAAAATTCAACAGAACCACCACCGGATGAAGCTCTTACAAGCTTAGAAAACAATGAGGATGTGAAACCAGACATTGTGGGCACAAGCAGTCAGAAAAAAAATGGTCGTCTTAAAAACATGTCTGTGAAAATATCACAAAAGGACTTTAAATTTTATGGCTGCTCCCTGTGTAACATATGTTACCCTACTCTGCCAGAGCTGGACACACATGTGGCATCTCATAATGACCGAATCACTAGCTACGATTTGAGACTAAAAAATCAAATTAAACGGAGAAAAATCAAAAAGGAAACAAAAAAAAATAAGAAATTAAAGGATATAGTGAAAAAAGAAAATGAACTTCTGGATATAGAGATTAAACCAGAAGATGGTTACATTGGAACAGAAAAAGCAAATGAGTTAAACAATTCTAAAGAGAATGAGTCAATTGACGAGAGGAATCTTACAAACTGTGAGAATGGTTCTATTGATGAGAGGAATCAGACAGACAGTCAGAGCGATTTGATTGCAAAGAAAATGGAGTTGCTAAATTTACAGAAAATATATAAGTGTTTTGCATGTTGCAAACAATTCTCTCTTAGTTATTATTTAAAACTTCATGTTAGGTCTCATACAGATGAGAAACCTTATGTGTGTGCGGAGTGTGGACAGTCATTTATAACAGCAAGCAAACTCGGTAGACACAACAAGAGGTTCCACCTTGCTATCAAATATCAATGTAGGATATGTTACAAACTGTTCTGCAGATTTGAATTCCTGACTAGGCATTTTGATAAAAAACATGCTGAACAGAAACTTGAAGGCGAACCTTATGACTACAATGCAATATTGCCTTACCTAAAAGACTTAGAGGAGCAGTTAAAAGAAAAAGAAGAAGAAGAAAAAAAGAAAGAAAAGAGTGTCGACGTCTGGGGAGATCTGTGGTCCGAGCCCTTTGACCAGACACCTAAGCCCCAACAAATTAAAAAGGAAGAAGTAAAAGAGATAGAAGTACCCATTAAAGAAGAAGTATATAACAGTGTACCGATCAGCATAGAAGAGGTGAAACTTGACCCCATCGACTCCATTGAAATTAAAGTAGAAGTGGAGGAGCCTTACAGAGAGATGGGAGACCATCACGATGACGATGATGATGATGACGATGGCAACAAGAATGATATTTTAAAGACAGAAAAGGCAGGAACAGCCGATGATAGCAAAAATGATGTTCTAAAGACGGAGGAGGCAGGGGCAGACGATGATGATGACGACGTCAAGAATGAGGCGACCTCAGACGAGGACTACTTTCCGTCCAACACCTGGGTGTCGACCCCCAAGGAGGAGATGGAGACCAAGAACAAGAACAATCTGGAGTGCGCCGTGTGCCACAAGCGCGTCAGCTCCGCGTCCTACATGCGCGTGCACATGCGCACACACTCCGGCGAGCGTCCGTACCGCTGCCCGCACTGCGACATGGCATTCATCACTGCCAGCAAGATGCACAGACATGCGCTCACGCACCCGGAGACGTGGGAAGACGATGTAAAACCTGAGGTTAAAACGGAGAAAGAAGAAGGGGAGAAAGACAAGAAGACGAAAATGAAGAAAGGTCTAGCGAAGTTTCTCAAGAATACAAAAAGTGGGGAGAAGAAAAAAAACGGATACCAGAAGCGGCCCTACTCCTGCGAGTTCTGCCAGAAGAGGTTCCTGCACCTGGCCACGCTGCAGGTTCACAAGAAGAGTCACGAGGGCGAGCCGCTGGTGTACAAGTGCAACTTTTGCCTCGTGGAGCAGCCGGACGAGGCGGCGCTGCGGACGCACGAGGCCTCGCACACCGGCCCCAAGCCCTACGCCTGCACCGTCTGCGGCAAGTGCTATACCAAGCGCGAGACCATGGTGTACCACCGCAAGTCGCACGCCGAGCACTCGCCCTACATCTGCGACGTCTGCACAAAGGGCTTCTCCTCCGCCGGCAAGCTCCAGCGTCATCTCGCCGGCCACCGCGCCGCGCGCTTCGTGCTGCGCTACGAGTGCCCCGTGTGCGCGCACATGTTCCACACGCGCTACCACGTGCAGCTGCACCTGAACACGCACCAGCGCGAGGGCCTCATCCGCGAGCAGGACCGGCCGCATGTGCTGGCCATGGTGCTGCAGAACGCGCGCCGCCTGCCGCGCGCCGGCGACGCCGCGCCGCCGCCCGCGCCGCCCGACGAGCGCAGCCGCGTGTGCAACATCTGCGGCGAGGTGTTCCAGCACTTCTACTACCTCGAGGAGCACCTCAAGTCGCACGGCTCGCGCATCGCCGTCGCGCCCGCCGAGCCCGCGGAGGAGAAGAAGCACGTGTGCTCCGTCTGCAGCAAGAGCTTCAAGCTGCACTACTACCTCAAGCTGCACAGCTTCACGCACACCAAGGAGAAGCCGTTCATCTGCCAGCAGTGCGGCAAGGGCTTCATCACGCGCGGCAAGCTCAAGCGCCACCTGGAGACGCACTCGGGGCTCAAGAAGTACCAGTGCCACATCTGCTGCAAGTTCTTCACGCGGCCGAGCTATCTGCGCATCCACGTGCGCACCATCCACGGCACGCAGGACTACAACTTCCGGCTCGACGCGCCGCGGCCGCCGGACGGGGACTTCCGCGAGCTGGAGACAGCGGACTGCTAG
- Protein Sequence
- MAEDFDPLSYGCVVYNQLMNCQELANPFPIGQPVANGGQLNENVYENSTEPPPDEALTSLENNEDVKPDIVGTSSQKKNGRLKNMSVKISQKDFKFYGCSLCNICYPTLPELDTHVASHNDRITSYDLRLKNQIKRRKIKKETKKNKKLKDIVKKENELLDIEIKPEDGYIGTEKANELNNSKENESIDERNLTNCENGSIDERNQTDSQSDLIAKKMELLNLQKIYKCFACCKQFSLSYYLKLHVRSHTDEKPYVCAECGQSFITASKLGRHNKRFHLAIKYQCRICYKLFCRFEFLTRHFDKKHAEQKLEGEPYDYNAILPYLKDLEEQLKEKEEEEKKKEKSVDVWGDLWSEPFDQTPKPQQIKKEEVKEIEVPIKEEVYNSVPISIEEVKLDPIDSIEIKVEVEEPYREMGDHHDDDDDDDDGNKNDILKTEKAGTADDSKNDVLKTEEAGADDDDDDVKNEATSDEDYFPSNTWVSTPKEEMETKNKNNLECAVCHKRVSSASYMRVHMRTHSGERPYRCPHCDMAFITASKMHRHALTHPETWEDDVKPEVKTEKEEGEKDKKTKMKKGLAKFLKNTKSGEKKKNGYQKRPYSCEFCQKRFLHLATLQVHKKSHEGEPLVYKCNFCLVEQPDEAALRTHEASHTGPKPYACTVCGKCYTKRETMVYHRKSHAEHSPYICDVCTKGFSSAGKLQRHLAGHRAARFVLRYECPVCAHMFHTRYHVQLHLNTHQREGLIREQDRPHVLAMVLQNARRLPRAGDAAPPPAPPDERSRVCNICGEVFQHFYYLEEHLKSHGSRIAVAPAEPAEEKKHVCSVCSKSFKLHYYLKLHSFTHTKEKPFICQQCGKGFITRGKLKRHLETHSGLKKYQCHICCKFFTRPSYLRIHVRTIHGTQDYNFRLDAPRPPDGDFRELETADC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01178882;
- 90% Identity
- -
- 80% Identity
- -