Basic Information

Insect: Celastrina argiolus
Gene Symbol: -
Assembly: GCA_905187575.1
Location: LR994592.1:3571371-3578346[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00029 0.03 15.4 0.5 1 23 128 150 128 150 0.96

2 12 7.2e-07 7.5e-05 23.6 2.5 1 23 155 177 155 177 0.99

3 12 1.5e-05 0.0016 19.4 1.3 1 23 204 226 204 226 0.99

4 12 4.9e-06 0.00051 21.0 4.7 1 23 236 258 236 258 0.98

5 12 7.1e-07 7.4e-05 23.6 3.5 1 23 264 286 264 286 0.99

6 12 1.1e-05 0.0011 19.9 5.3 1 23 292 314 292 314 0.98

7 12 0.00045 0.047 14.8 0.5 1 17 320 336 320 337 0.92

8 12 0.12 13 7.1 0.1 7 23 354 370 354 370 0.96

9 12 1.6e-05 0.0017 19.3 1.1 1 23 376 398 376 398 0.98

10 12 7.2e-07 7.4e-05 23.6 3.5 1 23 404 426 404 426 0.97

11 12 8.3e-08 8.6e-06 26.6 1.9 1 23 432 454 432 454 0.98

12 12 0.043 4.5 8.6 2.5 1 20 460 479 460 482 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00029	0.03	15.4	0.5	1	23	128	150	128	150	0.96
2	12	7.2e-07	7.5e-05	23.6	2.5	1	23	155	177	155	177	0.99
3	12	1.5e-05	0.0016	19.4	1.3	1	23	204	226	204	226	0.99
4	12	4.9e-06	0.00051	21.0	4.7	1	23	236	258	236	258	0.98
5	12	7.1e-07	7.4e-05	23.6	3.5	1	23	264	286	264	286	0.99
6	12	1.1e-05	0.0011	19.9	5.3	1	23	292	314	292	314	0.98
7	12	0.00045	0.047	14.8	0.5	1	17	320	336	320	337	0.92
8	12	0.12	13	7.1	0.1	7	23	354	370	354	370	0.96
9	12	1.6e-05	0.0017	19.3	1.1	1	23	376	398	376	398	0.98
10	12	7.2e-07	7.4e-05	23.6	3.5	1	23	404	426	404	426	0.97
11	12	8.3e-08	8.6e-06	26.6	1.9	1	23	432	454	432	454	0.98
12	12	0.043	4.5	8.6	2.5	1	20	460	479	460	482	0.93

Sequence Information

Coding Sequence: ATGGTGGATATAGCAAGAACTTGTCGAACATGTATGAGAAGTAATTTGTCCTTAATTGATTTGTTTGGGCCAGTTAAAATCGAAGAAAACTGCACATTTAAATTAGCCGATGTTCTGGAGGCAACTACAGCTCTAAGTATTTCCAAAGAAGATGGATTACCACAGAGCTTATGTGATGAATGTGCCAAAATTCTTCAATTAATATACACTTTTCGGACCCAAGCTGTGAGTGTAGAAGCAGAGCTTAAGAGGCTTTTAGTTGCTGCAACACCTGTAAAAAATGAACAAGACATAGATTTAGATGACTGGAGCCACAGCTATTTAGACTCTTATGATTTACTCAATGATGTTGTACCAAAGAAGGAAAATGCGTCTGAACAATTTGTCTGCGAAGTATGTCAAAAAGTATATACCCAGGAAAAAAAGTTTTTAAAACATGTGCTGGCACATAAAAGTGGTAAATACAAATGCCCTACCTGTAACAAAAATTTCAGTAAAGAGTCTTCATTTAAAAGACATTTAGCGACACACTGTAAAAATGAACATTATGAGGTAGATTTGAAAAATGATGATGGTATATTAGTTGATGTAAAAATAGAAAATGCAGAATTCAAATGTTCCGAATGTCCAGAATCTTTTACAAAGGAAAAGGCTTTCTTATCTCACCTCAGGAAGCATAATGTTTATACTCAAGACGCAAAACCTTTTAAATGCGATCACTGTGATAAAAGTTTTACACGCAAAACAATATTAAGGAGACATATTAAGCTACATGCTGAGGAACAGCCTTTTAAGTGTCCAAAATGTTCAAAAACATATTCCCGTCAGGATCAGTTTCAGAGTCATGTAAGAAAACACAATGGGGACAAGCCTCACACTTGTCCTCACTGTTCAAAAGCATTTTCTCAAATATGCAATTTAAAAGATCACATCAGGATACACACAGGGGAAATACCATATCTATGTTCAGAGTGTGGGAAAGGATTCAACAACAGTTCCAATCTGAGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCAAAAACTTTTACTACCAAAGGTCAAATGGTTGGTCACATGACAACGCACACCGGTGCCCATCCGTACAAGTGTACAGAATGTGATTCAGCGTTTACTAAACCAAATTCCTTGAAGAAGCACAAATTAATACACTTGGGCATCCGGCCTTTCGCCTGTGACAATTGTAACATGAGCTTCACAAGTAAAGACCACCTGAAGCGCCACTACCGCATTCACACCGGCGAGAAGCCGTACCAGTGCAGCCATTGTGACCGCGCCTTCACACAGAGCAACGACCTGGTCAAACACATGCGGGGCCACGTGGGACAGAACTTGTACCAGTGTACATTCTGTCATATGAACTTTAGACTGATGCGAGAGTTGAAAAGCCACTATCCCGTGCACTACCTGAACGGTACAAACTCAACGACCATAGACAAAGACCTTCTACTGCTTAAAGATTGTGCAGAGAACCCCGAAGATAAGGTCAACCCGGACACCCGGATTACGATCACCTTTAATAACGACCCATACAAGGATGGAGTGGGTGATATAACCATAGACATTAGTCCGGATAAAAACACAAATACACTATGA
Protein Sequence: MVDIARTCRTCMRSNLSLIDLFGPVKIEENCTFKLADVLEATTALSISKEDGLPQSLCDECAKILQLIYTFRTQAVSVEAELKRLLVAATPVKNEQDIDLDDWSHSYLDSYDLLNDVVPKKENASEQFVCEVCQKVYTQEKKFLKHVLAHKSGKYKCPTCNKNFSKESSFKRHLATHCKNEHYEVDLKNDDGILVDVKIENAEFKCSECPESFTKEKAFLSHLRKHNVYTQDAKPFKCDHCDKSFTRKTILRRHIKLHAEEQPFKCPKCSKTYSRQDQFQSHVRKHNGDKPHTCPHCSKAFSQICNLKDHIRIHTGEIPYLCSECGKGFNNSSNLRXXXXXXXXXXXXXXXXXPKTFTTKGQMVGHMTTHTGAHPYKCTECDSAFTKPNSLKKHKLIHLGIRPFACDNCNMSFTSKDHLKRHYRIHTGEKPYQCSHCDRAFTQSNDLVKHMRGHVGQNLYQCTFCHMNFRLMRELKSHYPVHYLNGTNSTTIDKDLLLLKDCAENPEDKVNPDTRITITFNNDPYKDGVGDITIDISPDKNTNTL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00935012;
90% Identity: iTF_01178859;
80% Identity: -