Basic Information

Insect: Celastrina argiolus
Gene Symbol: -
Assembly: GCA_905187575.1
Location: LR994598.1:5385628-5390135[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3.2e-06 0.00033 21.6 0.7 1 23 174 197 174 197 0.97

2 15 0.19 20 6.5 1.5 2 23 200 221 199 221 0.92

3 15 2.6e-07 2.7e-05 25.0 1.0 1 23 228 250 228 250 0.97

4 15 3.9e-06 0.0004 21.3 3.3 1 23 256 278 256 278 0.98

5 15 1e-06 0.00011 23.1 0.8 1 23 284 306 284 306 0.95

6 15 3.6e-06 0.00038 21.4 1.0 1 23 312 334 312 334 0.98

7 15 0.00011 0.011 16.7 2.2 1 23 340 362 340 362 0.97

8 15 0.0014 0.15 13.2 1.4 1 23 368 390 368 390 0.97

9 15 0.00025 0.026 15.6 2.9 1 23 395 417 395 417 0.97

10 15 5.3e-06 0.00055 20.9 1.8 1 23 423 445 423 445 0.98

11 15 1.6e-07 1.6e-05 25.7 1.6 1 23 451 473 451 473 0.99

12 15 0.00041 0.043 14.9 4.7 1 23 479 501 479 501 0.99

13 15 5.3e-05 0.0054 17.7 0.2 1 23 507 529 507 529 0.97

14 15 0.00015 0.016 16.3 0.7 1 23 534 556 534 556 0.99

15 15 0.00022 0.023 15.8 6.3 1 23 562 584 562 584 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3.2e-06	0.00033	21.6	0.7	1	23	174	197	174	197	0.97
2	15	0.19	20	6.5	1.5	2	23	200	221	199	221	0.92
3	15	2.6e-07	2.7e-05	25.0	1.0	1	23	228	250	228	250	0.97
4	15	3.9e-06	0.0004	21.3	3.3	1	23	256	278	256	278	0.98
5	15	1e-06	0.00011	23.1	0.8	1	23	284	306	284	306	0.95
6	15	3.6e-06	0.00038	21.4	1.0	1	23	312	334	312	334	0.98
7	15	0.00011	0.011	16.7	2.2	1	23	340	362	340	362	0.97
8	15	0.0014	0.15	13.2	1.4	1	23	368	390	368	390	0.97
9	15	0.00025	0.026	15.6	2.9	1	23	395	417	395	417	0.97
10	15	5.3e-06	0.00055	20.9	1.8	1	23	423	445	423	445	0.98
11	15	1.6e-07	1.6e-05	25.7	1.6	1	23	451	473	451	473	0.99
12	15	0.00041	0.043	14.9	4.7	1	23	479	501	479	501	0.99
13	15	5.3e-05	0.0054	17.7	0.2	1	23	507	529	507	529	0.97
14	15	0.00015	0.016	16.3	0.7	1	23	534	556	534	556	0.99
15	15	0.00022	0.023	15.8	6.3	1	23	562	584	562	584	0.97

Sequence Information

Coding Sequence: ATGAGTACAGGCGTCTGTTTGTCGTGCTTCGCTTGTAATGTTAAAATATTTGATATTAAAGGCACCCACTTACATTATGTATTCGAAGAACTATCAAATTTTAAGATACAAACTGAAAAACATGAGTTGTGCTACATTTGTTATAAGAGGTTAATCCAATGTGAACACTTGGTCAAACAAATTCAGGAACTAAAAACTGATAATCAGGCAGAAGACAAACCTCTAATACCACTGACAAGAGTTAAAGTTGGACTATTCTCCCTGTACGATGATGTTCCTGTCCAGAAAGAGAAAAATATTTGGGAAGAATGTATTTATGAAGGTCGGGAAATTGGCGTTGACTATATCCATATCAAAATTGAGCCAAAAGATTCTGCGGATGACACAGATGAGATTGAAGAGGAGTGTTACGATGTCAAAGTAGAGCATGTGAGTGACGACGAAAAGGAAACATCGACGGAATCAGAGAACAATAAAAATGGGTCAAAGAAGCGGCAAAAAAAACCTGAAGAAAAGGAGTATGCGTGCGACCTCTGCAGCAAAAAGTTCAACCAGCCCGCATACCTCAAGAAACACATTCAACGGCTGCACGACAAGAGATGTGAAATATGCAAGAAGAAGTTCCTGACTTACAAACTGTTGGATGAACACAAATTGTTACACACAGAAGAAGGAAAGCCGTTTGTTTGTGAAGTGTGCACGAAGAGTTTTACACGCAGTGACAGTTTGAAAAAACATTTATTGTTACACCAAATCAGCAAACCGTACTCCTGTGATGTGTGTCACAAGAGATTCACCAGACCGGACACGTTGAAGAGCCACAAGCTGTCCCACAACGACGGTAGGACGTTCATCTGTGATATATGCAACAAGAAGTTTGCAAGGAACAGTGATCTTAAGAAGCACAAAGTGATACATACGGGGACCAAGCCGTTCAGCTGTGACCTGTGTGAAATGAAGTTTACTCAAGCAGGCAATTTGAAGAAACACAGACTGACTCATGAGACGGTTAAGGATTTTGTGTGTGATGTATGTAACCGCAACTTCACGTCTATTGGACATTTGAAGTCTCACAAGTCCTCTCACATGACTAATGAAATGTTTGCATGTGATGTTTGCAATCTACCCTTCCTCACCGTCAGCCATTTGAAGTCCCATAAGCGTACGCATATCCGTGAGCAGCACACCTGCGAGATATGCAATAAGAAGTTCCACGACATTGTGACCTTGGTGCGGCATATCAAGCTACATAAAGGGGAGCTGGCCTACAACTGTGATCAGTGCGAGAAGAAATTTGCCAAAAGCAGTTCCCTCATTAGCCACAAGAGAACGCATACGGGGGAAACGCCGTACAGTTGTGAGCTGTGCGACCGGAAGTTTGTCTACAGCAGCACCTTGAACAACCATATGCGTACACACACCGGCGAGAAGCCGTACAGCTGTGATATATGCGGGGAAACGTTCCTGCATTGCAGCTCGTTCAATATCCACAGAAGAACTCATACGGGCGAGAAGCCGTACAACTGTGATATATGTGGCAAGACATACACCGCTCTGGGCAGTTTGAACACACATAAGTTAATACATTCGGGCAAGCCTTACACGTGTGATGTGTGTGACAGAAAATTCCTGAGGATCAGCGGGTTGAAGTCCCACCAGCTAACGCATACGGGTGACAAACAACACAGCTGTGAGGTTTGCAATAGGACGTACTATCAGCTGCATAATCTAAACCGCCATAGACAAAAACATGGACACTTTGTTCAGACTATGGTCGAGATAAAAGTGGAAAATGATGTTATTAACTAG
Protein Sequence: MSTGVCLSCFACNVKIFDIKGTHLHYVFEELSNFKIQTEKHELCYICYKRLIQCEHLVKQIQELKTDNQAEDKPLIPLTRVKVGLFSLYDDVPVQKEKNIWEECIYEGREIGVDYIHIKIEPKDSADDTDEIEEECYDVKVEHVSDDEKETSTESENNKNGSKKRQKKPEEKEYACDLCSKKFNQPAYLKKHIQRLHDKRCEICKKKFLTYKLLDEHKLLHTEEGKPFVCEVCTKSFTRSDSLKKHLLLHQISKPYSCDVCHKRFTRPDTLKSHKLSHNDGRTFICDICNKKFARNSDLKKHKVIHTGTKPFSCDLCEMKFTQAGNLKKHRLTHETVKDFVCDVCNRNFTSIGHLKSHKSSHMTNEMFACDVCNLPFLTVSHLKSHKRTHIREQHTCEICNKKFHDIVTLVRHIKLHKGELAYNCDQCEKKFAKSSSLISHKRTHTGETPYSCELCDRKFVYSSTLNNHMRTHTGEKPYSCDICGETFLHCSSFNIHRRTHTGEKPYNCDICGKTYTALGSLNTHKLIHSGKPYTCDVCDRKFLRISGLKSHQLTHTGDKQHSCEVCNRTYYQLHNLNRHRQKHGHFVQTMVEIKVENDVIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00164569;
90% Identity: -
80% Identity: -