Basic Information

Insect: Celastrina argiolus
Gene Symbol: -
Assembly: GCA_905187575.1
Location: LR994600.1:1392510-1395896[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 7.6e-06 0.00078 20.4 4.3 1 23 126 148 126 148 0.97

2 17 5.8e-06 0.0006 20.8 2.8 1 23 153 175 153 175 0.98

3 17 0.00017 0.017 16.2 0.2 3 23 183 203 181 203 0.95

4 17 4.1e-06 0.00042 21.2 1.0 1 23 208 230 208 230 0.98

5 17 0.00014 0.014 16.4 0.4 1 23 236 258 236 258 0.96

6 17 6.2e-06 0.00064 20.7 4.0 1 23 263 285 263 285 0.99

7 17 6.1e-05 0.0064 17.5 3.6 1 23 291 313 291 313 0.98

8 17 1.3e-05 0.0013 19.7 0.7 3 23 321 341 319 341 0.97

9 17 1.4e-05 0.0014 19.6 2.1 1 23 347 369 347 369 0.99

10 17 0.0012 0.13 13.4 0.2 1 23 375 397 375 397 0.98

11 17 3.3e-06 0.00034 21.5 2.5 1 23 403 425 403 425 0.97

12 17 0.007 0.72 11.1 4.4 1 23 431 453 431 453 0.95

13 17 0.00011 0.011 16.8 1.5 1 23 459 481 459 481 0.95

14 17 7.8e-05 0.0081 17.2 0.9 1 23 487 509 487 509 0.97

15 17 1.4e-06 0.00014 22.7 1.6 1 23 515 537 515 537 0.98

16 17 3.5e-06 0.00036 21.5 3.1 1 23 543 565 543 565 0.99

17 17 1.9e-06 0.0002 22.3 4.8 1 23 571 593 571 593 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	7.6e-06	0.00078	20.4	4.3	1	23	126	148	126	148	0.97
2	17	5.8e-06	0.0006	20.8	2.8	1	23	153	175	153	175	0.98
3	17	0.00017	0.017	16.2	0.2	3	23	183	203	181	203	0.95
4	17	4.1e-06	0.00042	21.2	1.0	1	23	208	230	208	230	0.98
5	17	0.00014	0.014	16.4	0.4	1	23	236	258	236	258	0.96
6	17	6.2e-06	0.00064	20.7	4.0	1	23	263	285	263	285	0.99
7	17	6.1e-05	0.0064	17.5	3.6	1	23	291	313	291	313	0.98
8	17	1.3e-05	0.0013	19.7	0.7	3	23	321	341	319	341	0.97
9	17	1.4e-05	0.0014	19.6	2.1	1	23	347	369	347	369	0.99
10	17	0.0012	0.13	13.4	0.2	1	23	375	397	375	397	0.98
11	17	3.3e-06	0.00034	21.5	2.5	1	23	403	425	403	425	0.97
12	17	0.007	0.72	11.1	4.4	1	23	431	453	431	453	0.95
13	17	0.00011	0.011	16.8	1.5	1	23	459	481	459	481	0.95
14	17	7.8e-05	0.0081	17.2	0.9	1	23	487	509	487	509	0.97
15	17	1.4e-06	0.00014	22.7	1.6	1	23	515	537	515	537	0.98
16	17	3.5e-06	0.00036	21.5	3.1	1	23	543	565	543	565	0.99
17	17	1.9e-06	0.0002	22.3	4.8	1	23	571	593	571	593	0.98

Sequence Information

Coding Sequence: ATGGCAGAAGGGACGTGTTTTGTGTGTTTTGCTGAAAACACTGAAGTTTTTGATATCAAAAACACTAAGTTACAACTTGTTTACGAGAAAATATCGGAGTTGAAGATACTAAGTGACATATACTTTGTATGCAACATGTGCCGCTTGAGGCTACAGCAGTGTAGGTCATTAGAACAACAAAATAGTGAGCGGAAAGAAAGTGCAATTCAAACTGAACCCAGACCTATCATGCGATGGTTGTCTATGACTTTTGACATAACTTCTATTGAACCTGAGAATTCAATTGTCAAAGAAGAGGAATACGCTGGGCACAGTTCTTGCTGTACTACACCTGACGATCAGAAATCATTACTTATAACTATAACCCCAGTTACGTTTGCTTGCCAAATTTGTAACAAGAAGTTTGGTAGAAAACACAACTTAAAAACACACGAGAAGACACACAGTGGACAATTGTACACCTGTCATGCATGCAACAAAACATTCATACAGAAGAGTAGATTGAGGGTACACATAAGAGAACATGCAGGTGAGAGACCGTACGGTTGTCAGTTGTGTGACAAGACATTCGCTCGCGTTTACTTGTTGCGAGTGCACCAGACGGCCCATGTAGAGAAGAAATACAAGTGTGACATTTGCAGTAAGAGATTCAAACAGGAGAGATCTTTGGCGGCCCACAAACGAGCACATGCGGGTGACAAACCCTTCAGCTGCGGAATATGTGACAAAAGCTACTCTCAGAAGTCCATACTCAGGATTCACGAGAAGGCACACACTCGTAGCAGCTACCGTTGTAATACTTGCAATAAAGTGTTCACGCACATCAAATCGCTGGAAGTCCACAAAAGAACACATCTAGGTGACAAACCGTATAGCTGCACGATTTGTGATATGAAGTTCCGCCACAACACGTCGCTGCGATTGCACACCATGAATCACAACGGCGAGAAACCGTACGGCTGTGATCTGTGCGAGAAGAGGTTCCGTCAAAAGTCGGCCTTAAACGAGCACACGTTAACGCACACGGGCGAGAAACCGTACACGTGCGACGTATGCGGCCACAGCTACAGCGGCCGCGGGTACTTGAAGAAGCATAAAAGAATACATACGGGCGAGAAACCGTACACTTGCGAGGTGTGTTTCAAAAGCTTCACCGTGATCGGCATACTGAAAGACCACATGGCGACGCACAGCGGAGAGAAACGTCACAGCTGTGGCGTGTGCGGCAAGAAATTCTCCCAAAAAAAAAATGTGAGGGTCCACGAGCGGACGCACACGGGCAACAAGCCGTACACCTGCGACATTTGCTGCCGGTCCTTCTCGCACAAGAACGGCTTGCGCGCACACAAGACAGCCCACAGCACCAACAGACCGTACCTGTGCGTCGTCTGCAACAAGCGGTTCAAGTTGCTCGGCAACCTCAAACACCACGCGCGAATACATACCGGCGAGAAACCGTTCGTCTGCGAGGTTTGCGACAAAAAGTTCGGGCAACTCGGCACGCTGCACAAGCATAAGATCATACACACAAGCGACAGGCCGTTCTCCTGCGAGCTGTGCGACAAGCGGTTCAGCCAGCGGGGCTCGTTGGTGAAACACAACAGAACACATACAGGCGAGAAACCGTACGAGTGCGATATATGCCAACAGAAGTTCACGCAGAACTCCTCGCTCCATTCCCACCGGAGAATACATACGGGTGTCAAACCGCACACGTGTGAAGTGTGCTACAAGTCGTTTAACCAGAGCAGCTCGCTTAACAGACATAGGAAGACGCATATTAGTAATTATTAA
Protein Sequence: MAEGTCFVCFAENTEVFDIKNTKLQLVYEKISELKILSDIYFVCNMCRLRLQQCRSLEQQNSERKESAIQTEPRPIMRWLSMTFDITSIEPENSIVKEEEYAGHSSCCTTPDDQKSLLITITPVTFACQICNKKFGRKHNLKTHEKTHSGQLYTCHACNKTFIQKSRLRVHIREHAGERPYGCQLCDKTFARVYLLRVHQTAHVEKKYKCDICSKRFKQERSLAAHKRAHAGDKPFSCGICDKSYSQKSILRIHEKAHTRSSYRCNTCNKVFTHIKSLEVHKRTHLGDKPYSCTICDMKFRHNTSLRLHTMNHNGEKPYGCDLCEKRFRQKSALNEHTLTHTGEKPYTCDVCGHSYSGRGYLKKHKRIHTGEKPYTCEVCFKSFTVIGILKDHMATHSGEKRHSCGVCGKKFSQKKNVRVHERTHTGNKPYTCDICCRSFSHKNGLRAHKTAHSTNRPYLCVVCNKRFKLLGNLKHHARIHTGEKPFVCEVCDKKFGQLGTLHKHKIIHTSDRPFSCELCDKRFSQRGSLVKHNRTHTGEKPYECDICQQKFTQNSSLHSHRRIHTGVKPHTCEVCYKSFNQSSSLNRHRKTHISNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -