Carg011532.1
Basic Information
- Insect
- Celastrina argiolus
- Gene Symbol
- -
- Assembly
- GCA_905187575.1
- Location
- LR994577.1:16035015-16047247[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.022 2.2 9.5 0.1 2 23 262 283 262 283 0.95 2 19 0.091 9.4 7.6 1.2 5 22 291 308 288 311 0.89 3 19 0.011 1.1 10.5 1.5 2 23 435 457 434 457 0.94 4 19 0.004 0.42 11.8 0.1 1 23 463 485 463 485 0.97 5 19 0.0032 0.33 12.2 0.3 1 23 493 516 493 516 0.97 6 19 3.7e-06 0.00038 21.4 4.6 1 23 521 543 521 543 0.98 7 19 3.7e-06 0.00038 21.4 4.6 1 23 580 602 580 602 0.98 8 19 3.7e-06 0.00038 21.4 4.6 1 23 640 662 640 662 0.98 9 19 3.7e-06 0.00038 21.4 4.6 1 23 700 722 700 722 0.98 10 19 3.7e-06 0.00038 21.4 4.6 1 23 760 782 760 782 0.98 11 19 3.7e-06 0.00038 21.4 4.6 1 23 820 842 820 842 0.98 12 19 3.7e-06 0.00038 21.4 4.6 1 23 880 902 880 902 0.98 13 19 3.7e-06 0.00038 21.4 4.6 1 23 940 962 940 962 0.98 14 19 3.7e-06 0.00038 21.4 4.6 1 23 1000 1022 1000 1022 0.98 15 19 3.7e-06 0.00038 21.4 4.6 1 23 1059 1081 1059 1081 0.98 16 19 0.00023 0.024 15.7 1.2 1 23 1087 1109 1087 1109 0.97 17 19 3.9e-05 0.0041 18.1 1.9 1 23 1115 1137 1115 1137 0.98 18 19 4.1e-07 4.3e-05 24.4 0.2 1 23 1143 1165 1143 1165 0.98 19 19 0.0028 0.29 12.3 3.6 1 23 1171 1193 1171 1193 0.97
Sequence Information
- Coding Sequence
- ATGGAAGTGTTTTTATATAATTCCACGGTTTGTAGATTATGTGGTGAAGAAAATGATAATGGAACTTTCTTGTATTCTTCAGAAGAAAATAATCAAAATTTATGTAAAACAATTAACGCCTATTTGCCCATTAAGGTTGCAGATGATGGGCAATTACCTCGTACTATTTGTCCTGGTTGTACAATTCAACTTGAAGCCACCGTAGAATTTTTAAATCTTATAATAAATGGACAGAAAGTAATAAGAAAGCTGTATCAGAGAGAAAAAGAGTACAAAAGAAGTATATCTAAGGGTGCCAAGGATGGCGATGTTGAAGCTAACAATATTTTATATGAATTCAATTCAAGCAATGGTGTGTATCTGGTTGATCACCCGGCTTCATTACAAGTGGCAGGTCTCGAAAAACCTAAAAGGAAAAGGGGCAGACCACCAAAAAGTGTAAAAAAACTAGAAGTATCTACTGTCCAAAAGCCTGTGGAGTTGGTTAAAGATAACAATGAACAACAAAAAGAAGATGAGCCTTCTGGCAAAAGAAGGAGAAAGACACCCACAAGATATAAAGAAGCAGTTCAGGGTCCTGAGTTGGAGCGTATTTTAATTGAGGAGGGTGTGATAGATGCAGAAGAGAAAACAGCAACAAAGGGGGATACTTCACGGGTCCCAAAGGCTCCAGCTCCACCCAAAGAACCTCAAGTTATTGGACATCTGGAGTTTTCTGGAGAACCCATAGTGGTCCTGAGAAGTCGTGGAAGACCAAAAGGTCCATCTCGTCAGAAAAATGAGGAATGTCCAATCTGTGATTTAAAATTCACTTCAGTGGGGCGTTATATGTCGCACGTGGCACGGCATGGGCCAGTACAATATAAATGTGACTGCGGCACAGTCTTTGCTACAAGACAAAGTTTTTGTGACCACCAGAAGGAAACCGGACATAAAGGTCGTACTGTTGAACCATGCATCCAGCAGGAAGAAGAAGTAGAAACGAATACACTGAAGCCATCCGAAATTAAGGAGGAGATACTTTCCCAAGACAGTACAAGTCAAACGAGTACCGATGAGACAGTGACAGCTGTAGACAGTGCAGAGAACATGCAGGAATCAAATGATATGCTCACAGAAACTGAGAATGAACTGGAAAGTGAAATAGTGGAAATACAAGAGGAGGAAATAAATGTTGAAGGGGACTATGTCATAACTACCAGTGAAGAAAACAATGAAGTGAATATGGAACCAACGACAGAAATAACACTTCCAGATTTAGATATTGAAAATGAGACAGAAAAGAACGAAAAGCTTAAGTTGAAATGTCACTTCTGCCCTAAAATGTACAGCAGTAAACAAAGCAGGGCACTTCACATTAAGGCAGTGCACATGGGTGAGCGCGGGCACGTGTGCGGCGAGTGCGGCGCGCGGTTCGGCTACCCGCGCTCGCTGGCGCTGCACAGGATATCGCATCGCCGCGCGCGCAATCGGGGCTATGCCTGCGATCTCTGTGGAAAGGTGCTCAATCACCCGTCGTCGGTGGTGTACCACAAGCAGACGGAGCACGCGGCGCAGCGCTACGTGTGCGGCACGTGCGGCAAGTGCTTCCGCCACAAGCAGCTGCTGCAGCGACATCAGCTCGTGCACTCCGAGGTGCGCCCCTACGCGTGCAAGGTGAGTGTATATAGCTGCGGTGTAGGTGCCGCACCACCGTCGTCGGTGTACCACAAGCAGACGGAGCACGCGGCGCAGCGCTACGTGTGCGGCACGTGCGGCAAGTGCTTCCGCCACAAGCAGCTGCTGCAGCGACATCAGCTCGTGCACTCCGAGGTGCGCCCCTACGCGTGCAAGGTGAGTGTATATAGCTGCGGTGTAGGTGCCGCACCACCGTCGTCGGTGGTGTACCACAAGCAGACGGAGCACGCGGCGCAGCGCTACGTGTGCGGCACGTGCGGCAAGTGCTTCCGCCACAAGCAGCTGCTGCAGCGACATCAGCTCGTGCACTCCGAGGTGCGCCCCTACGCGTGCAAGGTGAGTGTATATAGCTGCGGTGTAGGTGCCGCACCACCGTCGTCGGTGGTGTACCACAAGCAGACGGAGCACGCGGCGCAGCGCTACGTGTGCGGCACGTGCGGCAAGTGCTTCCGCCACAAGCAGCTGCTGCAGCGACATCAGCTCGTGCACTCCGAGGTGCGCCCCTACGCGTGCAAGGTGAGTGTATATAGCTGCGGTGTAGGTGCCGCACCACCGTCGTCGGTGGTGTACCACAAGCAGACGGAGCACGCGGCGCAGCGCTACGTGTGCGGCACGTGCGGCAAGTGCTTTCGCCACAAGCAGCTGCTGCAGCGACATCAGCTCGTGCACTCCGAGGTGCGCCCCTACGCGTGCAAGGTGAGTGTATATAGCTGCGGTGTAGGTGCCGCACCACCGTCGTCGGTGGTGTACCACAAGCAGACGGAGCACGCGGCGCAGCGCTACGTGTGCGGCACGTGCGGCAAGTGCTTCCGCCACAAGCAGCTGCTGCAGCGACATCAGCTCGTGCACTCCGAGGTGCGCCCCTACGCGTGCAAGGTGAGTGTATATAGCTGCGGTGTAGGTGCCGCACCACCGTCGTCGGTGGTGTACCACAAGCAGACGGAGCACGCGGCGCAGCGCTACGTGTGCGGCACGTGCGGCAAGTGCTTCCGCCACAAGCAGCTGCTGCAGCGACATCAGCTCGTGCACTCCGAGGTGCGCCCCTACGCGTGCAAGGTGAGTGTATATAGCTGCGGTGTAGGTGCCGCACCACCGTCGTCGGTGGTGTACCACAAGCAGACGGAGCACGCGGCGCAGCGCTACGTGTGCGGCACGTGCGGCAAGTGCTTCCGCCACAAGCAGCTGCTGCAGCGACATCAGCTCGTGCACTCCGAGGTGCGCCCCTACGCGTGCAAGGTGAGTGTATATAGCTGCGGTGTAGGTGCCGCACCACCGTCGTCGGTGGTGTACCACAAGCAGACGGAGCACGCGGCGCAGTGCTACGTGTGCGGCACGTGCGGCAAGTGCTTCCGCCACAAGCAGCTGCTGCAGCGACATCAGCTCGTGCACTCCGAGGTGCGCCCCTACGCGTGCAAGGTGAGTGTATATAGCTGCGGTGTAGGTGCCGCACCACCGTCGTCGGTGTACCACAAGCAGACGAAGCACGCGGCGCAGCGCTACGTGTGCGGCACGTGCGGCAAGTGCTTCCGCCACAAGCAGCTGCTGCAGCGACATCAGCTCGTGCACTCCGAGGTGCGCCCCTACGCGTGCAAGATGTGTAACTCAAGATTTAAAACGAAACCAAACCTACTGAACCATCAGCTCCTACATTCAGGGATCAAAAAGTTTTCATGTGAAATATGCAAGGCCAAGTTTGCTCACAAGACAAGTCTCACGCTGCACATGCGCTGGCATACAGGTCAAAAGCCATTCGTGTGCGGCGTGTGCGGGAAGAGCTTCAGCCAGAAGGGCAACCTGTCGGAGCACGAGCGCATACACACGGGCGAGAAGCCGTTCGCGTGCTCGCTGTGCCCGCGCCGCTTCACCACGTCGTCGCAGCACCGCCTGCACCTGCGCCGCCACGCGCACGCGCACGCGTACCAGAACCTCAGGATACAAGTGGAAGATCCGGAACAAGAAGTCGTGATCGAATCGCCTCAGACGCAAATTACTGCTTTGAATAAAGTTAAGAAGCCGATAAGTCTGCTAGTGAACGAGTCGCAGCCGCGCGAGGAGGAGGGCGAGCAGGTCATATACGTCGCGTACGAGACCGCTGAGGGCATGCCCGCGTTCCACGTGCTCAATGAGCGGTCGGTAGAATTAGAGGAAGAAACCCCACAATCGTGCGAGTTATATTCCGGCTCGTCGCTCCTAGTGCCGTCCCAGCTTCAAACCCTGCATGCAGACCAAGAGGTATACCTGGAGAACCAACATCTGATCAATACCGATGAACTGGAAATGCAGCAAATGGAGATAGAGAATGATGAGATCGCGATAGAAGATGAACAGCTGGAGTTGGAGGATGTGCAGTTGGAATTGGAAGCCGAGGACATGGTTCTCGAGGAAGACATTGTTGAGGAGAAAGTGAGCATGGCGGACACTCATGTTAACTTCCGGGACGCTCGCGGGCCAGGGTTGCAGCTAACAATGCAAGACGGAACACGACTAGCACTCGCCTCGGTAGATGGTGGAGCGTTGCAGGTCATAACTCACGACGGACAAACCATCCCAGTAGAAATTAATGGATACAACGAAGAAGAGCAGGTTTCACATCATTCGGACAACATCCTGCAGCAATTGAATGTTGTAAAGAGCGAAGACTCCGAGAACGTTACCTACTACATCAGCAATGTGCCTAACTCTTGGAAGAAATAA
- Protein Sequence
- MEVFLYNSTVCRLCGEENDNGTFLYSSEENNQNLCKTINAYLPIKVADDGQLPRTICPGCTIQLEATVEFLNLIINGQKVIRKLYQREKEYKRSISKGAKDGDVEANNILYEFNSSNGVYLVDHPASLQVAGLEKPKRKRGRPPKSVKKLEVSTVQKPVELVKDNNEQQKEDEPSGKRRRKTPTRYKEAVQGPELERILIEEGVIDAEEKTATKGDTSRVPKAPAPPKEPQVIGHLEFSGEPIVVLRSRGRPKGPSRQKNEECPICDLKFTSVGRYMSHVARHGPVQYKCDCGTVFATRQSFCDHQKETGHKGRTVEPCIQQEEEVETNTLKPSEIKEEILSQDSTSQTSTDETVTAVDSAENMQESNDMLTETENELESEIVEIQEEEINVEGDYVITTSEENNEVNMEPTTEITLPDLDIENETEKNEKLKLKCHFCPKMYSSKQSRALHIKAVHMGERGHVCGECGARFGYPRSLALHRISHRRARNRGYACDLCGKVLNHPSSVVYHKQTEHAAQRYVCGTCGKCFRHKQLLQRHQLVHSEVRPYACKVSVYSCGVGAAPPSSVYHKQTEHAAQRYVCGTCGKCFRHKQLLQRHQLVHSEVRPYACKVSVYSCGVGAAPPSSVVYHKQTEHAAQRYVCGTCGKCFRHKQLLQRHQLVHSEVRPYACKVSVYSCGVGAAPPSSVVYHKQTEHAAQRYVCGTCGKCFRHKQLLQRHQLVHSEVRPYACKVSVYSCGVGAAPPSSVVYHKQTEHAAQRYVCGTCGKCFRHKQLLQRHQLVHSEVRPYACKVSVYSCGVGAAPPSSVVYHKQTEHAAQRYVCGTCGKCFRHKQLLQRHQLVHSEVRPYACKVSVYSCGVGAAPPSSVVYHKQTEHAAQRYVCGTCGKCFRHKQLLQRHQLVHSEVRPYACKVSVYSCGVGAAPPSSVVYHKQTEHAAQRYVCGTCGKCFRHKQLLQRHQLVHSEVRPYACKVSVYSCGVGAAPPSSVVYHKQTEHAAQCYVCGTCGKCFRHKQLLQRHQLVHSEVRPYACKVSVYSCGVGAAPPSSVYHKQTKHAAQRYVCGTCGKCFRHKQLLQRHQLVHSEVRPYACKMCNSRFKTKPNLLNHQLLHSGIKKFSCEICKAKFAHKTSLTLHMRWHTGQKPFVCGVCGKSFSQKGNLSEHERIHTGEKPFACSLCPRRFTTSSQHRLHLRRHAHAHAYQNLRIQVEDPEQEVVIESPQTQITALNKVKKPISLLVNESQPREEEGEQVIYVAYETAEGMPAFHVLNERSVELEEETPQSCELYSGSSLLVPSQLQTLHADQEVYLENQHLINTDELEMQQMEIENDEIAIEDEQLELEDVQLELEAEDMVLEEDIVEEKVSMADTHVNFRDARGPGLQLTMQDGTRLALASVDGGALQVITHDGQTIPVEINGYNEEEQVSHHSDNILQQLNVVKSEDSENVTYYISNVPNSWKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -