Carg013337.1
Basic Information
- Insect
- Celastrina argiolus
- Gene Symbol
- -
- Assembly
- GCA_905187575.1
- Location
- LR994578.1:10251539-10262237[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 1.7e-09 9.9e-06 26.1 1.7 4 44 2 38 1 38 0.93 2 8 6.8e-08 0.00039 21.0 0.4 5 44 52 86 48 86 0.91 3 8 5.3e-08 0.0003 21.4 3.3 3 43 112 148 110 149 0.91 4 8 9.3e-09 5.3e-05 23.8 3.0 3 44 162 202 160 202 0.96 5 8 0.0059 34 5.2 0.2 6 30 215 238 214 251 0.76 6 8 1.3e-13 7.4e-10 39.3 3.2 3 44 329 369 327 369 0.97 7 8 1.6e-12 9.3e-09 35.8 1.4 3 43 401 440 399 442 0.93 8 8 0.012 68 4.2 0.6 3 43 450 492 449 493 0.78
Sequence Information
- Coding Sequence
- ATGTGGACGTATTTTATGCGCACCTCGAACACGCGTGCGACCTGCAAGCTCTGCGACAAGTCCATGAGCAACAGCGGCGGCAATCTCATCAAGCATCTTAAAAAAATTCATAACAAGAGCAAAGGTACACGTTTTAAAGAAAGCTGGATTTTGGAATTCTTTGATGAATTACCGGATGAAACATTCCGGTGTAACCTGTGCAACATGACAATAAAGTCTAGTAATAACTGCTTGAGTCATATTAAGAGGAATCATCCAGTCTACTACGACAGCAAAACGAAAGTCACAGATGAAGAAAATACAGAACCAAATCCACAACTGAGACGTAGTTGGATGTGGAGGTACTTCGTGCGCAACTCGGACACGCGCGCGACCTGCAAGCTCTGCGACAAGTCCTTGAGCAACTGCGGCGGCAACCTTAATAAGCATCTTAAAAAAATACATTACAAGAGCGGAGAACCTGGTAGACCACGTCGCAGTTGGGTGTGGGCGTACTTTGTGTGCACTTCGGAGTCGCGCGCGACTTGCAAGCTCTGCGATAAGTCTGTCTGTTATGGCTACGGCAGCCCTGGCAACCTCAATAAGCATCTTAAGACTAATCATAACAAGGGCGAAGATGCTGCCCAAGATATTATATCTATGTACTTTACAAAGGAATCAGATGATCAACTTAAATGCAATATTTGTTCCATAGTATTGACAACGGACATTAAAAATACAGCACCTAAGGAGCATATTAAAGGCTCGCACAAAGACATATATGAGTTACACAAGGATATTTTAGAATGTTCTATGGGATACCAGATAGAGTTCCTACAGTTCAGTATGTCGGGGAGTAAAACTCAACCTGTAATACTAGAAGAAATATGTGAAACGCAATCTGAGGTTGTCCAAGATCAGTTGCCGAAAGATATGGAGGTTAAGCAGTATATATTACTGCGTAGTGTAAAAAGTGAAGATACAATATGTAGAAAACGCAGCTGGGTGTGGAAATATTTTGATAAGTTATCGAAAACAATATTCCGCTGTAACCTTTGCAATGTAGTTCTATCAATAAAGGGGTGCAACAGTAACAATATGAATCGTCATGTTCGATCGAGGCATCCAGTCGTTTACAATAGTGAAGTAGAGTTAAAAGTCAAGAATGACAACGAGAAGCGCCCAGATCCATTAAACTCTGGTAAGCCTCTACGGAGTTGGGTGTGGACTTACTTTACTCGCGACTCCAGAACTCGCGCCACTTGCAAACTGTGCGACAAGACCATCAGCCACGGAGGCAATGCCACCGGCAACCTCAACAGACATCTGAAGATCATCCACGACAAGAGCGATGATCACAACTGCTGGATTTGGAAGGTCTTTGATAATGACGATGGAAATTTTTATTCGTGCAAAATATGTCCATTCAAACTAACAAAGACAGATGACGAAGAGCTTTGTATGCAGATAATACTGGACCATTTAAAAAGTAAACACGAGTTAATATCAGCGGAGCAAATTTTTACCATACCAGATTATGAAGCGGAAGATGTAGAATAA
- Protein Sequence
- MWTYFMRTSNTRATCKLCDKSMSNSGGNLIKHLKKIHNKSKGTRFKESWILEFFDELPDETFRCNLCNMTIKSSNNCLSHIKRNHPVYYDSKTKVTDEENTEPNPQLRRSWMWRYFVRNSDTRATCKLCDKSLSNCGGNLNKHLKKIHYKSGEPGRPRRSWVWAYFVCTSESRATCKLCDKSVCYGYGSPGNLNKHLKTNHNKGEDAAQDIISMYFTKESDDQLKCNICSIVLTTDIKNTAPKEHIKGSHKDIYELHKDILECSMGYQIEFLQFSMSGSKTQPVILEEICETQSEVVQDQLPKDMEVKQYILLRSVKSEDTICRKRSWVWKYFDKLSKTIFRCNLCNVVLSIKGCNSNNMNRHVRSRHPVVYNSEVELKVKNDNEKRPDPLNSGKPLRSWVWTYFTRDSRTRATCKLCDKTISHGGNATGNLNRHLKIIHDKSDDHNCWIWKVFDNDDGNFYSCKICPFKLTKTDDEELCMQIILDHLKSKHELISAEQIFTIPDYEAEDVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -