Carg013383.1
Basic Information
- Insect
- Celastrina argiolus
- Gene Symbol
- -
- Assembly
- GCA_905187575.1
- Location
- LR994578.1:10360977-10361786[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-11 2.4e-08 34.2 0.0 5 37 1 33 1 37 0.94 2 2 5 3.4e+03 -1.5 0.0 16 23 78 85 76 87 0.85
Sequence Information
- Coding Sequence
- ATGTCCGCTGCTGTTGTAGCTGTCAGGGAGAAGAGGATGGGATACTTGAAAGCAGCGAAGCACTTCAACGTTCCCAGGACTACACTCCAACGATTGGTCAGTGACGAAAAATCTCCAATTTCATCATTAACAAGTAAAGTTCTTGGTCGAAAACCGATTCTAAATGTTAAGCTAGAAAACCTGCTGATTGAACACATACTGACATTGCAGAATCAACACCATAAACTGACTAAAATGGGCATACGGCGGTTAGCGTATGAGTTGGTTGTGAAAAATAATATAAAAAATCCATTTACGAAAGGCATTGCTGGCAAGGACTGGTTTAAACCATTCATGAATAGACACCCTGAAATATCGAGTGATGCAATGAGGTAG
- Protein Sequence
- MSAAVVAVREKRMGYLKAAKHFNVPRTTLQRLVSDEKSPISSLTSKVLGRKPILNVKLENLLIEHILTLQNQHHKLTKMGIRRLAYELVVKNNIKNPFTKGIAGKDWFKPFMNRHPEISSDAMR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -