Carg006330.1
Basic Information
- Insect
- Celastrina argiolus
- Gene Symbol
- -
- Assembly
- GCA_905187575.1
- Location
- LR994596.1:3552102-3554146[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.7e-13 5.9e-10 39.3 0.1 1 39 9 47 9 52 0.94 2 2 8.2 5.6e+03 -2.2 0.2 31 43 214 227 213 228 0.83
Sequence Information
- Coding Sequence
- ATGCCTCCCAAACGGGCATTGTGGTCAGAAGACAATCTGATCGCAGCTGTTAGAGCAGTACAAAGAGGAACTTTAAGTACGTATAAGGCTGCAGAGAGATATAAGATTCCTAGAAGAACAATTAGAAATCATCTGCAGTCTGGCAGTTTAAAGAAAAGTTTGGGACGCAAACCTATATTAAATAATGAAGAGGAAGCTCAACTTGCGCAGAGGATCATCCGCAATATCACGAGTGGCTTTAAAGCGACTGGCTTGTATCCTTTCAACCCACAGGCCATACCAGAAACAGCTTTTGCTCCTTCCATTTTAACGGAAGTTTCTGCACCAGATGGTGCACAAGAAAACGCACCAGCTCTTGAACATCCTAATGTTTCAGAATCCGGAGTTTCAACACCGTCTATTTTATCGGGAGCCTCAACGCCTGATCGTGATCAAGAAAATATACCACCTCTTAATAGTGATCAACAGAAGAGTTCAGAATCTACTACTAGTTCACCATCAATTTTGGCACCGATTCCAATACCCGATGTCTGGCTTACAAATATTTCACCTGTTGATTGTCTTCGACCTGCGACTCCAGAACAAACTAAGCAATCACCAGCTATAGCATCAACATCCACAAGTCAGGTCTCAAGAGAAACAACCGTGCAACGCAGCTATTATCGCACAATTTATGGAACAAGCTCCAGTTCAGATGAATCTGATGATGATTTACCTCTCAGTCAGTTGACAAAAAAAAACATTTATGATCTTATGCCTACGCCTGTTAAAGATCAACCATCCACACCGTCTGTTAGACGAAAAGCCATTAATTATCGAGGTACTCCAGTCACAAAAGATCTGTTTGATAAATATAATCAAGAGAAGAGAAATAGTAAAGAAGAGAAAGATAACAAAAGAAAGAAAAATAAACAAGACAAAAACTTTACTGATGTTGAAACAGGTAGAAAAGAAAGAACGAAGTTTAAAAAGGCTTTAAATCCTAAGAAAACTAAAGTCGTATCTGCAAAAAAGTCTACTACCGTCAAAGGGAAATCACAAAAACAAGGGAGTTGGTACTGCCATGCCTGCAAAGAAGATAGAAGAGACGCAATGCGGAAATGTTCACGTTGCTCTAAGTGGTACAACGAAGAGTGTGTCGGTTTGACTGCAGAAGACACTGATGACTTTCAATGTCCTGGTGGCTGTGAATAA
- Protein Sequence
- MPPKRALWSEDNLIAAVRAVQRGTLSTYKAAERYKIPRRTIRNHLQSGSLKKSLGRKPILNNEEEAQLAQRIIRNITSGFKATGLYPFNPQAIPETAFAPSILTEVSAPDGAQENAPALEHPNVSESGVSTPSILSGASTPDRDQENIPPLNSDQQKSSESTTSSPSILAPIPIPDVWLTNISPVDCLRPATPEQTKQSPAIASTSTSQVSRETTVQRSYYRTIYGTSSSSDESDDDLPLSQLTKKNIYDLMPTPVKDQPSTPSVRRKAINYRGTPVTKDLFDKYNQEKRNSKEEKDNKRKKNKQDKNFTDVETGRKERTKFKKALNPKKTKVVSAKKSTTVKGKSQKQGSWYCHACKEDRRDAMRKCSRCSKWYNEECVGLTAEDTDDFQCPGGCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -