Carg027703.1
Basic Information
- Insect
- Celastrina argiolus
- Gene Symbol
- ttk
- Assembly
- GCA_905187575.1
- Location
- LR994583.1:11347111-11352929[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.2e-16 2.9e-13 49.9 0.0 2 42 317 358 316 361 0.94
Sequence Information
- Coding Sequence
- ATGTCGCAGCAGTATAGTCTTCGGTGGAACAACCACCAACCAAATTTTATATCAATGTTCGAGACTCTGCTGACGACAAAGACATTAGTTGATGTTACATTAGCAGCTGAGGGTCAACATTTAGTGGCACATAAGGTGGTGTTGTCTGCTTGCAGTACATACTTTCATAGTTTGTTTGTTGACAATCCATCACATCATCCTATTGTGATTCTGAAAGATGTCACATTTGCTGATCTCCGCACAATGGTGGACTTTATGTACTATGGAGAAGTCAATGTTACTGAGGAGCAATTACCGCAGGTACTGGAGACTGCAAAAATCTTAAAAATCAAAGGGCTAACAGAAATGCCTGACTCAACATCTTTGACAAGATCACAGGGCTGTGCAGATTATACTGAGAACACAGAAACCCTAAGACAGTCTGCATCACCATGTTCACCTACTACAAGACGCAAAAGGCGACGCAAAAGTTCATCAAGCTCAATAACCAACGTCATAAATGATAATGTCAGAAATGAAGAATGCGAACAAAACATCAATATTGTGAGAGACTTGCCTCCTGTGACACTGAGCAGTTTACCCCAGCAAAAAAGGAGAGAAATAGAAGAAAGGATAGAAAATACGCAACAGACTGGTGAGCCGTCAAACATAAATATGGATCAACTAAACTTAGACGCAAACTCGGGAGTAATACCTCAAGGACAATGGAGTATGTTGGAGCATACATACCCCCGATATACGAACCCCTGCCTTGGGGGCGGCGGGCTGCCACCGGACCAGGGCATGTACCTCAATAACGTGATAAACACCGACGCCGACCTCAACAACTACGGCCAGCTGAGCCTCGCGGGCCCGGCGCCCGGCCCCAGCTGCGTCCCCGAGTCCCAGGCCGTTCAGCCCATGCAGCAGACGCCGCAGAAGAGACGCCGCACCACCAATCCGCAGGCGGAGGAGAACTTCCAGCGGGCGCTCGAGGCCGTCCGCTTCGGCGGCATCGGCTTCTGCAAAGCGGCGCGGCTGTTCGGCGTCAACAACAGGACGCTCTGGCTGGAGTACAAGAAGAAGGGATACCCGAACAATAGACCGAGCATAAAGAGCAGAATTAAGCGGGAGCACGTGACGCCCCCGCCGGAGCACAAGGACGAGCCGCAGCAGCAGGACCCGCAGATGGCACTGCTGTGTCCCCCGCACCCCGTGCCCGTGGGCTACATCGACCCCAGGCCCGTCGAGTTCCCGCTACAGGTCAGCAACTCGTTAAATTTAAATTTAAACGGGGTTAACTTCCCGATGCAATAG
- Protein Sequence
- MSQQYSLRWNNHQPNFISMFETLLTTKTLVDVTLAAEGQHLVAHKVVLSACSTYFHSLFVDNPSHHPIVILKDVTFADLRTMVDFMYYGEVNVTEEQLPQVLETAKILKIKGLTEMPDSTSLTRSQGCADYTENTETLRQSASPCSPTTRRKRRRKSSSSSITNVINDNVRNEECEQNINIVRDLPPVTLSSLPQQKRREIEERIENTQQTGEPSNINMDQLNLDANSGVIPQGQWSMLEHTYPRYTNPCLGGGGLPPDQGMYLNNVINTDADLNNYGQLSLAGPAPGPSCVPESQAVQPMQQTPQKRRRTTNPQAEENFQRALEAVRFGGIGFCKAARLFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHVTPPPEHKDEPQQQDPQMALLCPPHPVPVGYIDPRPVEFPLQVSNSLNLNLNGVNFPMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00403946;
- 90% Identity
- iTF_00288964;
- 80% Identity
- iTF_00288964;