Basic Information

Gene Symbol
ct
Assembly
GCA_905187575.1
Location
LR994582.1:11987044-12100718[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4e-27 5.8e-23 81.4 0.0 3 70 367 435 365 441 0.94
2 3 3.3e-32 4.6e-28 97.7 0.0 4 77 761 835 759 837 0.96
3 3 5.9e-31 8.4e-27 93.6 0.0 3 75 964 1037 962 1041 0.95

Sequence Information

Coding Sequence
ATGCACCCCACCGGCGCGGCCAGCCTGCCCGCCGCACCCGAGGCAGAGGTGCAAGCTATGCACTCGATGGACTGGCTCTTCAAGAAGGAAAGGATATATCTCCTAGCGCAGTTCTGGCAACAGAGAGCTACTTTGGCGGAAAAGGAGGTCACCACTCTCAAAGAGCAACTAGCAACGACCAGTCCTACGCCCTTACAAGCCACGATACCTCCGAAGACGAATGGCTCTCTCGTAGACTCCAGGAGGGACTCAGGCAAATTCAGTCCAGACATAAAAGAGGAAAAGAGAAGATCGCCCGACATTGATGAAGATATAGAACAGAAGATAGAAATGGCAGCCACAGCACGAAGTAACAGCAACTCGGCAAGGAGTAGTCCCGTTGTAAATACGGGAATCACTTTAGAAAATGAATTGGCTGCAAAAGAAAAAGAGATAGCACAATTAGTAGAAGACGTACGAAGACTGCAGGCCTCGCTGTCGGCGCTGCAAGAAGCTCATTCCCAGCAGTTACAGCGGTTAGAAGAGAGGTTAGACGAGAAGAAACAGCACATAGCACGTTTAGAAGCGCGCCTCGACACGCAGAGGGACTACGACGACATCAAACGGGAAATTAGCATGCTCCGATTTTCGGATATGGTCCCGACAGAGCGGCCAAACCCACACTCCCACAAAGAAATATTTGGACCCCAGAACCATTTACTAAGGTCTATGGACTTGGGACAAAACGACAGGGATCGGAAACCAGAACCCATTCGGTCGCCTTCCGCCCCCTCCCTTAGGGAAGAGAGGGACTCCGCCGAGCGCGAGCGAAGTACCGAGAGGCGAGACCCAGGTGGCGAGGAATGGGCGAGCACGCCGCCTCCCCTCAACAACAACACGACGCACCACAACAACAACGGCCCGCTGCCGCTGCCGCTTCCTCCGCCGAGCCCCTACCGTTTCGAGGAGCACAGGCCGTACAGATTCGCCGAAGACATGGGACCCCTCCCGCCCGGCGCTCTCGTTGGACGACTTGGCGATTCCCTCATACCCAAAGGAGATCCCATGGAGGCGCGCCTACAGGAGATGCTCAGATACAATATGGACAAATATGCCAATTCGAACTTGGACACCCTACACATAAGCCGACGGGTTCGGGAGCTGCTCTCCGTGCACAACATCGGACAGAGGCTATTCGCTAAATATGTGCTAGGACTATCCCAAGGAACGGTATCAGAATTGCTGTCCAAACCCAAGCCGTGGGACAAGTTAACGGAGAAGGGTCGGGATTCGTACCGCAAGATGCACGCGTGGGCATGCGACGAGGCCGCCATCATGCTTCTGAAGTCGCTAATTCCAAAGAAAGTTGGGACTAAAGATGGTACTGCCGGGGCTGGTTTTGGAAGATCAGAGAGTGACGGTGATGAGCGTTTGGCTCACATGCTTAATGAAGCCTCTCATATCATGAAAACCCCGACTTTACAAAGCAACAACGACGACTCCAGGAGCAATGATGACTCTAGTTCACCTCGAACCCAATGTCCGTCACCGTTCTCCAATAAGGAGTCAAGTCAAAACAGAAGGCTGAAGAAGTATGAAAATGATGACATTCCGCAAGAAAAAGTTGTCCGCATTTATCAGGAGGAGCTCGCCAAAATCATGACGAGGAGAGTAGAAGATATGCGACACAACCGAGACGGTTTCCCAGGTGGCGGCATGCCTCCGCACATGGAAAGGCCCCCTGAAGATATTCGGATGGCATTAGAAGCATATCATCGTGAACTAGCAAAAATCCAACCTGGCGGCAACATTCCAAATCTACATAACTTGCCCGGAATGCCACCCTTTCCTAATCTCCTTGCACTACAGCAGCAAGCCATGCAAGTGCAAAACCAACACATGAACGGATCAGGAGCTGTACAAGACCTGTCCCTTCCCAAAGAGAAGAGTAGTAAAGTAAATGGAATAACTGACAATGATAAAGAGAGGCACATGGACGCCGAAGAAGCTATCAGACATGCTGGAAGTGCATTTTCATTAGTGAGGCCAAAACTCGAGCCAGGACAGCAATCCACAGGCTCATCAGCATCAAGCCCATTAGGAAATGCTATTTTACCGCCAGCTATTACACCGAACGATGAATTTACTAGTTCGGCTGTGGCCAGCCCATTACAAAGAATGGCTTCCATCACAAATAGTTTAATATCACAACCACCAAATCCTCCGCATCATGCACCTCCACAGCGGTCTATGAAAGCTGTTCTTCCACCAATAACCCAGCAACAATTTGATCTATTTAATAATCTCAATACGGAAGATATCGTTAAGAGAGTAAAGGAAGCTCTTAGCCAGTATTCAATAAGCCAAAGGCTATTTGGAGAATCTGTTCTTGGTCTGTCGCAAGGGTCTGTAAGCGACTTACTGGCCAGACCTAAACCATGGCATATGCTGACTCAGAAGGGAAGAGAGCCGTTTATTAGAATGAAAATGTTTTTAGAAGATGACAATGCTGTACACAAACTGGTTGCATCACAATATAAAATTGCACCTGAAAAACTCATGAGAACTGGAAACTACAGTGGAGCACCGATTTGTCCACCGAATATGAACAAACCGATGCCACCTACACCGAAGATGTTATCGGACGCCACATCGCTTTTGAGCAAGATGCAACAGGAACAATTACTTAGCTCTGGGCATTTAGGACATTTAGGACAGCCTACACCACTTCTATTAACTCCGCCGGGCTTCCCTCCTCATCATGCGGTAACCTTGCCACCACAACATCACGACAATAATAACAAAGAACGAAAACCACAGCCACCACCTCAACCGCATCACCAGCCTTCTATAATGCGAAGTCTTCATCAACATATGTCGCCTAGTGTATATGAAATGGCTGCATTGACACAGGATTTAGATACACAAACCATCACAACTAAAATCAAAGAAGCACTGTTAGCAAATAATATTGGACAAAAAATCTTTGGCGAAGCCGTGCTGGGATTATCGCAAGGATCAGTTAGTGAATTATTATCGAAGCCTAAACCATGGCACATGCTCAGCATAAAAGGCAGGGAGCCGTTTATCCGAATGCAGCTTTGGCTTAGTGACGCTCATAACATAGATCGTCTTCAAGCATTAAAAAATGAAAGACGAGAAGCAAACAAAAGAAGACGCTCAAGTGGCCCCGGCCAAGACAACTCTTCTGACACGTCATCAAATGATACGTCAGAGTTTTATCACTCGAGTTCACCGGGTCCAACATCTGGTGTCCCTTCTGCTAAAAAGCAACGAGTATTATTCTCCGAGGAACAAAAAGAAGCATTGAAACTAGCATTCGCACTCGATCCATATCCAAATATGCCAACTATTGAATTCCTGGCGTCCGAATTAGGACTATCGACAAGAACGATAACCAACTGGTTTCATAACCACCGAATGCGCTTAAAACAACAGGCTCCTCACGGTCTACCGGCCGAGCCTCCAGCGCGAGATCAGTCTTCGGCACCCTTCGACCCCGTTCAATTTAGGCTTTTGCTAAATCAGAGGCTACTCGAATTACAAAAGGAAAGAATGGGCCTAGCGGGAGTGCCGCTCCCGTACCCGCCGTACTTCGCCGCGAATTCCAATTTCGCGGCCCTGATGAGTCGGGGACTCCTGCAGCCCGACGACCAGGGGAAGGACGTCGCCAGCGGCCTCGACCTGTCCATGCCGCTGAAGCGAGAGCCGGACGCGGACGACTTCGAGGACGACGACGTAGAGAGCAACCTCGGGTCGGAGGACTCGATGGACGAGGAATCGAAGACTGAGCCGAAGGCGGCGTCGACGCCCGCGAGCCGGTCGAGCCGGAGAAAACCGGTCGCGCCGCAGTGGGTTAACCCCGACTGGCAGGACGAGAAGCCGCGCAACCCCGACGAGGTGATCATCAACGGCGTGTGCGTGATGCGGAGCGACGACTTCCGTCGCGACCCCGAGCAGACCGTGCGCGTGGAGCCCTCGCCCGTGCCGCGGGACTCCTCCCCCGGCCCGCGCACGCCGCTCACCCCGCACACCCCGCACACGCCCGCGCCGCACACGCCGCGCCCGCCGCTCGCGCCCGACGTGCTGCCCGACGACAAAATCAAGACTGAGGCGGACGACGACCGGTGGGAGTACTAG
Protein Sequence
MHPTGAASLPAAPEAEVQAMHSMDWLFKKERIYLLAQFWQQRATLAEKEVTTLKEQLATTSPTPLQATIPPKTNGSLVDSRRDSGKFSPDIKEEKRRSPDIDEDIEQKIEMAATARSNSNSARSSPVVNTGITLENELAAKEKEIAQLVEDVRRLQASLSALQEAHSQQLQRLEERLDEKKQHIARLEARLDTQRDYDDIKREISMLRFSDMVPTERPNPHSHKEIFGPQNHLLRSMDLGQNDRDRKPEPIRSPSAPSLREERDSAERERSTERRDPGGEEWASTPPPLNNNTTHHNNNGPLPLPLPPPSPYRFEEHRPYRFAEDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNMDKYANSNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAIMLLKSLIPKKVGTKDGTAGAGFGRSESDGDERLAHMLNEASHIMKTPTLQSNNDDSRSNDDSSSPRTQCPSPFSNKESSQNRRLKKYENDDIPQEKVVRIYQEELAKIMTRRVEDMRHNRDGFPGGGMPPHMERPPEDIRMALEAYHRELAKIQPGGNIPNLHNLPGMPPFPNLLALQQQAMQVQNQHMNGSGAVQDLSLPKEKSSKVNGITDNDKERHMDAEEAIRHAGSAFSLVRPKLEPGQQSTGSSASSPLGNAILPPAITPNDEFTSSAVASPLQRMASITNSLISQPPNPPHHAPPQRSMKAVLPPITQQQFDLFNNLNTEDIVKRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPICPPNMNKPMPPTPKMLSDATSLLSKMQQEQLLSSGHLGHLGQPTPLLLTPPGFPPHHAVTLPPQHHDNNNKERKPQPPPQPHHQPSIMRSLHQHMSPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTSGVPSAKKQRVLFSEEQKEALKLAFALDPYPNMPTIEFLASELGLSTRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSSAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNFAALMSRGLLQPDDQGKDVASGLDLSMPLKREPDADDFEDDDVESNLGSEDSMDEESKTEPKAASTPASRSSRRKPVAPQWVNPDWQDEKPRNPDEVIINGVCVMRSDDFRRDPEQTVRVEPSPVPRDSSPGPRTPLTPHTPHTPAPHTPRPPLAPDVLPDDKIKTEADDDRWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2