Clyc013628.1
Basic Information
- Insect
- Cecropterus lyciades
- Gene Symbol
- pnr
- Assembly
- GCA_002930495.1
- Location
- MOOZ01001132.1:200425-205030[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6e-18 1.9e-14 53.6 4.1 1 35 26 59 26 60 0.97 2 2 2.6e-18 8.3e-15 54.7 6.0 1 34 80 112 80 114 0.98
Sequence Information
- Coding Sequence
- ATGGAAGATAGGGGAGTAAGTATGAAACGTTGTAAGCGATATGGCGTGCTGGAGGTGTACGAGGAGGGCCGCGAGTGCGTCAACTGCGGCGCCAACAACACGCCGCTGTGGCGCCGCGACTCCACCGGCCACTACCTCTGCAACGCGTGCGGCCTCTACCACAAGATCAACGGCGTCAACCGACCTCTCGTCAAGCCCAGTAAGAGGCTGTCGGCCGCGCGGCGACACGGGCAATGCTGCACGAACTGCGGCTCGCGCAACACCACGCTGTGGCGTCGCAACAACGACGGCGAGCCAGTCTGCAACGCCTGCGGCCTCTACTACAAGCTGCATGGAATCAATCGACCTTTGGCTATGAGAAAAGATGGTATACAAACGCGGAAACGCAAACCTAAGAAATCAGCAAATGGCGCGAAGCCCAACCAAGACTCCAGTAAAAAGGACGGTCACAGCTCCCCAGGTATTGATGAGAGCAAGCCGAGCATAGCGGAGGTGCCGCTGCCGCTGACGTCGGCGATGAGCCAGGCGGGCAAGCGCGAGGCGGCGGGCGCGCAGtacgcggcggcggcgggcggcgcgcccGGCGCCACCTTCCTCGCCAACCCCTCGCTCTTCAACATCAAGAGCGAGCCCAGCGCCGCCGCCGGCTACGAGGGCTACGCGCAGCACTCCGCCGCCGCGCCCTACCACTCGCACCAACATTACTTACATGCCCTACagTATGGTCTCAGCAACGGGGAAGAGGAGGAAGGTAGCGGATTTTTGCACCAGCGCAACGTGACGGCGCACGCCAAGCTCATGGCCTCGACGTAG
- Protein Sequence
- MEDRGVSMKRCKRYGVLEVYEEGRECVNCGANNTPLWRRDSTGHYLCNACGLYHKINGVNRPLVKPSKRLSAARRHGQCCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSANGAKPNQDSSKKDGHSSPGIDESKPSIAEVPLPLTSAMSQAGKREAAGAQYAAAAGGAPGATFLANPSLFNIKSEPSAAAGYEGYAQHSAAAPYHSHQHYLHALQYGLSNGEEEEGSGFLHQRNVTAHAKLMAST*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00971852;
- 90% Identity
- -
- 80% Identity
- -