Clyc016335.1
Basic Information
- Insect
- Cecropterus lyciades
- Gene Symbol
- -
- Assembly
- GCA_002930495.1
- Location
- MOOZ01001723.1:100863-107011[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.03 2.4 9.4 2.2 1 23 1641 1664 1641 1665 0.96 2 9 5.7 4.5e+02 2.3 1.5 2 23 1739 1761 1738 1761 0.91 3 9 0.025 2 9.7 1.5 1 23 1765 1787 1765 1787 0.98 4 9 1.2 99 4.3 2.8 1 23 1791 1813 1791 1813 0.95 5 9 4.1 3.3e+02 2.7 0.1 2 10 1819 1827 1818 1841 0.80 6 9 0.0023 0.19 12.9 0.0 2 23 1849 1871 1848 1871 0.96 7 9 0.00023 0.018 16.1 1.3 1 23 1877 1899 1877 1899 0.98 8 9 3.6 2.9e+02 2.9 0.0 5 21 1903 1919 1902 1920 0.93 9 9 0.035 2.8 9.2 1.9 2 23 1927 1949 1926 1950 0.93
Sequence Information
- Coding Sequence
- ATGTTACAATATCCCATGTGGATCTTGTTGTGTAGCGGACGTGTGGATGATAAGGAACAAGATGTAATAATCCTTGGAGACGTATCAATAGAGATAGAAAAACATATTCCAGAAAATGATGATGTTTTGTTACATATAGAAAATGACCCCCTTGCAACAGAAGATCAGGCTAATGAGAGTACAAGACAAAATAGCACTGAGAATATTGTTGAGACCTTAGAGCAAAATGATGTAAATAGTGATAACGCAAAGGTTGAACCAAATAAAGTAACTGATTTAAACAAGTTGGACACTggacaaaatcaaaataacgaTCAACATTTTGAGCAGAATATAATggacaatattcaaaatttaagttGTGGACCAAAGGAAAAACAAGATATTGATAATAAGACTGCTGAACAGACGATAAAACAAAATGCGAAATATTGTTGTAATCTAAGGAAAGAAgatattttaaggaaaatattcCAAACCCATAacagaatagaaaaaaaatttgaaattaagaaGACAGTTGCCAAACATGACATAAACAGTAAAGTATCGGtggaaaatataatagatacttTGAGGACTAGACGAAAAAGGTATGACTTACAACTTGAAGTGCCAAATGAAGATGATATGATGATAAGTAGACCTTTAAAACACAGAAGACATAGCGTTTTTGAGAAGGCTATACCGAAGACTGATTCTGATGGTCAAAATGAGGTATCAAAACGGCGCAAGAGTATTGATTGTAGCCAAATGAAAAGCGGGCACAATAAGATTGCCACAAAACAAAGTTATAATGATGTAGACGATGAAGATGATTATTCAGTAACTAATAAGCTATGCGATGATTGTTATAGACTTCCCCGCCCGAACGAAAAGGGGAGTAGCCCTATAAGACAAAGAAGACATAGCGTTTCTGAGAAAGCTTTACCGAAGACTGATTCTGAAGGTACTAGTAAGGCATCGAATCGGCGCAAAAGTGTGGATTGTAGCCAAATGAAAAACAGTGACAATAAGATTggcacaaaacaaaattataatgaagatGATTATCAAAATTCAGTAACTAATAAGTTATGTGATGTTAATTTTAGTCTTACAAACCCGAACGAAAAGGACAGAAATAgacctataaaaaaaaggagaCATAGCGTTTTTGAGAAGGCTATACCGAAGACTGATTCTAAAGTTAATAAAGAGATATCAAAACGGCGCAAAAGTGTGGATTGTGGACAAACGAAAAACGCTGTCAATAAGATTggcacaaaacaaaattataatgaagatGAAAATCAGTATTCAGTAACTAATAAGTTATGCGATGTTAATTTTAGTCTTTCCCGCCCGAACGAAAAGGAGAGAAATAgacctataaaaaaaaggagaCATAGCGTTTTTGAGAAGGCTATACCGAAGACTGATTCTGAAGTTATTAATGATATATCAAAACGGCGCAAAAGTGTGGATTGTGGCCAAACGAACAACGGTGACAGTAACATTgtcacaaaacaaaattataatgaagatGAACATCAATATTCAGTAACTAACAAGTTATGCGATGTTAATTTAAGTCTTCCCCGCCCGAACGACAAGGAGAGAAATAgacctataaaaaaaaggagatATAGCGTTATTGAGAAGGCTATACCGAAGACTGATTCTGAAGGTAATAATGAGGTGGCAAAACGGCGCAAAAGTGTGGATTGTGGCCAAGTGAAAAATAGTGCAAATAAGATTggcacaaaacaaaattataatgaaaatgaccATCAATATTCAGTAACGAATAAGTTATGCGATGTTAATTTTAGTCTTTCCCGCCCGAACGATAAGGAcagaaatatacctataaaaaaaaggagaCATAGTGTTTTTGAGAAGGCTATACCGAAGACTGATTCTGAAGGTACTATTAAGgcatcgaaacgacgtaaaagTGTAGATTGTGGCCAAATAAAAAACGGGGACAATGAGATTGGcacaaaacaaaattgtaaatcaAAGGGTCATTATACGTTTAAATGTCAGAGCAATGAAAAAAGCATTCCTGAACCAAGTGAAGTAAACGAAGCTGTCAATGCAGCTAACGAGAAAACAACTGATATCAATACAAGCGCTAAACAAGACGCTAACAATGTTGATAAAGATGAGACAAAACTAAAATATCAAGACTACGACCTTTTTAAGGGCCCCATAAAAACACAAAGGAATTTCAGAGAAGAACGAGAGGCTGAACTTCATCTTATGAAGCATCGAGAAACTGTACTGAATGCTATTAAAAACCAGAGAGCTGTAGTGAATGTTGTGAAAATTCCGGAGACTGAATTTAATCGTATGCGAAACAGTGAGCCTGAACCGAGTGACATGAAAAACGAAGAAACTGAACGAGAAAAATCTAATGCCAGTGCGTCCGGGAAAAGTATTCTGTCTGACCCTTTAGTAAATAgtcctttacaaaataaatcaaagaaaaGTGAAGAAAGTGGCACGAAAGATATTAGTATTGGTAATAGTGATAGAGACAATGAGAATTCTAGTCCGCagaagaaagtaaaaaaaaaggtttcttttCACCCGGATATAGTTACTAGGAGTCAATACCGCAAGAACATAGCAAAGGACGAGTCTAAACATAGCAACGCTGATGACAACCTTAACAAAGGGCCTAAAGAGATTAAAGGCATAGATGATCATAAACGTACGAGTCccagaaaaaataaacaaaataaaggtaGTAATAATGAGACTAAGGAATCTAGAGAAAAATCTGGAGTTGATCAGCAAAGTAAGAGTTGcagagaaaataaacataataaagctGATGATATCCAGGAAAAGGGATCTAGAGAAAAAAGTGGATTGGATCATCAAATTAGGAGTTCTagagtaaaaaaacaaaataaagcagATGGCATCCAGGACAAAGGATCTAGAGAAAAAAGTGGAATGGATTATCAAAGGCGGAGTTccagagaaattaaaaaaaataaagctgaTGCTAATCAAAACAAGGGATCtacagaaaacaaacaaaataaagctGATGATTATCAAAATAGGAGatctaaagaaaataaaaaagaaacagatcACCAAAGTAAGAGTTCCAgagaaaatatacaaagtaaggCTGGTGATAATACAGACAAGGGAACTaaagacaataaaaaattatccgATTATCCTAGTAAAAGATccagagaaaataataaaaatgaaacggaTGATAAACAAAAGCGAAATAGAGAAAATGAAACTTTAACAGATTATCAAAGTAAGAGTTCCAGGGAAAAGGAACAAAATATAACTGATGATAATCAAACCCTGGAAGAACAAAATCTAACTGAAGAGAATCAAAGTAAAACGGATTATAACACTCAGAGTCACGTAGATAAAAGAAGCGACGTTGACACTAACGGTCATAAGCGAAAATTTTCCGAAAATTATACAACTGGCGAACCTGTAGATAACTTAAATAGTAATACTGATAAAGAATTGGAGAACGTGAAAAATGATGTTCCTAATAATAAGCCTAGACGAAAGTTGCTAGACGATCTTAAGCTTAAAGAAagtcaaaaaaagaaaaagtatagtttttataatgaagCACCTATACAGCTTCGATCTATGGAGAAAGTAGAAACTGTTCTTAATATGCCCCATACACAAACGTTATTCgatgaaattaaatacaaacgttttattgatattgtaaAAGAGCATGATAGTAAAAGTGTCAAAGAAGGCAGCGGTGTTGATGTTTTCACTCCGCCTCTTCCTCCTAGGCGTAGGTTACCAGACGATCTCAAGTATAACAGTCAGGAAAAACCACacaaagatatttttgatgATCCAATTAGAGCAGGAGGTAGAAGACTTGAGCATATGGAATTTAGTAACTTTCTTGATAATTCTAAGGAAGAACAACGTAACGACATCTTCGATGATCCAATGAGACCAAAAAAAGATGGAAATCACGAATATAAGCGATTTAGAAGTAACTTACTTGGCGATCCTACAGAAGATAGGAGTTTGGATAAGGAAGAAGACTGCACTGTAAATGAGACTCTGCACCAGAAAAGAAAAGATAgtgattgtaatatttttaaggaccAAGTTCGGGAtgaaaaaagtagcaaacgtagtGACGATAAGGTGTCTAAGAGTGTTAGTATTGACAATAAAGATTCTGGTTGTGAGTTATTCGATGAGCCTAAAAACCAGGTTGCAAAAGAAAAGAAGACTGATAGCGATAAGCAAAAGAGAGAAGGTTTAGATAGTAAGGGTTCGGAAGATAAGCCAAAACGAAGCCAAAGAAGTGACAATGataaacattctaaaaatagaaGAGATATAAGTAGTGATAAAAAATGTTCGGACCGTAAGTCATCACAGGATACTAAAAATAAgacttttgaaattaaaaagaataatagtGATAATAAGCGTCGGGTTGACCGTGATTTGGAAGGTCAGAAAAAAGATAGAGCGAATGTTACTAAACATGGAAGCGTCAAAGATAAAAATAGTAAGGACGCAGTAAAAAGAAAGAGAAGCGAAGATATTACCGGAGATAAAAACAAACTAAGTTCCAGTCATGCTAACAATGATGTTGCTCCAAAAAGCGCAAAAAAAGCGAAAAAAGAGAGACAGGAAAGCACCACAAGTTCTTCGAGAAGTCAGTTTGATGATTTGCTTAAGGATGATACTGAACAGAAGAGCGAAGAAGAGAGCTTTAGAGCTAAAATATTAGAAGCGCGTGCTGTGGAGTCTGAAGATGAAGTTGACAAGCTAAATAAAAGACCAACAACTTCAGGACGGAGGCCTCAATTGGAATTCCATAAACACgttgataatataaaaacgaTCATGCGTTGGACAAACGCAACACCAATCCGTAGTTTTGCCAGTGTCGGATATGAGTGCGCCTTTTGCAACACGGTATACCATAAACCGGGCGATCTTAAAACCCACACGCTCGTAAACCACCACAGCTTTTCAAATGCCTATTTCGCTAAGAAAGCCGACATGACCACCTTCCTCGTCAAATTAGATATCACAGATTTAGAGTGCTATATATGcgctaaaaaaatacaaaacgtcAAAGATGCAATGAAACATCTCTCGATCGACCATAAGAAGAAATTGCACGGAGACATCAAGGACCACATAGTGCCGTTTAAGTTCGATTACAACGACTTGGACACGTTGACTTGTTTTATGTGTACCAGCAGGTACACTAGGTTCAAGATGCTTCTAGAACACACCGTCAGCACGCATTGCATGAACTACACTTGTAAGGAGTGTAACATGGGTTTTGTGAACACGAGGAAACTGCAATTTCATCTAAAGATTCACAATAAGACCTTCAAATGCGACTACTGTGACAGGACGCACGAAACACTTGCAAAGAAGAACGCTCACGAAAAGACACATCTAGCGAAAATCAGTCAGTGCTCATATTGTGGTGTGTCGTTCTTAGACGACACGAAAAGACTGCGCCATCTGGTGGAGGTACACGGCGTTGGTCAGCCGAGGATCGTTTGCAACGCGTGCGATCTCGTGTTCACTACGCAGGCTGATTACGCCATGCACATAAAGCGTGACCACTCGTTGGAGCGGAAGTACGAGTGCACCGAATGCCAGATGACGTTCTTCAAGAACGCGGCGTTGAAGTACCACATGCTGAAGCACACGGGCGATGTATGCTATCAGATGTTCTCGACGAAGGAAAATCCCACCCAACACATGCGGGGTAACGATGACAAGGGATTGACGTGCGAGCGGTGTGGCAGACGCTTCTTGACGAAAAATACGTGGCGTAAACACATGATAGAAGTTcatcatgaaaatatttag
- Protein Sequence
- MLQYPMWILLCSGRVDDKEQDVIILGDVSIEIEKHIPENDDVLLHIENDPLATEDQANESTRQNSTENIVETLEQNDVNSDNAKVEPNKVTDLNKLDTGQNQNNDQHFEQNIMDNIQNLSCGPKEKQDIDNKTAEQTIKQNAKYCCNLRKEDILRKIFQTHNRIEKKFEIKKTVAKHDINSKVSVENIIDTLRTRRKRYDLQLEVPNEDDMMISRPLKHRRHSVFEKAIPKTDSDGQNEVSKRRKSIDCSQMKSGHNKIATKQSYNDVDDEDDYSVTNKLCDDCYRLPRPNEKGSSPIRQRRHSVSEKALPKTDSEGTSKASNRRKSVDCSQMKNSDNKIGTKQNYNEDDYQNSVTNKLCDVNFSLTNPNEKDRNRPIKKRRHSVFEKAIPKTDSKVNKEISKRRKSVDCGQTKNAVNKIGTKQNYNEDENQYSVTNKLCDVNFSLSRPNEKERNRPIKKRRHSVFEKAIPKTDSEVINDISKRRKSVDCGQTNNGDSNIVTKQNYNEDEHQYSVTNKLCDVNLSLPRPNDKERNRPIKKRRYSVIEKAIPKTDSEGNNEVAKRRKSVDCGQVKNSANKIGTKQNYNENDHQYSVTNKLCDVNFSLSRPNDKDRNIPIKKRRHSVFEKAIPKTDSEGTIKASKRRKSVDCGQIKNGDNEIGTKQNCKSKGHYTFKCQSNEKSIPEPSEVNEAVNAANEKTTDINTSAKQDANNVDKDETKLKYQDYDLFKGPIKTQRNFREEREAELHLMKHRETVLNAIKNQRAVVNVVKIPETEFNRMRNSEPEPSDMKNEETEREKSNASASGKSILSDPLVNSPLQNKSKKSEESGTKDISIGNSDRDNENSSPQKKVKKKVSFHPDIVTRSQYRKNIAKDESKHSNADDNLNKGPKEIKGIDDHKRTSPRKNKQNKGSNNETKESREKSGVDQQSKSCRENKHNKADDIQEKGSREKSGLDHQIRSSRVKKQNKADGIQDKGSREKSGMDYQRRSSREIKKNKADANQNKGSTENKQNKADDYQNRRSKENKKETDHQSKSSRENIQSKAGDNTDKGTKDNKKLSDYPSKRSRENNKNETDDKQKRNRENETLTDYQSKSSREKEQNITDDNQTLEEQNLTEENQSKTDYNTQSHVDKRSDVDTNGHKRKFSENYTTGEPVDNLNSNTDKELENVKNDVPNNKPRRKLLDDLKLKESQKKKKYSFYNEAPIQLRSMEKVETVLNMPHTQTLFDEIKYKRFIDIVKEHDSKSVKEGSGVDVFTPPLPPRRRLPDDLKYNSQEKPHKDIFDDPIRAGGRRLEHMEFSNFLDNSKEEQRNDIFDDPMRPKKDGNHEYKRFRSNLLGDPTEDRSLDKEEDCTVNETLHQKRKDSDCNIFKDQVRDEKSSKRSDDKVSKSVSIDNKDSGCELFDEPKNQVAKEKKTDSDKQKREGLDSKGSEDKPKRSQRSDNDKHSKNRRDISSDKKCSDRKSSQDTKNKTFEIKKNNSDNKRRVDRDLEGQKKDRANVTKHGSVKDKNSKDAVKRKRSEDITGDKNKLSSSHANNDVAPKSAKKAKKERQESTTSSSRSQFDDLLKDDTEQKSEEESFRAKILEARAVESEDEVDKLNKRPTTSGRRPQLEFHKHVDNIKTIMRWTNATPIRSFASVGYECAFCNTVYHKPGDLKTHTLVNHHSFSNAYFAKKADMTTFLVKLDITDLECYICAKKIQNVKDAMKHLSIDHKKKLHGDIKDHIVPFKFDYNDLDTLTCFMCTSRYTRFKMLLEHTVSTHCMNYTCKECNMGFVNTRKLQFHLKIHNKTFKCDYCDRTHETLAKKNAHEKTHLAKISQCSYCGVSFLDDTKRLRHLVEVHGVGQPRIVCNACDLVFTTQADYAMHIKRDHSLERKYECTECQMTFFKNAALKYHMLKHTGDVCYQMFSTKENPTQHMRGNDDKGLTCERCGRRFLTKNTWRKHMIEVHHENI*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -