Basic Information

Insect: Cecropterus lyciades
Gene Symbol: -
Assembly: GCA_002930495.1
Location: MOOZ01002787.1:207098-211567[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0074 0.59 11.3 1.0 2 23 263 285 262 285 0.96

2 8 0.055 4.4 8.6 0.4 1 23 290 312 290 312 0.97

3 8 0.00025 0.02 16.0 0.9 1 23 316 338 316 338 0.98

4 8 0.0011 0.087 13.9 0.4 1 23 351 374 351 374 0.91

5 8 0.0025 0.2 12.8 1.5 1 23 378 400 378 400 0.98

6 8 0.00017 0.013 16.5 0.8 1 23 431 453 431 453 0.98

7 8 0.13 11 7.4 0.7 1 12 459 470 459 483 0.84

8 8 0.18 15 6.9 0.4 2 23 488 510 488 510 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0074	0.59	11.3	1.0	2	23	263	285	262	285	0.96
2	8	0.055	4.4	8.6	0.4	1	23	290	312	290	312	0.97
3	8	0.00025	0.02	16.0	0.9	1	23	316	338	316	338	0.98
4	8	0.0011	0.087	13.9	0.4	1	23	351	374	351	374	0.91
5	8	0.0025	0.2	12.8	1.5	1	23	378	400	378	400	0.98
6	8	0.00017	0.013	16.5	0.8	1	23	431	453	431	453	0.98
7	8	0.13	11	7.4	0.7	1	12	459	470	459	483	0.84
8	8	0.18	15	6.9	0.4	2	23	488	510	488	510	0.97

Sequence Information

Coding Sequence: ATGGCGAAGGTTGTGGACCTGCAAGCTGTCGTGAAACATATTGTGAACGGAAGTTTTAGCGATAGTTTGTGTCGAATATGTCTTTTGCCTTTGGGCGAATGTTACGAAGATGTTTtcacgaaagtttgtaaggaagGCAAAGAATACTGTATCGCAGACGTCCTGGATGCAATTTGTCAAGTGAAGGTTTCTTACACGGAACGATACAAAGTATGTTCAGAATGCTTTTTTGAAGCTTCGTCAGCTTATAAGTTCTACCTGCTAACCAAACACAGTGAAGAAATTCTTCAAAACTATGTCAGCGAACTGTACCAACACATTGGTTCTCTGGATGCACCTACAGAAACCAGTTCAGATTCCATATGTATCAAATTGCCAATTATTGTACCAAAAACAGAATTATTTGATTATGATTTGACAGGAATGTGCCTgcataataatgataaacaaTTTGAAGATTTGCAAACTGATGTGGATTCAGAAAAGAAGTTAGTAGCAGAATTGCAAAATAGGATAGGCTTGAAAATTGAGAAATTTGATGAATCAGATATACAGACTCAAATAACGAATACAAACGAGAACAACGATGATGACCTAGTTTTAATATTCCGAGATGACCATAAcgaatcattatattttaagccACAGAATGATGGCTCGTTCCTTCAGTTAACTAGCGAGCAAGCTAAGGAATACTATAATGGTTTTAATGAATCTAAGAATAGCGAAAAAGTTGCAAATTATTTACCAAAGAGACGTAGGAGAAGGAATCCTATGGATTATAAAAGTTGTAGTCGTTGCCCCATCAAATATAGATTTGTAGCAAAATTGAAAGAACATATGAAGACAGATCATAATGTTGATATGTTCTTTTGTAAGGTATGCAAGGCAATAATTGAAGATGAACAAGAGTTCAACAACCATTTGAAGACACACATGAATGTACACCGATGTTCAATATGCGACGCTGTTTTCAAGAAACGAGAAACAATTATCGCTCATCTAAAATCCCATGAAGCTATGAAGAAAATGAGACAATCCAAAGGTGCCCACGTCTGTGAAATTTGTGGGTGGATGCTGAAAGATGCAGCCAGTTTGAAAGAACATCATGAGGATAAGCATGTGAAGAAATATACGTGTTATTACTGCGGACGTATGTACAAGGGTGAAATGAGCTTTGATATGCACATCAAGAAACATGAATCGCTTATAAATTTGAAGCAAAAACGTGACTTAATATTCGGTAAGAAAGACCTACCAAAGGAGAAGCCAGCACCCAAGAAACGGAGGTATACTTGCAAGACTTGTTCCCGCAATTTCGTGGACGAACGCTCGCTTATGTGGCATGAACGGTTGCATACCGACGAGAGGCCTTATACTTGTGACGTATGCGGAAGGGGCTTCGTGTCGGTGAACCGCCGCAACCAGCACGCGCTGTGCGCGCACACCGCGCCCGCGCGGCGCTGCCCGCTCTGCCCCGCGCTGTTCCACCTGCGCTCCATGGTCAACACGCACATCAAGAAGGTACATCTACAAACACACAAGCGTCGCAGCCGCGCGAGCAAACACCAGAACGTGTTCTGGAAGACCGAGCCAGTGCCCTTTCAAGAGCTCAGCGTGGATGTCCAGAACGACATCCTGGAGCTGAAGACGGCGCAGCGGGAGAGGCTGAAGGGGGAAATGGTCAGTTGTCCTGTCGTGGACTGA
Protein Sequence: MAKVVDLQAVVKHIVNGSFSDSLCRICLLPLGECYEDVFTKVCKEGKEYCIADVLDAICQVKVSYTERYKVCSECFFEASSAYKFYLLTKHSEEILQNYVSELYQHIGSLDAPTETSSDSICIKLPIIVPKTELFDYDLTGMCLHNNDKQFEDLQTDVDSEKKLVAELQNRIGLKIEKFDESDIQTQITNTNENNDDDLVLIFRDDHNESLYFKPQNDGSFLQLTSEQAKEYYNGFNESKNSEKVANYLPKRRRRRNPMDYKSCSRCPIKYRFVAKLKEHMKTDHNVDMFFCKVCKAIIEDEQEFNNHLKTHMNVHRCSICDAVFKKRETIIAHLKSHEAMKKMRQSKGAHVCEICGWMLKDAASLKEHHEDKHVKKYTCYYCGRMYKGEMSFDMHIKKHESLINLKQKRDLIFGKKDLPKEKPAPKKRRYTCKTCSRNFVDERSLMWHERLHTDERPYTCDVCGRGFVSVNRRNQHALCAHTAPARRCPLCPALFHLRSMVNTHIKKVHLQTHKRRSRASKHQNVFWKTEPVPFQELSVDVQNDILELKTAQRERLKGEMVSCPVVD*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -