Basic Information

Insect: Cecropterus lyciades
Gene Symbol: -
Assembly: GCA_002930495.1
Location: MOOZ01000303.1:84381-91749[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.00057 0.045 14.8 3.0 1 23 641 664 641 664 0.92

2 7 2.9e-05 0.0023 18.9 3.7 2 23 681 702 681 702 0.96

3 7 0.00049 0.039 15.0 1.5 1 23 708 730 708 730 0.99

4 7 0.0044 0.36 12.0 0.3 1 23 747 769 747 769 0.98

5 7 6.6e-05 0.0053 17.8 0.3 2 23 776 797 775 797 0.97

6 7 2.1e-05 0.0017 19.4 3.8 1 23 803 825 803 825 0.97

7 7 0.045 3.6 8.9 2.2 1 20 831 850 831 852 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.00057	0.045	14.8	3.0	1	23	641	664	641	664	0.92
2	7	2.9e-05	0.0023	18.9	3.7	2	23	681	702	681	702	0.96
3	7	0.00049	0.039	15.0	1.5	1	23	708	730	708	730	0.99
4	7	0.0044	0.36	12.0	0.3	1	23	747	769	747	769	0.98
5	7	6.6e-05	0.0053	17.8	0.3	2	23	776	797	775	797	0.97
6	7	2.1e-05	0.0017	19.4	3.8	1	23	803	825	803	825	0.97
7	7	0.045	3.6	8.9	2.2	1	20	831	850	831	852	0.94

Sequence Information

Coding Sequence: ATGGACGGCTCAGTTGAAGCGTTTTGTAGAGGATGTTTAAATAACTTTGAAGATCCAACTGATTTATTGCAATACACTGAAAAAAGTCGAAGACTTTTCGTATATTCCACTGGAATACAGGTGAAAAGAAATGATGCCTTCACATTTCAACTTTGCAAGAATTGTTATAGTAATATGAGAAAATCatgtaaatttaagaaaatgtgtaggaggtcagataaaaaaattaaaagttacataTCCCTTAAAGACATTGATGATGACGATAATAATCTGGACTTCAGTACTTTTTTAAGAAGAAATGATGAGACCATTATGTTCAGATTGCCCATGTTAAGTGGAAGTAGTACACCTAATGATGAAGCTAAAGATGATGATAATGATTCAACATGTACAAGTATACAAAACTTCATGACTGACATGTTAAAACCTGAAGAGATACCGGATACAGAGGCTAGGATTATCAGGGAAGTGATTGAAGAGGAAGCTGATGTACTAGAGGACTCATTGGATTCACAATGGCTTCAAGATGACATTTCTAATGATAATGACTTTCAATTGAATCTCAGCCTCAGCCGATTTTCGACTCCTTATTCTACAAACAATGACCGCATGTACAGTTCTGACCATAGAGAGTTGACATCCACTGATATAACCTCAGGGGAAGATTATGATAACATGTTTATAAACAGTGCTTTAAAGCAAATTTCGGATGCTGTGCATACTTCAGAAGAGCTAGTGGAAGAAACGACAGTTTTGCAAAATGTGCTTGATGGTTGTGTTGAAAATGATGCAAAGGAAATGAGATGTGTCATAGATAAAAATCTTGAAAAGGCattaaaagatgaaaaaaataaggaattttCTCTGGAAGCATTATTGGCCTCACCAGtaaAACCAAATACATCTGGAGCTTCAACACccacaataaaatacatactctTTGGTGATAAGGTACCAAAAGAAAACAATACATCTAATTCTCCTAATTTTGAATCTGATTTAGATTTACTTATTGGAAAGTTAGATAGAGGAAAGTCTAATGAGGGAGATTTGCAGGGAAATTTTGATATGGGCGAGTTAAACATTAGCCAAACACCAGAAGGAAAATTAAACTTAGGCAAGGAATTAAATAAGGGAATGTTGGATATAAATTTCAAAGGGACAATTGATTTAGGAAATGATGGAAAATCAgagatagataaaataaatgtggGGAAAGTGCTTGAAGGCAAGCTAGATTTGAAGGACATTGCTCCAGAAAAGATACAAGAATCAAAACCCGATTTAGGAAATGTAAATGGCGGAAAATCAGATGCAGGGCAAGTAAACATTGATGTAggagactttaattttaaaaaaccaGCAGAGAAAAAAATCGATTTAGGGAAGTTAAGTATTGGCAAATTTAATATGGAAAAATTAAATCGAGAACAGATACAAAAAGGAAAGCTAAGTCCAGGAAAATTAAGTAAAGGAAAATTACATAACCATAAATTGTACTTGAATGAAATTAGCCTAGATCTTTTACTTGGcaaaaaatcaaaagaaaataatattggaaAAGAACAGCAtgataattttttacaaaaggGAAAATTTGGCAAGTCAAATAATACTGAATCTCAAGGTGAGGATAGTAATGCTGCGATTTTAGAAGAATTTCTCAATGCAGGAAAAGGAAAATCACCTAATATAGTGATAAAAGGTAAATCCCCTAGCAACACGGATAATGCTATTCAAATAGATGATGCCGAATTAACTGAATTACTACAAGAGGCTTTTGATCAAAATTTAGAATCAAAGGGCAAAAAATCCTTAAATGTTCAAGTTGATAAAGAATCTAATCTCAACATGCAAAAACCTTGccctgataaaaaaatcagttcgcccatagaaaaaaaatactgcataaCGAATTTCTACTGCAAAATGTGCAACAAAAAGTTCAGAGATCTAAAGGCTCTAAAGATTCATTTCGTCAAGTTTCATCAGCATAAGATCAGAACTCCATTGAAGCCCCGAACATaccatttaaatgtatgttatatgtGTGGACGAACATTTACAAGCAATAAAACACTTAAACATCATATCAAAAATCATCAGAAACCTACGGAGTACAAGTGTGAGAAATGTTTGCTAACATTCAAATCCGAAAATGCATTAAATACTCACAAACTAACTCACAGGAAAAAAACAACAGCACCGAAGGAATTGAAAGAAACAGACTcgaaaTATGTTTGCAATATTTGTGGAGCTGTCAGCACTTCAGCGTCTAACCATATAACACATGAAAGACGACATTCCAAGACATTCACAATATATTGTCAGGAGTGCGGTAAAGGTTTTTACAGGACAACAGATGTAGTGGTTCATATGAGGAAACATACGGGTGAAAAACCGTTTCCATGTTTGTATTGTGATCAAAAATTCTCTCGGCGCGACAGCCTTAACAGGCATCACAAACTACATacagGTGAAAAACTGTATGAATGTCAATACTGCTGCCAAAAATTTGCTAAACCATACGATTTGAAAAAACATGaagcaaaatataataatacatgtttGAAGCTTAGGGAATAA
Protein Sequence: MDGSVEAFCRGCLNNFEDPTDLLQYTEKSRRLFVYSTGIQVKRNDAFTFQLCKNCYSNMRKSCKFKKMCRRSDKKIKSYISLKDIDDDDNNLDFSTFLRRNDETIMFRLPMLSGSSTPNDEAKDDDNDSTCTSIQNFMTDMLKPEEIPDTEARIIREVIEEEADVLEDSLDSQWLQDDISNDNDFQLNLSLSRFSTPYSTNNDRMYSSDHRELTSTDITSGEDYDNMFINSALKQISDAVHTSEELVEETTVLQNVLDGCVENDAKEMRCVIDKNLEKALKDEKNKEFSLEALLASPVKPNTSGASTPTIKYILFGDKVPKENNTSNSPNFESDLDLLIGKLDRGKSNEGDLQGNFDMGELNISQTPEGKLNLGKELNKGMLDINFKGTIDLGNDGKSEIDKINVGKVLEGKLDLKDIAPEKIQESKPDLGNVNGGKSDAGQVNIDVGDFNFKKPAEKKIDLGKLSIGKFNMEKLNREQIQKGKLSPGKLSKGKLHNHKLYLNEISLDLLLGKKSKENNIGKEQHDNFLQKGKFGKSNNTESQGEDSNAAILEEFLNAGKGKSPNIVIKGKSPSNTDNAIQIDDAELTELLQEAFDQNLESKGKKSLNVQVDKESNLNMQKPCPDKKISSPIEKKYCITNFYCKMCNKKFRDLKALKIHFVKFHQHKIRTPLKPRTYHLNVCYMCGRTFTSNKTLKHHIKNHQKPTEYKCEKCLLTFKSENALNTHKLTHRKKTTAPKELKETDSKYVCNICGAVSTSASNHITHERRHSKTFTIYCQECGKGFYRTTDVVVHMRKHTGEKPFPCLYCDQKFSRRDSLNRHHKLHTGEKLYECQYCCQKFAKPYDLKKHEAKYNNTCLKLRE*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -