Clyc013603.1
Basic Information
- Insect
- Cecropterus lyciades
- Gene Symbol
- ZNF131
- Assembly
- GCA_002930495.1
- Location
- MOOZ01001130.1:61882-66334[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.021 1.7 9.9 4.9 2 21 126 145 125 146 0.93 2 17 0.085 6.8 8.0 5.2 1 23 177 200 177 200 0.94 3 17 0.068 5.4 8.3 0.5 1 23 205 227 205 227 0.95 4 17 5.5 4.4e+02 2.3 1.4 3 19 232 248 230 250 0.93 5 17 0.00028 0.022 15.8 1.4 1 23 263 286 263 286 0.95 6 17 0.0024 0.19 12.8 0.2 1 23 292 314 292 314 0.96 7 17 1.9 1.5e+02 3.7 0.3 1 23 348 371 348 371 0.84 8 17 0.27 22 6.4 0.2 5 23 382 401 380 401 0.94 9 17 1.4e-05 0.0011 19.9 1.0 2 21 507 526 506 527 0.93 10 17 0.0097 0.78 11.0 0.1 2 23 561 583 560 583 0.95 11 17 6.2e-06 0.0005 21.0 0.1 1 23 588 610 588 610 0.98 12 17 0.27 22 6.4 3.1 2 21 614 633 614 634 0.93 13 17 0.00017 0.014 16.5 1.7 1 23 660 683 660 683 0.95 14 17 0.00031 0.025 15.7 0.5 1 23 689 711 689 711 0.95 15 17 0.22 17 6.7 0.2 1 23 717 739 717 739 0.97 16 17 0.0052 0.42 11.8 0.3 1 23 745 768 745 768 0.92 17 17 0.0014 0.11 13.6 0.5 2 23 775 797 774 797 0.96
Sequence Information
- Coding Sequence
- atgaggAAAATAAATGAACTCGTACTATGGGCACAAACCGAGGTTAAGGAGGAGAGCGATCTGCCGCGAGGAATATGCCGCGAATGCTATGGGGCTGCCACCGCAGCGATACAGTTGAGGCAGCTGGCCAGAGAGTCGGCCCGGCAGTGGTCAGCCGCCAGTATCATGACCGCGAACATTCAAAACCCCAACAACACGGATGGTGCCTACTATATAATCTTTGGTGACACCATCACCTACATACGAGACCAGTCGAAGAAAATTTCTGACGTGTCTCGGGCGGTAAGGCGGCTGAATTGTGGTTATCAGGGTCCAGTTCCTATAGAGAAGACGAGGAAACGCCGGAGAAAAATCAACGGAGTGGCCGTGACTATCAAATGTTGTTACTGCAACATGTCGTTCCATACGCCGTATCACTTAAACCTTCATTTCAAAAGTTCAATGAAGCGCGCGTGTACACATTGTTCTACCCTCATGCAGAAGGAGAAGTTAGCCAAACATTTGTGGAAGGTTCATCACAAACACGTTTTCTCATGCAACTTGTGTCATGAGCTTTTTGATCATCAAAAAAGTTTGGACCGCCACACGCAGTTCAATCACGGACCAAATTCGCATCATTGTCAAACTTGCGGAGCTGGGTTTCCGATCGCGAGGGCTCTAAGGGCGCACGGGTACACTCACACGTTATTCGGCTGTCCATCTTGCAGCGCTAGCTTCGAGAATCGAAAATGTTACGAGTATCACAAGGGCCAGTGCAGAGAGCAGAAGCATCAACCGGAAAGTCTTTACGAATGCCACGACTGTGGAAGCAAGTACACGAAGAAACCGTCGCTAAGGATCCATATAATCCAGAAACATTTGAACGTTCTTCCATACGTTTGTCAAATATGTGGCAAGCGGAGTTCTAGCACGGGTCACGCAAAGGCCCACGAGGCGATTCACATGACGGAAAGGAAGGTGTATCAGTGCTACTGTGGGGCCAAAATGCGTACACATTTAGGATACCTTATGCATCAGAGGATTCATACTGGTGAGCGACCGTACGAATGCTCAGAGTGCGGTGATAGATTCCTATCAGCGTCGCGAAGATTGGACCATATAATGAGGAGACATAGGAGTACAAAAGACATGAAGCACGCGTGCCAGTGTGGTGCGAGATTCTTGAGGCCTTTCGAGCTAAAGAAACATCAGATTAGCATTCACGGCgTTAATGAAGAAACTTCATATCCTCAAGGGCTGTGCGTCGAGTGCACTAACACAGCAATCGCTGCCTTCGAATTTAGACTCTTCGTCCGAAAGTCTACCTCACTGTGGACCAGCTGTTTGAACTCCCTGTCAGTGCTACCTTCATCAGGATCATCCAAGTCCTTATATGCGGTCGTCAGAGATGACTTATCCCTTCAAAGTGTGAATGAGTTCACAGGAGACACCAAAGTATTACtagatatacttttaaataaattaaagagaaaaaaacgAACAGACAAGAAACCCAGAGGACGTACAGGACCACCCTGCACTTGCTCAGATTGTGGGAAATCCTTCCCTAGTCCCTATTATCTAAATATGCATCTCAAAAACAGTGGCCAAAAAGAAGCGTGTTGGTTTTGCGGCGCTGTACACATAAGAGGTCAAGAGATGAAAGATCAtctgtttaaaaaacattatgtgCAAGTTCAGTCGTGTCCGGACTGCCCGATGCTCTTCACTCAGGACATAGATCTcaaaatacatgtaaaaaacAGCCACAAACCCGGCGCGTTTACGTGTGGTGACTGCGGGCGAACGTTTCCAAGGCCGGCGTCCTTCGAAGCTCATTCCCAAATGCATGCGGTCCGAACTTGTAGGTCATGTGGCACTCAGTTCACTAATCGTGGATGTTACAGGGAGCACAGGAAGAATTGTGAGCCTGGAGCGAAACCTGATACAAAAATGGTGCCAAGGAACAAGCGATCCAACGTACGCGATCCAGCAACCTTCACATGTGATTATTGTTCCAAAACATACCACTCACGTCCTCAGCTGAAGAACCATATAATATGGATCCACATGGACGTCCGTCCCCATCAATGCCAATGGTGCGGGAAGCGGTTTTACACACCAGCTCGGTTAGCGGAACACACAGTGGTCCATACACGAGAAAGAAACTTCGAATGTGATTTATGCGGGCTAAAATTAGTCTCCAGAATGGCAGCGGTATACCACAGGCGGAGACATACGGGCGAAAGACCGTATGAATGCGAAGATTGTGGGGAAAGATTCATCTCTGCGTCCCGTAGGTCGGAGCATGGAAAGCGAAGGCACGGTAAAGGTTTACGAATGCAATGTATGGAATGTCCAGCCAACTTCGTCAGAGGCCACGAGCTACGAAAGCATATGGAGAAGGCGCATAGACCTCAAGAAAATGCTCAGTGTTTAGTTGATGTGAATGGATAA
- Protein Sequence
- MRKINELVLWAQTEVKEESDLPRGICRECYGAATAAIQLRQLARESARQWSAASIMTANIQNPNNTDGAYYIIFGDTITYIRDQSKKISDVSRAVRRLNCGYQGPVPIEKTRKRRRKINGVAVTIKCCYCNMSFHTPYHLNLHFKSSMKRACTHCSTLMQKEKLAKHLWKVHHKHVFSCNLCHELFDHQKSLDRHTQFNHGPNSHHCQTCGAGFPIARALRAHGYTHTLFGCPSCSASFENRKCYEYHKGQCREQKHQPESLYECHDCGSKYTKKPSLRIHIIQKHLNVLPYVCQICGKRSSSTGHAKAHEAIHMTERKVYQCYCGAKMRTHLGYLMHQRIHTGERPYECSECGDRFLSASRRLDHIMRRHRSTKDMKHACQCGARFLRPFELKKHQISIHGVNEETSYPQGLCVECTNTAIAAFEFRLFVRKSTSLWTSCLNSLSVLPSSGSSKSLYAVVRDDLSLQSVNEFTGDTKVLLDILLNKLKRKKRTDKKPRGRTGPPCTCSDCGKSFPSPYYLNMHLKNSGQKEACWFCGAVHIRGQEMKDHLFKKHYVQVQSCPDCPMLFTQDIDLKIHVKNSHKPGAFTCGDCGRTFPRPASFEAHSQMHAVRTCRSCGTQFTNRGCYREHRKNCEPGAKPDTKMVPRNKRSNVRDPATFTCDYCSKTYHSRPQLKNHIIWIHMDVRPHQCQWCGKRFYTPARLAEHTVVHTRERNFECDLCGLKLVSRMAAVYHRRRHTGERPYECEDCGERFISASRRSEHGKRRHGKGLRMQCMECPANFVRGHELRKHMEKAHRPQENAQCLVDVNG*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -