Basic Information

Insect: Cecropterus lyciades
Gene Symbol: -
Assembly: GCA_002930495.1
Location: MOOZ01000363.1:374914-378094[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.019 1.5 10.1 0.3 5 23 352 370 351 370 0.97

2 10 0.004 0.32 12.2 0.1 1 23 376 398 376 398 0.95

3 10 2.3e-06 0.00019 22.3 1.5 2 23 432 453 432 453 0.98

4 10 0.0034 0.27 12.4 4.1 1 23 459 481 459 481 0.99

5 10 0.00036 0.029 15.5 1.0 1 20 485 504 485 506 0.94

6 10 0.00019 0.016 16.3 0.1 1 23 539 562 539 562 0.96

7 10 9.8e-06 0.00079 20.4 0.3 1 23 584 606 584 606 0.98

8 10 5.2e-05 0.0041 18.1 4.3 1 23 612 634 612 634 0.98

9 10 0.0028 0.22 12.7 0.3 3 23 642 662 640 662 0.98

10 10 1.3e-05 0.0011 20.0 0.8 1 23 668 691 668 691 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.019	1.5	10.1	0.3	5	23	352	370	351	370	0.97
2	10	0.004	0.32	12.2	0.1	1	23	376	398	376	398	0.95
3	10	2.3e-06	0.00019	22.3	1.5	2	23	432	453	432	453	0.98
4	10	0.0034	0.27	12.4	4.1	1	23	459	481	459	481	0.99
5	10	0.00036	0.029	15.5	1.0	1	20	485	504	485	506	0.94
6	10	0.00019	0.016	16.3	0.1	1	23	539	562	539	562	0.96
7	10	9.8e-06	0.00079	20.4	0.3	1	23	584	606	584	606	0.98
8	10	5.2e-05	0.0041	18.1	4.3	1	23	612	634	612	634	0.98
9	10	0.0028	0.22	12.7	0.3	3	23	642	662	640	662	0.98
10	10	1.3e-05	0.0011	20.0	0.8	1	23	668	691	668	691	0.96

Sequence Information

Coding Sequence: ATGGATTCCTGGTCGAATTTGTGTCGGTGCTGTCTATCCCCAGATTCAAATGTGTCGTTATTCGATGAGAAACAAAATGTTAAAGAGAAGTTCTTTGAGCTGACCACTATTAAGGCAAACAAAGATGATGGGTTGCCACAGAAGCTTTGCGTCGAGTGTTTCACCATATTAAATTCAGCGTATCAGTTCAGGGTGCAATGTATGAAAATGGATAAAGAACTAAAAGTTCAATTAGATgccttattaaaacaaaataaagaagagCATTTTGTTCTAGACCTGCCTGATATTAATGAGAAAGGTAAGGAATTAACTATAGAGGATATAGCTAAAGAATCCATGAAGCAAATAGAGGCAATGATCAAGACTGAACCGAATGATAGTGATGATGATTGCTATTACGTACTAGTCATTGATGATCAGAAAGATAGTGAAAAGGAAAACAAAAAGGAAGAACTTCTGCATATAAAAACCGAACCAAATTTCGAAGATCCTACAGAACATAATGAGACTGAAGACCAAGatggaaattttgaaaatagcaTAGATTCATTTTTAGTATCAAATCCTAGTGTATCGTTTAACGTACCTGCAACTATTCTGGAGAATGAAGATGAAAGTCAGGCTCATGATGAACAAACTGAAATGAACGTTGATGATGCTGATGAAACATCCCAAGGACAAATTGCTGAAATGGATGATTCCCAACTCGGCAATCGTCAAGAGTTGATGACAATTGGTGATGATATCATAGTCAAGGATATATCAAGTTCTAGTaacattatcaaaatattaactacGTCAGGATTAGAGAGAACCATACTACTTAATAGCAAAGAAGGAGTGAAGTATCTCACAGACTCACAGTTGAGTACAGTAGACGATGGAGACTCGTCAACTCAGCAGGAATTCATTTTGTATGAAGGTGACGATTCATCTCAGTCGCAGTTTCAAATATTGAAGTGTGATGGTTCAGAACTAGTTATAGAGTATGCTGATGATAGTCAAATAGCATCAGCAGTTTTACAACAAGTAGATGGGCTGTATTTATGTGACTGTGGGGAAAAGTTTGAAGACTTGGAAGAGTATGAGAAACATAAACAAAAGCACAATCCTGCTGGGGAGTATTTATGTAATCTCTGTGGTAAAGGATTTGAGACAGCAGAGATTTTGAAAGGACATATGCTTCTCCATTCTGTGACTGGTTTGTTCGTTCCTTGTCCATTCTGCAGTCAATTGATAAAAAGAAATGCCTTGACTCAACATATTAAGTATGGCCATAACTTCAAACCACGCTGCAACCTATGCTTGAAAACATTTGCCAACCAAAACAATTTGAAACGTCATATGATGATTCACACAGGAATAAGGGAGTTTCAGTGTGACATCTGTTTGAAGAGGTTCCATCAGAAAATAACAATGCAGACCCATAGATTAACACACATAAATCCCTTCTCGTGTAATCAATGTGACATGAcatttgataacaaaacagcttTAACAGCTCACAAGCATTCAGATGAGTGTACTAAATCTAAAGTCACTAAAGTTAAAGAAGAATTAATTAAGACAGTAAAGCAGGAGATCACAACTGATATGGGGAAACTGTTAGGTTACGCATGCTCGCTCTGCAAGAGAATGTTTTCAGTAGAATCAGCATTAATACAACATATAGAAAGCACGCATATGACTGAAACAGGTGATGTGCCAAACGCAGATAAGAACTTAAGAGGGAAGCTTCTTAAGAGATTTGAGTGTAGCATATGTGGGAAGAGCTGTGCCAGTCAAGCTATGCTAATAATGCATGAAAGAGTTCATACAAATGAGAGGCCTTATCCATGTCAATTGTGCTCATTAAGatttaaaaccaaaacacatTTAAGAACACACCAACTTACTCATACGAGAGAAAAGAAATTTGGATGTTCTGTTTGTATGAAGTTCTTTGCTCTAAAAGGTAATCTTGTTGTTCATCTAAGAACGCATACAGGGGAGAGACCATACGTGTGTTCTATATGTGACGAGGCCTTTATAGATTCTAAGTATCTGAAAAAGCATAAGTTAAAGAAACATGCTATAGATAATGTAGCTTGGAACAAGTATTAA
Protein Sequence: MDSWSNLCRCCLSPDSNVSLFDEKQNVKEKFFELTTIKANKDDGLPQKLCVECFTILNSAYQFRVQCMKMDKELKVQLDALLKQNKEEHFVLDLPDINEKGKELTIEDIAKESMKQIEAMIKTEPNDSDDDCYYVLVIDDQKDSEKENKKEELLHIKTEPNFEDPTEHNETEDQDGNFENSIDSFLVSNPSVSFNVPATILENEDESQAHDEQTEMNVDDADETSQGQIAEMDDSQLGNRQELMTIGDDIIVKDISSSSNIIKILTTSGLERTILLNSKEGVKYLTDSQLSTVDDGDSSTQQEFILYEGDDSSQSQFQILKCDGSELVIEYADDSQIASAVLQQVDGLYLCDCGEKFEDLEEYEKHKQKHNPAGEYLCNLCGKGFETAEILKGHMLLHSVTGLFVPCPFCSQLIKRNALTQHIKYGHNFKPRCNLCLKTFANQNNLKRHMMIHTGIREFQCDICLKRFHQKITMQTHRLTHINPFSCNQCDMTFDNKTALTAHKHSDECTKSKVTKVKEELIKTVKQEITTDMGKLLGYACSLCKRMFSVESALIQHIESTHMTETGDVPNADKNLRGKLLKRFECSICGKSCASQAMLIMHERVHTNERPYPCQLCSLRFKTKTHLRTHQLTHTREKKFGCSVCMKFFALKGNLVVHLRTHTGERPYVCSICDEAFIDSKYLKKHKLKKHAIDNVAWNKY*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01359991;
90% Identity: iTF_01359991;
80% Identity: -