Basic Information

Insect: Cecropterus lyciades
Gene Symbol: -
Assembly: GCA_002930495.1
Location: MOOZ01000327.1:325741-331435[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 6.1e-05 0.0049 17.9 6.1 2 23 198 219 197 219 0.97

2 12 0.00014 0.012 16.7 3.5 1 23 226 248 226 248 0.99

3 12 0.00026 0.021 15.9 1.1 2 23 271 292 270 292 0.98

4 12 4.8e-06 0.00038 21.4 1.5 2 23 300 321 299 321 0.95

5 12 0.00028 0.022 15.8 0.4 1 23 327 349 327 349 0.98

6 12 2.9e-06 0.00024 22.0 3.1 1 23 355 377 355 377 0.97

7 12 1.6e-07 1.3e-05 26.0 1.3 1 23 383 405 383 405 0.96

8 12 7e-05 0.0056 17.7 0.4 1 23 411 433 411 433 0.96

9 12 0.00031 0.025 15.6 1.2 1 23 439 461 439 461 0.96

10 12 0.0056 0.45 11.7 8.5 1 23 467 489 467 489 0.98

11 12 9.1e-07 7.3e-05 23.6 0.8 1 23 495 517 495 517 0.99

12 12 1.9e-05 0.0015 19.5 2.3 1 23 523 545 523 545 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	6.1e-05	0.0049	17.9	6.1	2	23	198	219	197	219	0.97
2	12	0.00014	0.012	16.7	3.5	1	23	226	248	226	248	0.99
3	12	0.00026	0.021	15.9	1.1	2	23	271	292	270	292	0.98
4	12	4.8e-06	0.00038	21.4	1.5	2	23	300	321	299	321	0.95
5	12	0.00028	0.022	15.8	0.4	1	23	327	349	327	349	0.98
6	12	2.9e-06	0.00024	22.0	3.1	1	23	355	377	355	377	0.97
7	12	1.6e-07	1.3e-05	26.0	1.3	1	23	383	405	383	405	0.96
8	12	7e-05	0.0056	17.7	0.4	1	23	411	433	411	433	0.96
9	12	0.00031	0.025	15.6	1.2	1	23	439	461	439	461	0.96
10	12	0.0056	0.45	11.7	8.5	1	23	467	489	467	489	0.98
11	12	9.1e-07	7.3e-05	23.6	0.8	1	23	495	517	495	517	0.99
12	12	1.9e-05	0.0015	19.5	2.3	1	23	523	545	523	545	0.97

Sequence Information

Coding Sequence: atgaatccTGAAAAGATTAATAATTTCGACTACTGTTGCAGAACCTGCCTTAACGCTTCTAATCATACATACAGTATATTTTCTGAAATAGGTCATAGGTTAAGTGTCGCTGATGTTATAAACAAGGCTACTACTTTAGATATCAACAAAGAAGATACtctaccaaaaaaaatatgtaccaaatgctttatttgcataaaaactTTTCATGAATTCTGTGAATTTGCTAATGCTGTTGATGTCACATTAAAGCAACAGATAAAATGTGAAAGCAACATATACAACAATAAGCTCTCAATAGAAATGttgaagaataataataaaatctcatCAGAAATGTTAGAGAATAATAAATTCTCTATAGAAATGTTTAAGAGTGATAAAACAACAGAACATTTAGAGAATAACCCATTGAATGAAATTAAGTTGGAGCATGATactgatgataatgataatcaTTTATCAGATCTAGATATTAAAGTAGAGGTTAATCCTCAAAATGGTCACGATCCTGAACctttaaatgcaaataataatattgaaaatattgaagtattaatagattctaatgaaatattaactaataagcTAAAATGTGAGTTGTGCAATAAGAAATTTAGGAAACTATCAAATCTAAACCATCATAAGAAGAAACATGATGCACAAATTAAATCTTACACATGTGATGTTTGTCTGAAGACATATACAGATCATGATAAATTTGTTAGGCATTTGAAAACACATCAAGTACACATTAATGGAGACAAGGAAAGTATAAAGAAGACTCATAGCATAGAACATATAGAACAAAAGTGTCAAGTTTGTTCTTTAAACTTCCAGTCTAAGAATGCTTTATCGGCGCATATGAGGAAACATGCAAAAAAAGGCAGAGTCTTATCATGTTCCGTATGTGGCAAAGTTTTCGCCAAAACAAGCCATTTGAAGAGACATGAGTTGTCTCATGATGTCAATCATCCTTACAAATGTTCCTTATGCCCAAAGACTTTTGCTGTAGAAAACACTTGGAAGGAACATGTTAATAAGCATAATGGTATCAAACCACATCCCTGTCCAATGTGTTCAAAGTCTTTTTCGCATTTGACAACTCTAACTACACATATAAGGATTCATATAAAAGAAAAGCCGTACTTATGTCCAACCTGTGGGAAGAGATTTGATTCTAGCACAAACTTAAATCAGCATATGAAGAGGCATCAAGGGTTAAAACTGTTTGCTTGTACATTATGTCCTAGAAAGTTTGTTAGCAAAGGTGAGCTCAAATCCCACAACATAACGCACACAGGTGAAAGGTCATTTGCATGCGAGCAGTGTGGTTCAACCTTCACCAAGAGGACGTCCCTCGCGAAACACAACATGAGGCATCTGGGTGTCAAGCCTCATCAATGTGACACGTGTCCTATGAAatTTACCTGTAAAGACCATCTGAAACGTCATTACCGGATACACACAGGGGAAAAACCTTACAAATGTGATATGTGTGAAAGGGCATTTACACAGAGCAACGATCTCGTGAAACATCGACGTGTGCATCTAGGGGACGACCTTTATAAATGCTCACAATGCACGAAAAGCTTTCGACTAAAGACTGAGCTCCGGCAACATATTTCCGAACACTTCATCTCACAACAACTAGAAGCTTTGAATACTGAATACTGA
Protein Sequence: MNPEKINNFDYCCRTCLNASNHTYSIFSEIGHRLSVADVINKATTLDINKEDTLPKKICTKCFICIKTFHEFCEFANAVDVTLKQQIKCESNIYNNKLSIEMLKNNNKISSEMLENNKFSIEMFKSDKTTEHLENNPLNEIKLEHDTDDNDNHLSDLDIKVEVNPQNGHDPEPLNANNNIENIEVLIDSNEILTNKLKCELCNKKFRKLSNLNHHKKKHDAQIKSYTCDVCLKTYTDHDKFVRHLKTHQVHINGDKESIKKTHSIEHIEQKCQVCSLNFQSKNALSAHMRKHAKKGRVLSCSVCGKVFAKTSHLKRHELSHDVNHPYKCSLCPKTFAVENTWKEHVNKHNGIKPHPCPMCSKSFSHLTTLTTHIRIHIKEKPYLCPTCGKRFDSSTNLNQHMKRHQGLKLFACTLCPRKFVSKGELKSHNITHTGERSFACEQCGSTFTKRTSLAKHNMRHLGVKPHQCDTCPMKFTCKDHLKRHYRIHTGEKPYKCDMCERAFTQSNDLVKHRRVHLGDDLYKCSQCTKSFRLKTELRQHISEHFISQQLEALNTEY*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -