Basic Information

Insect: Cecropterus lyciades
Gene Symbol: -
Assembly: GCA_002930495.1
Location: MOOZ01001675.1:20032-22535[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0048 0.38 11.9 2.1 1 23 108 131 108 131 0.94

2 13 0.071 5.6 8.2 0.3 1 20 195 214 195 216 0.94

3 13 0.0016 0.13 13.4 3.4 3 23 244 265 243 265 0.95

4 13 0.0042 0.34 12.1 2.4 1 23 273 295 273 295 0.99

5 13 0.00091 0.073 14.2 1.8 1 23 303 326 303 326 0.94

6 13 0.00013 0.01 16.9 1.9 1 23 332 354 332 354 0.98

7 13 2.3e-05 0.0018 19.2 2.0 1 23 360 382 360 382 0.98

8 13 1.7e-06 0.00014 22.8 1.8 3 23 390 410 388 410 0.96

9 13 7.3e-07 5.8e-05 23.9 0.6 1 23 416 438 416 438 0.99

10 13 2.3e-08 1.9e-06 28.6 0.4 1 23 444 466 444 466 0.98

11 13 0.00055 0.044 14.9 0.9 3 23 474 494 472 494 0.98

12 13 0.00011 0.0091 17.0 3.4 1 21 500 520 500 522 0.96

13 13 5.7e-06 0.00046 21.1 0.1 1 23 528 550 528 550 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0048	0.38	11.9	2.1	1	23	108	131	108	131	0.94
2	13	0.071	5.6	8.2	0.3	1	20	195	214	195	216	0.94
3	13	0.0016	0.13	13.4	3.4	3	23	244	265	243	265	0.95
4	13	0.0042	0.34	12.1	2.4	1	23	273	295	273	295	0.99
5	13	0.00091	0.073	14.2	1.8	1	23	303	326	303	326	0.94
6	13	0.00013	0.01	16.9	1.9	1	23	332	354	332	354	0.98
7	13	2.3e-05	0.0018	19.2	2.0	1	23	360	382	360	382	0.98
8	13	1.7e-06	0.00014	22.8	1.8	3	23	390	410	388	410	0.96
9	13	7.3e-07	5.8e-05	23.9	0.6	1	23	416	438	416	438	0.99
10	13	2.3e-08	1.9e-06	28.6	0.4	1	23	444	466	444	466	0.98
11	13	0.00055	0.044	14.9	0.9	3	23	474	494	472	494	0.98
12	13	0.00011	0.0091	17.0	3.4	1	21	500	520	500	522	0.96
13	13	5.7e-06	0.00046	21.1	0.1	1	23	528	550	528	550	0.98

Sequence Information

Coding Sequence: ATGGAAGCGAGCGTTAATTCGCGAGTGGATAACATTTGCCGCGCGTGTCTATCCGAGGGCGTCAACATGAAGTCACTTTTAGACAAAATGGAGGGAGATTCACGAACACTTTACGAAGTGCTCTCTTTCGTTGCAAATATCAATGTATCCCCGAACAATAAATACCCACAGCAGGTTTGTACCAACTGCTACGATATTCTGTGCAAAACCGACGAGTTTAAGAAGCAATGTTTAAAATCGGACAACGTTTTAAAAGTTATGATTGATAAGGACTTAACTAATGGCGTTAAGGCCGAGGCTGCGGACAAACCAACCTTACCCTACCAATGTACTATTTGCTACGAGAAGTTCATGACTTGTACTTTACTAGAAACTCATGTAATGTTTGGTCACTACTGTGTAAAGGACTCAAGGAAGGAGTTTGACAATTACAATGTCCTGTCTGTAGAAATAGCTGAAACCACGTTAAAACCCTACGAAGTTAAGGAGGAGGCTGTAGAACTGGGAGCTGATTTCACTGACTACTTAGACGTTGACGGAAGTTATTCGGAACTAACGGAGTATAAGCAAGAGGATGATAAGTTTGAATGCAGCTCATGTGGCGACAGCTTCAACAACGATAAAGACTTCAAAATGCACATAGAAAACTGTAACAGCTGGAGCATATCCCGTATTCCGTTACCAAAGTTAAAGAAATCATTAAAACAGGACACAACGAAAAAGGAAGCATGTCCAAAATGTAACAAGCATTTCTCGACCGCAAAAGCTTTAAAATGCCACCAACGAGCTGTCCACAGGGAAGAGATTAACGAAACGTACCAATGCACAATCTGTATGCGAACATTCTTGCGGAAAAACTCATATATATCGCATATGAAGATGCACGAATCGAAGGACAACTTGAAATACATCTGTAACACTTGCAAACGAGAGTTCCAGCACCAAGCGCATTTAGATAACCACATCCTAGCTGTACACACTCGTGACAAGGGATACAGATGTGAGATTTGCAACGTAAACTTTACGACACAAGAATGTCTGAACATCCACAAAGTCACGCATCAAGTTGAGAAGAAACATCAATGCGAGCTTTGCAGTAAAGCGTTCCAAATGCTGTCAACGTTGAACGAGCATATGCGAACGCATACGGGAGAGAGACCTCATCTATGCTCGATATGCGGGCGCGGTTTCACCCAAAAGAATAACTTGGAGCAACATGTCAGGCGACATAAAGGCTTGAAGCCCTTCAAATGTGACACTTGTGATAGAAGTTTCGTTTCAAAGGGAGAGTTAGTAGCGCATACACGTAAACACAGCGGCGCCCATCCCTTCGTTTGCGATGACTGCGGTAAGGGCTTCACCACGTCGAGTTCTCTTGTTAAACACAGACGCATTCACACAGGCGAACGGCCCTATGGATGTGACTTATGTACCATGAGGTTCTCTGCATCGGGTACCTTGAAGAATCACAGACGGACCCATACAGGAGAGAAACCCTACCAATGCTCCCACTGTGAAAAGGCCTTCGTCCAACGCCAAGACCTAGTCTCCCATATACGTTGCCATACAGGAGAGAGGCCTTACGTCTGTGCTAACTGTGGCCAGGCCTTCAGAAAAGCGTCGGCGCTGAAGACTCACGTGAAGATTCACGTTAAGGACTCTGGTTTAACGCTGTCGACGCTGCAAGATGTTAGTGCGTTGTTGACTGTGCATCACGTGGCTAGCTAA
Protein Sequence: MEASVNSRVDNICRACLSEGVNMKSLLDKMEGDSRTLYEVLSFVANINVSPNNKYPQQVCTNCYDILCKTDEFKKQCLKSDNVLKVMIDKDLTNGVKAEAADKPTLPYQCTICYEKFMTCTLLETHVMFGHYCVKDSRKEFDNYNVLSVEIAETTLKPYEVKEEAVELGADFTDYLDVDGSYSELTEYKQEDDKFECSSCGDSFNNDKDFKMHIENCNSWSISRIPLPKLKKSLKQDTTKKEACPKCNKHFSTAKALKCHQRAVHREEINETYQCTICMRTFLRKNSYISHMKMHESKDNLKYICNTCKREFQHQAHLDNHILAVHTRDKGYRCEICNVNFTTQECLNIHKVTHQVEKKHQCELCSKAFQMLSTLNEHMRTHTGERPHLCSICGRGFTQKNNLEQHVRRHKGLKPFKCDTCDRSFVSKGELVAHTRKHSGAHPFVCDDCGKGFTTSSSLVKHRRIHTGERPYGCDLCTMRFSASGTLKNHRRTHTGEKPYQCSHCEKAFVQRQDLVSHIRCHTGERPYVCANCGQAFRKASALKTHVKIHVKDSGLTLSTLQDVSALLTVHHVAS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01359960;
90% Identity: iTF_01359960;
80% Identity: -