Basic Information

Insect: Cecropterus lyciades
Gene Symbol: -
Assembly: GCA_002930495.1
Location: MOOZ01001231.1:97079-103189[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 4e-05 0.0032 18.5 0.6 1 23 174 196 174 196 0.98

2 12 0.0002 0.016 16.2 2.9 1 23 202 225 202 225 0.97

3 12 2.4e-05 0.0019 19.2 0.3 1 23 231 253 231 253 0.98

4 12 2.2e-06 0.00017 22.4 2.4 1 23 259 281 259 281 0.99

5 12 4.2e-06 0.00033 21.6 3.8 1 23 287 309 287 309 0.99

6 12 5.5e-07 4.4e-05 24.3 1.0 1 23 315 338 315 338 0.96

7 12 6.8e-05 0.0055 17.7 3.9 1 23 344 366 344 366 0.97

8 12 1.5e-05 0.0012 19.8 0.8 1 23 372 394 372 394 0.98

9 12 0.00028 0.022 15.8 2.3 1 23 400 422 400 422 0.99

10 12 1.1e-06 8.9e-05 23.4 1.7 1 23 428 450 428 450 0.98

11 12 5.3e-07 4.2e-05 24.4 1.3 1 23 456 478 456 478 0.98

12 12 0.18 15 6.9 2.6 2 23 484 502 483 502 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	4e-05	0.0032	18.5	0.6	1	23	174	196	174	196	0.98
2	12	0.0002	0.016	16.2	2.9	1	23	202	225	202	225	0.97
3	12	2.4e-05	0.0019	19.2	0.3	1	23	231	253	231	253	0.98
4	12	2.2e-06	0.00017	22.4	2.4	1	23	259	281	259	281	0.99
5	12	4.2e-06	0.00033	21.6	3.8	1	23	287	309	287	309	0.99
6	12	5.5e-07	4.4e-05	24.3	1.0	1	23	315	338	315	338	0.96
7	12	6.8e-05	0.0055	17.7	3.9	1	23	344	366	344	366	0.97
8	12	1.5e-05	0.0012	19.8	0.8	1	23	372	394	372	394	0.98
9	12	0.00028	0.022	15.8	2.3	1	23	400	422	400	422	0.99
10	12	1.1e-06	8.9e-05	23.4	1.7	1	23	428	450	428	450	0.98
11	12	5.3e-07	4.2e-05	24.4	1.3	1	23	456	478	456	478	0.98
12	12	0.18	15	6.9	2.6	2	23	484	502	483	502	0.86

Sequence Information

Coding Sequence: ATGTCTGAAAACTTCAGTACAAATGAGATATGTCGTTGCTGCCATACACAGGGCGTGTTTAAGAGCCTTACTGCGTCACATACTCACGAGGGAAAGGAagaaatatattctaaaatgCTTAAAGACACATTTGACATAGTTctCACAACCATAGTACAAGAAAACAATGAATCCACAATCTGTGATAACTGTATCATCAGACTCCGTGATGCTGATCTGTTTAAAGAACAAGTATTGTTCTGTGAACAGAAATTGGggaagttttataataaacacaaaGTTAAAGGGCTGAAAGAAGAAGAAATCAGTCTTACCGGTATTGGAGAACGAGAGGACACTGAACAAAAGTACAGTgatgaagATAAGACGCCGTTAGGCATATTCACGGAGGCAGTAGATATAGATGACCAGCCTCTCTCTGTTTTGAGGAGTCAGGAGCCTGTAGAAGACTGGGCTATTCCACCAGACCATAGCGAAGATGAAGACACAAAACCCGTGAGAAAAATCAAAGCAAAGAAGTTTTCATGTACAATATGTTTGAAACAATTCACTTACAACGGTTCCTTAGACGTTCATATGAAAATCCACTCCGGTACCAACCCATACCCATGTCACATCTGCAAAGACACGTTTGCACACAACAAGGAACTCATAAAACACATCACAACCACCCATTCTGATAATGGGAGGTATCCTTGTAAAGTATGTTCGAAGATTTTCGAAAAAGCGAGACAGTTGAAAAATCACTTGATAATTCACTATGACAGTGATCAGTATAAATGTGTTCAATGTAATAAAGTTTTTCAGAGGCGTAAAGGTTTGAAGGAACACATGAAAACACACTCCGGGGAACGAAACTTCAAATGTAGTGTATGTAACAAGTCCTTCGgtcacaaacaaacattaaaatctcATATATTAACACATACAGGTGAAAAACCGTACGTATGTGATGTATGTGGGAGACGATTCCCACAACGCACTCATTTGAAAcgacatatttacataatacatacaggTGTTAAACCCCATTCATGTAAAGTGTGCCAGAAACAGTTTTCCAGCAAAAGTTACTTATCAATACATGAGAGACAACACACAGGGGTAAAACCCTACTCATGTGATGTTTGTAAGAAGGATTTCACGGCATATACAACCTTAAAAGTTCATATGAGAGTCCATACGGGCCAGAAACCGTATACATGCAGTTTCTGTGAGAGGCAATTTGCTCAAATGTCCAGTTTCAAGCTACATGAGAGAACTCATACAGGAGAAAGGCCGTTCTGTTGCAAAGTTTGTAAAAAACCCTTCGCAGATAATGGCTATTTGAAAATCCATATGCGAGTTCACACTGGAGAAAAGCCCTATAACTGTGATGTTTGTGATAAGTCCTTCAGGGAGACAGGGCAGCTGAAACGACATCTGAAAACACATAATGCGATCAAATTAACCTGTAATATATGCAATAAGCAGATTGGGAACTTATCTAGGCATATGAGAATACATTCAGTTGAAAGACATAAGTGTGCAGTTcgtgtaaaaaagaaacaatatcaaGATTAA
Protein Sequence: MSENFSTNEICRCCHTQGVFKSLTASHTHEGKEEIYSKMLKDTFDIVLTTIVQENNESTICDNCIIRLRDADLFKEQVLFCEQKLGKFYNKHKVKGLKEEEISLTGIGEREDTEQKYSDEDKTPLGIFTEAVDIDDQPLSVLRSQEPVEDWAIPPDHSEDEDTKPVRKIKAKKFSCTICLKQFTYNGSLDVHMKIHSGTNPYPCHICKDTFAHNKELIKHITTTHSDNGRYPCKVCSKIFEKARQLKNHLIIHYDSDQYKCVQCNKVFQRRKGLKEHMKTHSGERNFKCSVCNKSFGHKQTLKSHILTHTGEKPYVCDVCGRRFPQRTHLKRHIYIIHTGVKPHSCKVCQKQFSSKSYLSIHERQHTGVKPYSCDVCKKDFTAYTTLKVHMRVHTGQKPYTCSFCERQFAQMSSFKLHERTHTGERPFCCKVCKKPFADNGYLKIHMRVHTGEKPYNCDVCDKSFRETGQLKRHLKTHNAIKLTCNICNKQIGNLSRHMRIHSVERHKCAVRVKKKQYQD*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00795881;
90% Identity: -
80% Identity: -