Clyc015413.1
Basic Information
- Insect
- Cecropterus lyciades
- Gene Symbol
- -
- Assembly
- GCA_002930495.1
- Location
- MOOZ01001440.1:71286-80815[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 34 0.056 4.5 8.5 0.7 1 21 77 97 77 98 0.96 2 34 5.5 4.4e+02 2.3 0.0 3 23 127 147 125 147 0.92 3 34 0.067 5.3 8.3 0.9 2 23 170 191 169 191 0.96 4 34 0.027 2.1 9.6 0.1 1 23 195 217 195 217 0.95 5 34 0.11 8.9 7.6 0.8 1 15 222 236 222 245 0.78 6 34 0.0098 0.78 10.9 0.4 1 23 251 274 251 274 0.95 7 34 0.0058 0.46 11.7 4.0 1 23 281 304 281 304 0.98 8 34 5.9e-05 0.0048 17.9 2.6 1 23 311 333 311 333 0.97 9 34 0.00031 0.025 15.7 1.1 1 23 411 433 411 433 0.96 10 34 0.27 22 6.4 0.9 2 23 460 482 459 482 0.95 11 34 0.002 0.16 13.1 0.1 1 23 530 552 530 552 0.97 12 34 0.025 2 9.6 0.5 1 23 585 608 585 608 0.91 13 34 1.1 91 4.4 0.1 1 23 673 695 673 695 0.95 14 34 0.036 2.8 9.2 0.3 3 23 721 742 719 742 0.94 15 34 0.009 0.72 11.1 2.6 1 23 764 786 764 786 0.98 16 34 0.013 1.1 10.5 7.8 1 21 790 810 790 812 0.94 17 34 0.0028 0.23 12.6 0.2 1 23 817 840 817 840 0.93 18 34 0.0024 0.19 12.9 1.7 1 23 846 869 846 869 0.95 19 34 0.22 18 6.7 0.3 1 23 875 898 875 898 0.97 20 34 2 1.6e+02 3.7 0.4 1 23 941 963 941 963 0.87 21 34 0.038 3.1 9.1 0.1 2 23 987 1009 986 1009 0.95 22 34 0.0047 0.38 11.9 3.4 2 23 1032 1053 1031 1053 0.97 23 34 0.018 1.5 10.1 2.6 3 23 1059 1079 1058 1079 0.96 24 34 0.017 1.3 10.2 1.2 1 23 1085 1108 1085 1108 0.89 25 34 0.017 1.3 10.2 0.8 1 14 1114 1127 1114 1130 0.92 26 34 0.26 21 6.5 0.6 3 23 1242 1262 1240 1262 0.95 27 34 0.27 22 6.4 6.7 1 23 1284 1306 1284 1306 0.95 28 34 0.00013 0.01 16.8 0.7 1 23 1310 1332 1310 1332 0.98 29 34 0.00062 0.05 14.7 0.1 1 23 1337 1360 1337 1360 0.96 30 34 0.0004 0.032 15.3 1.3 1 23 1366 1389 1366 1389 0.98 31 34 0.014 1.1 10.4 1.1 1 23 1396 1419 1396 1419 0.97 32 34 0.0004 0.032 15.3 1.7 1 23 1425 1447 1425 1447 0.96 33 34 4.6e-06 0.00037 21.4 1.1 1 23 1453 1475 1453 1475 0.99 34 34 4.7e-06 0.00038 21.4 2.7 1 23 1481 1503 1481 1504 0.96
Sequence Information
- Coding Sequence
- ATGCATAAAATCTCACTCGAGTTGCACTCGAgaGCCCGCAAGCAAAACGAGCCAGAAACTGTGATAAAAACTGATATTGAAGATATTGTTTTCGGAGAGTCTCATAAAACAGAGAAGCGGCCGTATCAGAGAAGCGCGAGGGCTGAAGCTAGATTCATCACAAAGAAAAATGCTAGTGCCATCTTAGAGTGTTGGTCCCTCTGTCCTTTCAGATGGAAAAGAAACAGATTCAAATGTGCCTACTGCGAGGATAACTTTACAGAGTGTTCGGACTTGAGAGACCACGTCAGAATCTGCTCCACGCAACACAGCGTCAAAGACATCTACAGCAAGTTCAAAGAAATGACGCTCATCAATGTTGATACCACCGAAACCATTTGCAGACTTTGCGCTTTGCCTTTTTCCACTGTCAGCCAAATGGGTCAGCATGTGATCGAACACGGCTACGACTTTGACACGTCGCATCCAGACGGTGTCTTGCCGTTCGCGTTGGATAAGGAAATGTGGCGCTGCGTGATCTGTCAAGAAAAGTTCAACAATTTCCTGAAGCTCTATGAGCATATGAACTTCCATTACCAACATTATATATGCGCAACGTGCGGAAAGGGGTATATGACTGCGCCGAGGTTGAGGAAGCATTCCGAAGTCCATATAACCGGGTCATTTCCATGTGATAAGTGTGGGAAGAACTTCACTATGCGCGCAGCAAGGGATTATCATAAAGCGCACGCACATGCGAAGGGACCTCGATACGAATGCCCGCAGTGTAACATGAGATTCACGGGATATTACGAGAGAATGAACCATCTCAACGAAGCTCACAGGGAGAAGGAGGTTTCTTATAGTTGCACGCACTGTGAACACACCTTCAAGACAAGTGGAAAACGCGCGATACATGTCCGTACAGTTCATTTTCCTCAGCAACGAAACTTCTCTTGTCATTACTGCAACTGGCAGTTCAAAGCAGCTTATGAGTTAAAGAGGCACATGGTCAAACATACGGgttCGACTAGTGCGAACGATACGGACGTTGTAACAAGAGTTTGTCCGGGTAGGAAGTTGAAGGAGATCGTAAGCGCACGTCAGATGCGACGGCGTAGACGAGCTAACAACGCCAACTGGAAACCAGAGGAGTCTGAGAAAAGAATTGAGAAAACAATGATGCGTAGAAACGCAATGACTATTCTGGAATGTTCCACCGCTTGGGCCTTCCGTTGGTACCGGAATTCCTTCTACTGCTCCTACTGTGACGCTAAGTTTGTCGAGCCGAGCCATTTGCGTGAGCACGTGTCGAATCATCTATCCGAGTCACCGACAAAACGTGTGTTCTCAAAGCTAAGGGAAAATAATATGGTAAAGATTGATGTGAGCGATTGGAATTGTAGGCTTTGTGGCTATAAGATCGACAACTTAGATTGTTTAAAGGATCATTTGACTACGGTCCATAATAAGATCTTCGAAGAAGATTACAGCGATGGCGTTCTTCCTTTCAAGTTAGAATTGAACGGGTATCACTGTCAGAAATGTATGATGTATTTCCTCAGCTTCGCGAATATTAATGCACACATGAATACTCATTATCAGAACTATATTTGCGACGCATGCGGGAAAGTATTCGTGTCTATATCTCGGTTTAGGATTCACGTGCAATCCCACGAAACCGGTCAATTCCCGTGTTCGTGCGGTGAAGTTTTCGATACTAGAGGTGCTCGAAATAGTCATAATGTGAGGGTGCACCGCAAAGGTGTTCGGTACGCGTGTCCACACTGTCCGGAACTGTTCACAACTTACTACGCAAGAATTAAGCATTTGGTTAACGAACATACGGCACTTAATGTGAGTCTTAATCATGATTTCGATGGAAAGTTCAAACgacGAGTGGCGCGCAAAacatcagaaaaaaatacagttcaaaTAAAATGGACTAAGAAACGGAAAGTGATGGGTGAGAAGGCGAATGCTGCCTTCATTCTGGAGCATTCTAATGCGGTGGCATTTAGATGGATGCGGGGGAAGTTTATGTGCGCGTACTGTCCACAAATATATCCGAATGTGAACGAGATCCGACTCCACTCGGCGACTCATAAAAAAATGGAGATTTTTGAAAATCCCGAAGTCCGTAACTCTTTTCCATTGAAAGTTGATATTACTGATCTGTTCTGCTCCATCTGCCAACAAACAGTGGAGAATTTGATAGAACTTAAGAAGCATTTGCAGGAGAAGCATTCGAAGAGCCCCGATCAGGAGTACAGTGATGGTATCGTCCCCTTTGTGCTGACCGGGAAGATATTTAGCTGCGTCCACTGTGGGACACATTTCGAAGGTTTCATGAGTTTATTCATACACATGAATGTGCATTATCAAAGTTTTATCTGCCATACATGCGGAAAGAGTTATTCCGGGAAACACAAGCTTAGGTCTCACCAGAAGTGCCATGAAATAGGTCAGTTTCCGTGTCCGAAATGCGAGATGGTTTTCAAGAATCGGGTGCTGAAGAACCGGCATCTAGCGCTAGTCCACGGTCCCAAGAAGAGGTATCGCTGTCCTATATGTGACACCACGTTTGATTCGTGCCACGCGAGGTTGAAGCATCTCGCTGTGGTTCACGGTCAGAAGTCGGAGTATCGTTGCAGCTTGTGCCCTTCCGTGTTTGGAAGCGGGACCTCCAGATACTCGCACATGAGGATAGTGCACAAGAAGCAAAGACGAGTTCAAAACCCTAAGTGGAAACGGAGACGCAAGTATAACGATCAGAGAGATAACGCGGCTGTTATATTAGAGTTTTCGAACGCTCTCCCCTTTAGGTGGAAACGGGGGACTTACACCTGCGCTTTCTGTTCTCAGTCCTTCGGAGACTTTGCCGGTGTTAAGGACCACTCGACTGAGCATCCGAACAAAATAGAAGCGATGAGACTAGCCAGGCCGTACGATAACATCAAAATTGAAATCTCTGACTTGCGATGTGAGATATGTCTTTTGTCCGTGAAAAGTTTAGATGATCTTAAAGACCATTTGATATCAGAACACGCTAAACCCATCATAAAGGATCAGGGTATTGGTGTAACTCCGTTTTATTTAAGCAATAAGGAGATGAAGTGCACGCATTGTGACGAAACGTTTGAACTATTCACGAAGTTGAACACACACATGAACCAGCACTATCCTAATAACATTTGCTGTCACTGTGGGAAAGCGTTTGTTGCTGCGCATAGACTCAAAGCTCACCAAGTCATTCACGAGTTGGTTGATCAGTACAAATGTACCAAATGTGATCAGGTTTTTCAAACTAGAGCTCTAAGGAACAACCATTTTATTCTTATGCACGGCCCTGAGTTTAGATATAGATGTCCATATTGCCAGGAGTCGTTTAAAAgaAGAAAAACCGCAGAAGTTGAAATAAAGAAGGTGGAAAGTGAGGATAATAAATTGTCAGCGCTGATAACTACAGCAGAGCTGGAATTGACTAAGAAAGAAGAGGTGAGGCATAGAACGAGCGAAGGAAATGACAGACGAGCCGCGTACAggaaaaacatcaaaataatcaTGAGTTCTTGCACCGCTTACCCCTTCAAGTACAGGAAAGGTGCATACTTATGCTTCTTTTGCAAGAACACTTTTCTGGAGCCGGACAAAATGAGGGAACACACACAACAGCATCACGCAGATGTGACTTTCAAACCTCGAAAATATGAGCCGTTGAAAATGGACTTCGCGATGACGATTTGTAAACTCTGCGGTTTTCGGATAGACAACTACAACACGCTTAAACTACATTTGAAGGATCACGGTAAATCTATAGACTTTTCGCACGGCGATAGCATCTTGCCTTACAAGCTGAGTCGAGATGAACATTGCTGTCAAATATGTGGAAAACGGTATGAAATGTTCCTGAGTCTCCACAAGCACATGAACGACCATTACGAGCATTTTATCTGCGAGATTTGTGGGAAACGCTTCGCGACGTTGCAGAGAATGCTGAACCACACGCGAACTCACGAACGTGGCGATTTTCCGTGCAAGCAGTGCGGCGAGACGCTACCGACGTATTCGTCGTTGTACGCCCACATCGCGAAAGTCCACCGGTCGAACAAACGCTACAAATGTCCTATTTGCGACGAGAAGTTTGTTACTTACAAATTCAGGATGAAACATCTGAATACGGTCCATGGGGAGAAAACCGCGACTTTTCCTTGCCCATCTTGTCCGAAAGTGTTCGATCTCTGCAGCCGTCGTACAGCGCATATACGCTCAAGACATTTGCAGGAAAGGAACCATGCTTGTACTGAGTGTGGTATGAAGTTCTTTACGAACTATGAACTACAAGAGCATACAATAAAGCATGTTGGCGCGAGGATTTACCAGTGCGACGTTTGCAAGAAATCCTACGCGAGGTTGAAGACTCTGAGGGAACACATGAagatacataataatgataGGAGATTTGTGTGTCCTGTCTGTGGACAGACGTTCATCCAAAAGTGTAGTCTCAAACAACATGTCAGGGTACATCATCCCATGCAAATGAAGACGGACATGTTCTAG
- Protein Sequence
- MHKISLELHSRARKQNEPETVIKTDIEDIVFGESHKTEKRPYQRSARAEARFITKKNASAILECWSLCPFRWKRNRFKCAYCEDNFTECSDLRDHVRICSTQHSVKDIYSKFKEMTLINVDTTETICRLCALPFSTVSQMGQHVIEHGYDFDTSHPDGVLPFALDKEMWRCVICQEKFNNFLKLYEHMNFHYQHYICATCGKGYMTAPRLRKHSEVHITGSFPCDKCGKNFTMRAARDYHKAHAHAKGPRYECPQCNMRFTGYYERMNHLNEAHREKEVSYSCTHCEHTFKTSGKRAIHVRTVHFPQQRNFSCHYCNWQFKAAYELKRHMVKHTGSTSANDTDVVTRVCPGRKLKEIVSARQMRRRRRANNANWKPEESEKRIEKTMMRRNAMTILECSTAWAFRWYRNSFYCSYCDAKFVEPSHLREHVSNHLSESPTKRVFSKLRENNMVKIDVSDWNCRLCGYKIDNLDCLKDHLTTVHNKIFEEDYSDGVLPFKLELNGYHCQKCMMYFLSFANINAHMNTHYQNYICDACGKVFVSISRFRIHVQSHETGQFPCSCGEVFDTRGARNSHNVRVHRKGVRYACPHCPELFTTYYARIKHLVNEHTALNVSLNHDFDGKFKRRVARKTSEKNTVQIKWTKKRKVMGEKANAAFILEHSNAVAFRWMRGKFMCAYCPQIYPNVNEIRLHSATHKKMEIFENPEVRNSFPLKVDITDLFCSICQQTVENLIELKKHLQEKHSKSPDQEYSDGIVPFVLTGKIFSCVHCGTHFEGFMSLFIHMNVHYQSFICHTCGKSYSGKHKLRSHQKCHEIGQFPCPKCEMVFKNRVLKNRHLALVHGPKKRYRCPICDTTFDSCHARLKHLAVVHGQKSEYRCSLCPSVFGSGTSRYSHMRIVHKKQRRVQNPKWKRRRKYNDQRDNAAVILEFSNALPFRWKRGTYTCAFCSQSFGDFAGVKDHSTEHPNKIEAMRLARPYDNIKIEISDLRCEICLLSVKSLDDLKDHLISEHAKPIIKDQGIGVTPFYLSNKEMKCTHCDETFELFTKLNTHMNQHYPNNICCHCGKAFVAAHRLKAHQVIHELVDQYKCTKCDQVFQTRALRNNHFILMHGPEFRYRCPYCQESFKRRKTAEVEIKKVESEDNKLSALITTAELELTKKEEVRHRTSEGNDRRAAYRKNIKIIMSSCTAYPFKYRKGAYLCFFCKNTFLEPDKMREHTQQHHADVTFKPRKYEPLKMDFAMTICKLCGFRIDNYNTLKLHLKDHGKSIDFSHGDSILPYKLSRDEHCCQICGKRYEMFLSLHKHMNDHYEHFICEICGKRFATLQRMLNHTRTHERGDFPCKQCGETLPTYSSLYAHIAKVHRSNKRYKCPICDEKFVTYKFRMKHLNTVHGEKTATFPCPSCPKVFDLCSRRTAHIRSRHLQERNHACTECGMKFFTNYELQEHTIKHVGARIYQCDVCKKSYARLKTLREHMKIHNNDRRFVCPVCGQTFIQKCSLKQHVRVHHPMQMKTDMF*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -