Clyc018847.1
Basic Information
- Insect
- Cecropterus lyciades
- Gene Symbol
- -
- Assembly
- GCA_002930495.1
- Location
- MOOZ01003161.1:7089-13762[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-08 4.5e-05 23.7 0.0 2 42 247 287 246 290 0.91 2 2 4.7e-09 5.5e-06 26.6 0.0 4 34 314 344 312 354 0.89
Sequence Information
- Coding Sequence
- ATGGCTTTAAACAAATACAACGATCATATTGAAGTTGATGATAAGCATAGTGATAATGAAGATTATTCCAATTCAGTTGATAGTGAAGATGATGATTACAGACCAGATATTGAAGATGTTTTGCAAGATGTACGGACTGAAAATGGCAAGAACTCCGCGGCGCTCATAAATATTTCCAGGTGTAAGTGTTGTTTAGAAAACGATAAGCTGAAGAGCATGTGGGAGGAGTACCACTGTGATGGCCACAAGGAAGTCTACGGGACCATGTTAGTCGAGTGCTTTGCTCTGTCATGGGTTAAACCAAAGGTTCCTCTAACGAGCTCGGATCGTATCTGCGAGTCTTGCATCGCGCGGCTGAAGGACGCCCTCAGCTTCAAGACCGAGATACTCGCGTCCGGACAGCTGTTGAATGAGGAAGCGGGCAGCGttgAATATGACAAATTAAAACAAGAGTGTGATGAAGTAGAGGAAATACAAACAGAGTATCTGAATTTAGAGTATCtggatgatgataatgatattgGTGATGATGAAAACCTGCTTGATGTTAACGATACACATAATACTGATGGTGATGATAAAGACGCCATTGAGGGCGAGGAAAGAATGAAGGATAATATTATAACAGTGAAACTGGAAAAGCTAACGGCATCAGACCAACCAACACAAGAAGATACTAAACCAGATAATTCTCCAAGAAGAAAACGAACAATACCAAAGAAGTACAAGCAGTATACAGCAGAAGATTTGCAGAAAGCTGTCGACGCGGTGTTCAATAGGCATATGTCTCAAAACTGTGCTGCAAAGAGATTCAAAGTGCCTATACGAGTATTGGCGAGTGCTGTGAAAAATCACGTTCCAATCAAGAAAGAGGTAGCAGAGAAGaatccgaaacgcaagaccgtATCAAAAAAGAAGAAACAGCTCTATCCGGAACAGAACCTGTCGAAAGCTGTCGACGACGTGTGGAACAAACGGCTCACACAGACACAGGCGTCGAAATACTATAAAGTGCCAAGGTCGACTATATTCGGGATGCTTATAAAAAAATACGGTAGATCAACAAAACCGGAGCCGGGCGAAGAACATCACCCGGTGAAGAAGAAACCCGTCGAAGGGACGCTGGAAATGGCGAAGCACACGGCGAACATCATCGCGATCATGGAGAACTCGAACGCTACTCCGATCCGCTGCCGCGGGGACGGTGGCTACTCATGCTGCTTCTGCGACCAGCAATTCCCGAAACCTGAGGACCTGAAGGCCCACACGCTGGACCATGATATGAAGACGAAGCGGACCTTCACGAAGGGCAAGCGACCCTCGTCGTACTTCGTGAAGCTGGATATTACGGACCTGAAGTGTACTATCTGTAAGGCCAGCCTAAGTAGCTTGGAGAGCCTGCTGGTCCACCTCGCTGACCATCGCCTGACCATCTACACGGACATCAAGAACCACATCCTACCCTTCAGCTTCGATAGCGACGAGCTTCGTTGTACCATATGCGGAAACATCTTCAACAACTTCAAGGTTTTGCAAACCCATCTGAATGTTCACTACCCGAATTATGTGTGTACGATCTGCAACGCAGGTTTCGTGTCCAGTATGATCCTCCACAGTCACACCCGGGGACATTTGACAGGTGTGTTCAAGTGTGATCAGTGTTCGAAGGTGTACACGACACAGCGACAACTCCGTTGCCATCAGAACTTGGTTCACAAACAGGCACACATGGCTAGCAAGTGTGGTTATTGCTTCGAGAGATTCAGATCGTACCACAAGAAGATGGAACATCTAATCAAAGTGCATAACGTGAAACCCATGACGTTTCCATGCAATGCATGCGAGAAGATCTTCAAAAGTCAGTCATCGTTGAGAATTCACAGAAAACGAGACCATTTAATGGAAAGGAAGTACTCATGCACGGAATGCGATATGAAATTCTTTGCTAGAGTCATGCTAGACGCGCATATGCTGAAACACACTGGTATTAGGAATTTTCAATGCGATGTGTGCAATAAATCGTATAAACGAAGGCATACGTTACGGGAGCATATGCGGATACATGCGAACGACAGACGATTCAAATGTGTGCAATGTGGAGCCGCTTTCGTGCAGAAGTGTAGCTGGCGGGCGCATATGCGAACCAAGCATGGCGTTATCAGCTGA
- Protein Sequence
- MALNKYNDHIEVDDKHSDNEDYSNSVDSEDDDYRPDIEDVLQDVRTENGKNSAALINISRCKCCLENDKLKSMWEEYHCDGHKEVYGTMLVECFALSWVKPKVPLTSSDRICESCIARLKDALSFKTEILASGQLLNEEAGSVEYDKLKQECDEVEEIQTEYLNLEYLDDDNDIGDDENLLDVNDTHNTDGDDKDAIEGEERMKDNIITVKLEKLTASDQPTQEDTKPDNSPRRKRTIPKKYKQYTAEDLQKAVDAVFNRHMSQNCAAKRFKVPIRVLASAVKNHVPIKKEVAEKNPKRKTVSKKKKQLYPEQNLSKAVDDVWNKRLTQTQASKYYKVPRSTIFGMLIKKYGRSTKPEPGEEHHPVKKKPVEGTLEMAKHTANIIAIMENSNATPIRCRGDGGYSCCFCDQQFPKPEDLKAHTLDHDMKTKRTFTKGKRPSSYFVKLDITDLKCTICKASLSSLESLLVHLADHRLTIYTDIKNHILPFSFDSDELRCTICGNIFNNFKVLQTHLNVHYPNYVCTICNAGFVSSMILHSHTRGHLTGVFKCDQCSKVYTTQRQLRCHQNLVHKQAHMASKCGYCFERFRSYHKKMEHLIKVHNVKPMTFPCNACEKIFKSQSSLRIHRKRDHLMERKYSCTECDMKFFARVMLDAHMLKHTGIRNFQCDVCNKSYKRRHTLREHMRIHANDRRFKCVQCGAAFVQKCSWRAHMRTKHGVIS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00288291;
- 90% Identity
- iTF_00288291;
- 80% Identity
- iTF_00288291;