Clyc025479.1
Basic Information
- Insect
- Cecropterus lyciades
- Gene Symbol
- retn
- Assembly
- GCA_002930495.1
- Location
- MOOZ01045188.1:1017971-1028138[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-20 8.4e-17 62.0 0.0 16 89 70 141 62 141 0.95 2 2 1.9 5.4e+03 -1.5 0.0 10 38 241 279 231 282 0.52
Sequence Information
- Coding Sequence
- ATGAATAAGCATCCTGTGGGCCACACGGGCCGCGCTAAATTCGGTCGGCTGGTAGCGACGCACGTCGTAAACGCGCGATCTGACGCGCTCGCTCTCGTAAATCAGCGATTGCGATGCGATGCGATTCACCACGCGCTTTACGACCCTTACCAAGTGCGCTGTAAAGAGTTACAGCCGCAAATAGACAGCGAACGTTACGGCGTGTTCCGTGGCACACCGATAAACCGGCTGCCGATAATGGCCAAGTCAGTGCTGGACCTGTACGAACTGTACAATTTGGTGATCGCTCGCGGCGGCCTCGTCGAGGTGATCAACAAGAAACTGTGGCAGGAGATCATCAAGGGTCTCCGTCTGCCTTCTTCCATCACATCCGCCGCCTTCACTCTGCGTACACAATACATGAAGTACTTGTATGACTACGAGTGCGAGAAGAAGAACTTGTCAACCCGGAGCGAGTTGGACGCGGCCATAGAGGGCAACAAGCGCGAGGGGCGACGCGCGTCCGGGCAATACGACGCGCAAGCCGCCTTGGCTATGCCACCACTGAATCGCGGCGTGCCAGCCTCCCTGGCGCAGCTGTCGCAGCACATGCAGCCGCTGTCGCTGTCACTGGGCGGCGTGGGCGTCCCCCGCTTACCCCCGCTGCCGCCCCACGCGCCCCACGTCACCCACGACATCGAGTACCGCGTGCGGGAGTACATGAAGATGATACAGCAACAACGCGAGCTTATGAGGAATGGGTCAGAATCTCCACCGAGCGCCCCGATGGTGTCGCCCCGCGACGCGGCGCTCTCCGCCATCGACGTGTCCCGCCTGACGCTCTGGTCGCtgtacaacaacaacaacaacaacagccCGCAACCGGACCTCGAGCCGCAACGGCGATTGAATGACTTTGAATCATGTGATGCAAGCACAGGCGACCAGCAACTCGTGGTATCCATTGAACTGAACGGCGTGACGTATGAAGGCGTGTTGTTTCCTTCACAAAACGGAAACGGTCAAAACGGACACCGGCAAATGGTTTCTTAA
- Protein Sequence
- MNKHPVGHTGRAKFGRLVATHVVNARSDALALVNQRLRCDAIHHALYDPYQVRCKELQPQIDSERYGVFRGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLSQHMQPLSLSLGGVGVPRLPPLPPHAPHVTHDIEYRVREYMKMIQQQRELMRNGSESPPSAPMVSPRDAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQRRLNDFESCDASTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -