Csem023396.1
Basic Information
- Insect
- Cecidostiba semifascia
- Gene Symbol
- Zmiz1
- Assembly
- GCA_900474235.1
- Location
- UCQR01093361.1:68464-71015[-]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.021 2.7e+02 2.0 0.7 5 24 114 133 110 139 0.90 2 2 6.3e-26 8.3e-22 77.2 4.2 1 50 194 243 194 243 0.97
Sequence Information
- Coding Sequence
- atgtatttgtttgaaaaatttattaaccgACTGCAATTTCCAGAAGAGGAAGAACTGCGACTAACATTCCCGGTGAGGGACGGCATAATCCTGCCGCCGTTCCGGCTCGAGCATAACCTGGCGGTGAGCAACCACGTGTTCCAGCTGAAGCCGACGGTTCACCAGACGCTAATGCTACGGCCGGACCTCGAGCTGCAGCTGAAATGCTTCCACCACGAGGACAGACAAATGAACACGAACTGGCCTCAGAGCGTCCAAATATCGGTTAACGCGCTACCGCTTCAGATTGACAGAGGGGAAAACAAGTCGTCTCACAAGCCCCTATACCTCAAGGACATCTGCCAAGCTGGCCGCAACACTATCCAGATCACCGTGTCCGCCTGCTGCTGTTCGCATCTATTCGTACTACAACTGGTCCATCGGCCGAGTGTGCAGAGTGTACTGCAGGGGCTGCTGCGCAAGCGACTTCTCACCGCGGAGCACGGCGTGACGAAGATCAAGAGAAATTTCAACAATACGCATCCCGGCAACGGAATTCCACCAACGGAAAAGGATGCCGTCGAGCAAACATCGATAAAAGTGACGCTCAAGTGTCCTATAACGTTCAAGCGAATCACGCTACCGGCGCGAGGCCAAGATTGCAAGCACATACAGTGCTTCGATCTCGAGTCGTACTTGCAGCTCAAttgcgagagaggaaattGGAGGTGTCCGGTTTGCACTAAACCAGCCCAACTGGAGGGTCTCGAGGTGGACCAGTACATGTGGGGCATCTTGAACAACACAAACTCGCCGGACGTGGACGAGGTGACGATAGACTCGTCGGCCAACTGGAAGCCGAAAAAGTCCGAGCAGGACGAGCAGGAATGCAATAAGCGCATCAACACCAAGGCCATGTCGCCGGGCAGCATGAACATGCCGACGATGAACAGCTGGATGGACGCGAACCAGGCGATGAGCCCGTACATGCCGCCTGACATGAACAGCATCGTCAGCGGCTCGATGATGGGAGGCTCGCCGTCCTCGCAACAGGCATACGTCAGTCGAAATCCCGGAACGCCATCATCGACATCCGTCTCGCAGGCCAACAATCCAGCGAGTATGGCTGGCGGACTGGGAGGCGACATGTCCATGGGCGGAAATCCTGGACAGAACGATTTCACGGGAACGAATCCGCTCTCGCATCTCAACGACCACACCAACTCGCTCGACCATCTAAATGCCATCGATAAATCTCTGGGCGATCAGATGCCCCACACACCGCACACTCCACACACTCctggtggcggtggcggcggaaATAGCGGCCCCCCGAGCGTCGCGCCCTCCGTATCGCAAGACACAAGCGGCAACAATCTCAACACCTCGACGGGCAGCGGTGTGCCCGGCGTCACCGACACCTCCGACATCATCGGATCAGACCTGAACTTTGACCCCACGGCCGTCATCGACGGAGACGCTGGTCAGGAGGCACTCAACcTCTTGCCGGACAACGTAGTGGACCCAATGGAGCTGCTCTCGTATTTGGACCCACCGGATCTGAACACGCCGCCGAGCAGCGGCGCGAGCAGCGGAAATCCGCCGTCGAACGACGACATACTCGCCCTCTTCGAATAA
- Protein Sequence
- MYLFEKFINRLQFPEEEELRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKPTVHQTLMLRPDLELQLKCFHHEDRQMNTNWPQSVQISVNALPLQIDRGENKSSHKPLYLKDICQAGRNTIQITVSACCCSHLFVLQLVHRPSVQSVLQGLLRKRLLTAEHGVTKIKRNFNNTHPGNGIPPTEKDAVEQTSIKVTLKCPITFKRITLPARGQDCKHIQCFDLESYLQLNCERGNWRCPVCTKPAQLEGLEVDQYMWGILNNTNSPDVDEVTIDSSANWKPKKSEQDEQECNKRINTKAMSPGSMNMPTMNSWMDANQAMSPYMPPDMNSIVSGSMMGGSPSSQQAYVSRNPGTPSSTSVSQANNPASMAGGLGGDMSMGGNPGQNDFTGTNPLSHLNDHTNSLDHLNAIDKSLGDQMPHTPHTPHTPGGGGGGNSGPPSVAPSVSQDTSGNNLNTSTGSGVPGVTDTSDIIGSDLNFDPTAVIDGDAGQEALNLLPDNVVDPMELLSYLDPPDLNTPPSSGASSGNPPSNDDILALFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00692600;
- 90% Identity
- -
- 80% Identity
- -