Csem007791.1
Basic Information
- Insect
- Cecidostiba semifascia
- Gene Symbol
- pnr
- Assembly
- GCA_900474235.1
- Location
- UCQR01013854.1:31291-36187[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.9e-18 1.9e-14 53.5 2.6 1 34 71 103 71 105 0.96 2 2 4.9e-19 1.6e-15 56.9 6.2 1 35 130 163 130 164 0.98
Sequence Information
- Coding Sequence
- ATGGGTCCGCACACGGGTCACGCACACCCTCACGCGGCCCACCCCCACACGGCTCACCCTCACTCGAgtctcgctgctgcagcggccTCACCCTTCTACGCCCAGAACGTCGCGATGATGTCGTCCTGGAGAGCTTATGATAGTGCTGGATTTCAGCGGGCTTCGCCTTATGACACCGCCATGGACTTTCAGTTTAGCGAGGGTCGGGAGTGTGTGAATTGCGGAGCCATATCCACCCCGCTGTGGCGACGCGATGGCACCGGCCATTACCTCTGCAACGCCTGCGGCCTCTATCACAAAATCAACGGCATGAATCGTCCTCTTATTAAGCCTACGAAACGCCTGATCTCCGAATTCCAGACGGCGACGCGGCGATTGGGCTTGTGCTGCACGAACTGCGGCACGCGCACGACGACTCTCTGGAGGCGCAACAACGAAGGCGAGCCGGTCTGCAATGCCTGCGGTCTTTACTTCAAGCTTCACGGGGTCAACCGACCACTGGCCATGAGGAAGGACGGCATACAGACGCGCAAACGTAAACCCAAAAAGACGCCGGAACCCAATGCTAGGCAGAACCCCGGAGAACATGATAACAGCACGTCCACTACTTCGTCGCCTTCGAATGAACTAAAGAGCAGTCATCACCAGCAACACCATCAACAACCTCACCAACAGCCTCACCAGCAGCCACCTCAGCAGCATCAACTAGACAACAAATCCTCCTCGACGAATccatcgtcctcgtcgtcggaTCGTCCGGTCTACCTTGGCCACACGTCTCTCCTATCCTCTAGCGGTGGTAGCACCTCAGCGGCAGGTTCCAGCAGTTTGCCGACGGTGAAAACGGAGCCTCGTAGCTGCGACGCCGGTGTGATCGGTCAGCCTTACTCGGCTTACTATCAACATCCCCATCAATTGGCCGCCCCGACGAGCGAACACCAGCAGGCGAATTATTATGCTGCTGCGGCACAGGAAGCACCGTATCATCACCAGCACCACGTCACCGCAGCCGCTAAACTACTCGCGTCGTCCTAA
- Protein Sequence
- MGPHTGHAHPHAAHPHTAHPHSSLAAAAASPFYAQNVAMMSSWRAYDSAGFQRASPYDTAMDFQFSEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKINGMNRPLIKPTKRLISEFQTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTPEPNARQNPGEHDNSTSTTSSPSNELKSSHHQQHHQQPHQQPHQQPPQQHQLDNKSSSTNPSSSSSDRPVYLGHTSLLSSSGGSTSAAGSSSLPTVKTEPRSCDAGVIGQPYSAYYQHPHQLAAPTSEHQQANYYAAAAQEAPYHHQHHVTAAAKLLASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00714056;
- 90% Identity
- iTF_01487385;
- 80% Identity
- -