Basic Information

Insect: Cecidostiba semifascia
Gene Symbol: Mtf1
Assembly: GCA_900474235.1
Location: UCQR01026955.1:692-4336[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 1.1e-05 0.0011 19.8 0.8 1 23 126 150 126 150 0.98

2 6 0.00012 0.012 16.5 0.3 1 23 156 180 156 180 0.97

3 6 0.0002 0.021 15.8 1.8 1 23 186 210 186 210 0.97

4 6 5.1e-06 0.00051 20.9 1.0 1 23 215 239 215 239 0.96

5 6 4.3e-05 0.0043 18.0 5.1 1 23 245 269 245 269 0.98

6 6 5.2e-05 0.0053 17.7 6.3 1 23 275 299 275 299 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	1.1e-05	0.0011	19.8	0.8	1	23	126	150	126	150	0.98
2	6	0.00012	0.012	16.5	0.3	1	23	156	180	156	180	0.97
3	6	0.0002	0.021	15.8	1.8	1	23	186	210	186	210	0.97
4	6	5.1e-06	0.00051	20.9	1.0	1	23	215	239	215	239	0.96
5	6	4.3e-05	0.0043	18.0	5.1	1	23	245	269	245	269	0.98
6	6	5.2e-05	0.0053	17.7	6.3	1	23	275	299	275	299	0.97

Sequence Information

Coding Sequence: ATGGCGACGTGGGGTGCCGAGAAATACGAGGACCATGGTAATGCCGACGATATCGAGGATAGCTTCAACAGCATACTCGTCACGACCCACGATCTCCAGGACTGCCTCGACGACAGCCTCGACCTGCCCAGCTTCGTCAAGATTTACGGCCAGTCCGTCGACTTTGACTACGAGAAGTACTCGGACGATGATCCCCCCTACAATGAGAGTCTGCACGATGACAACACTGGGTATATTCACCACACCATCAGTTCggatgaaatatatatgagaATACATCCAGGCAACAATGATTCTATGCCCGATGATCCGTCACATGCCGTCATAACAATAGAAACTACAGATCCAGACACCAATCAAAAGCGTATCAGTAGATACACTTGTGAATACGACGGTTGCTCACGTACCTACAGTACTGTTGGAAATTTAAGAACTCATATGAAAACTCACAAAGGCGAATACCGGTTTAAATGCTCAGAACCAAGTTGTGGCAAAGCATTTTTAACTTCATACAGTCTAAAAATCCACATTAGAGTACACACGAAAGTTAAGCCATTTGAGTGCAATCACAATGGGTGTGAGAAGGCATTTAACACCCTATACAGACTAAGAGCTCATCAAAGACTTCACAGTGGCAATACATTTAACTGTGAAGAGACGGGATGCGTAAAGTTCTTTACTACACTTAGTGATCTCAAGAAACATATCCGTACTCATACTCAAGAACGACCTTACAAGTGCCGAGAAAAAGGCTGTGGAAAAGCTTTTACAGCCTCCCATCACTTGAAAACACATAGACGTACACATACTGGTGAACGTCCTTATATTTGTACATACAATCATTGTAAAAGATCTTTCACTACACCGCATAGTCTAAAAAGTCATCTAAAAACTCATAAGAAAGTTTCACAGTCAGATGAACAGagcAATACTGAAGAAGCAGCAAATCTTATTGAGGATGTGAATAAGACAAGTATAGATATTACTTCTGAAATCAATAGAACAGATAATATTGAACaacctataaatgaagttccTGTCACAATTGTGCTTTATTCTTCTATGGAACCATACAAACAAACGCAAGAGGTTCAAACAACTGATAGTTTGATTTTAAATGGTAGCAATAACTcagcaataaatttattacaacatCAAGAGCCTAATAGTTCTGCTAATATATATGAGAACTTAagtaataatatagaaattaatGGGAATAATGATGGATCtatagttaataattttaataatgctgAGTATGATCAGTTAAAATTGTTTGATGCTATTCAAAGTACTGATATTAAAGCTAATGCAGTACATGAAAATAGCAACAATAACTCCATCTTGCAAGGGacaaatattgttttgaacaataatataagtacAGATTCTTTAGTACATAGTAATCTTACAGATAATTTAATAAGTCAGTCTATTCCAGCCACTGAAGTAGATAATTATTTAGATAAACCTATGATGGACTTAATGAATAGAACTTTAGACAATTGTGAGAGTAATactgttttatataatactttatcTAGTCAGTTGCCAAacgttttaaatatatcaaatgaTGATCATTTGATAACAAACGAAATCAATCAGTTATCTTTCGAAAATAGTACAGCCTTTGTAAATGAGGCACCAATTGAAGACATAACAAACGCAATAACAAACTCCATCAGCAACAACAATGAGTCACGTGCCCTTGAATTAGCGTTGGCTACGGAAGAAGAGAGACAATCACCATGGATTGATATAAATTCCTTAACAAGTGAACTTTCAGATAAAATAATGGCGTCTACCGCTGTGCCGACTGTAAGAACGGAATCTACATGGTCAGAATCAAATGCTCTTCCAACTGCTGTTCATTCTCTTGTTAATCTGCTTGGTCCCGAACCATATCCACTAGATCAACTACAAAAAACGCCCGTTCTAGAAACAGTAAATCTAATAGATACAGAAAACGGAACCAATGCGAATGCTGAAGTCGTCATGAATTATGCGGAATATCCAAATAAATGTTGTTCAAAGggtgatgaaaaaaaagcagaagcTTCTAGAAACATATTACAAGAAATCACAGCTGATGCTGGAATATGTAAGTGTTCTAGCTGCAAATGCGACAGTGAAGGAAATAATTGTCAAAATTGTTCTCATTCAGGACAAGAGAATCAAGAGAAAGAACAATCGAAAAGTCATGAAATaagacaaataaatatttcagatATAGTTTCAACATTGCAAAACAAATGTTGTTGCAATAATCAGAACAGCTGTGGGTCATGTTGTGttgttgtatgtataaaaacgtTGCAAGAACTCCAAGAAGTATTTAATACCTGTTGTAAAAGTACAAGCAGTGTAGGATGCTGCAAAAGTAATTCTATGAGTAATCAAGGTATATCGTTACCAATGGCTTCATTGAAAAGTCAATTAGCGGGGAACCaatga
Protein Sequence: MATWGAEKYEDHGNADDIEDSFNSILVTTHDLQDCLDDSLDLPSFVKIYGQSVDFDYEKYSDDDPPYNESLHDDNTGYIHHTISSDEIYMRIHPGNNDSMPDDPSHAVITIETTDPDTNQKRISRYTCEYDGCSRTYSTVGNLRTHMKTHKGEYRFKCSEPSCGKAFLTSYSLKIHIRVHTKVKPFECNHNGCEKAFNTLYRLRAHQRLHSGNTFNCEETGCVKFFTTLSDLKKHIRTHTQERPYKCREKGCGKAFTASHHLKTHRRTHTGERPYICTYNHCKRSFTTPHSLKSHLKTHKKVSQSDEQSNTEEAANLIEDVNKTSIDITSEINRTDNIEQPINEVPVTIVLYSSMEPYKQTQEVQTTDSLILNGSNNSAINLLQHQEPNSSANIYENLSNNIEINGNNDGSIVNNFNNAEYDQLKLFDAIQSTDIKANAVHENSNNNSILQGTNIVLNNNISTDSLVHSNLTDNLISQSIPATEVDNYLDKPMMDLMNRTLDNCESNTVLYNTLSSQLPNVLNISNDDHLITNEINQLSFENSTAFVNEAPIEDITNAITNSISNNNESRALELALATEEERQSPWIDINSLTSELSDKIMASTAVPTVRTESTWSESNALPTAVHSLVNLLGPEPYPLDQLQKTPVLETVNLIDTENGTNANAEVVMNYAEYPNKCCSKGDEKKAEASRNILQEITADAGICKCSSCKCDSEGNNCQNCSHSGQENQEKEQSKSHEIRQINISDIVSTLQNKCCCNNQNSCGSCCVVVCIKTLQELQEVFNTCCKSTSSVGCCKSNSMSNQGISLPMASLKSQLAGNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00286716;
90% Identity: iTF_01037320;
80% Identity: -