Basic Information

Insect: Cecidostiba semifascia
Gene Symbol: ZNF341
Assembly: GCA_900474235.1
Location: UCQR01019124.1:8049-11309[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.08 8.1 7.7 3.9 1 23 45 67 45 67 0.98

2 13 0.00058 0.059 14.4 6.0 1 23 224 246 224 246 0.99

3 13 2.8e-07 2.9e-05 24.8 0.4 1 23 252 274 252 274 0.98

4 13 0.014 1.4 10.1 1.3 1 23 299 322 299 322 0.96

5 13 0.038 3.8 8.7 0.2 1 23 328 352 328 352 0.98

6 13 0.00047 0.048 14.7 0.8 1 23 357 379 357 379 0.98

7 13 0.0033 0.34 12.0 3.9 1 23 391 415 391 415 0.91

8 13 0.00029 0.029 15.4 2.0 1 23 417 439 417 439 0.98

9 13 7.3e-06 0.00074 20.4 0.2 1 23 445 467 445 467 0.96

10 13 7.2e-05 0.0072 17.2 0.3 1 23 473 495 473 495 0.95

11 13 0.0018 0.18 12.9 1.2 2 23 502 528 501 528 0.89

12 13 0.13 13 7.0 9.0 1 23 557 580 557 580 0.95

13 13 0.0085 0.86 10.7 2.6 2 19 583 600 582 603 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.08	8.1	7.7	3.9	1	23	45	67	45	67	0.98
2	13	0.00058	0.059	14.4	6.0	1	23	224	246	224	246	0.99
3	13	2.8e-07	2.9e-05	24.8	0.4	1	23	252	274	252	274	0.98
4	13	0.014	1.4	10.1	1.3	1	23	299	322	299	322	0.96
5	13	0.038	3.8	8.7	0.2	1	23	328	352	328	352	0.98
6	13	0.00047	0.048	14.7	0.8	1	23	357	379	357	379	0.98
7	13	0.0033	0.34	12.0	3.9	1	23	391	415	391	415	0.91
8	13	0.00029	0.029	15.4	2.0	1	23	417	439	417	439	0.98
9	13	7.3e-06	0.00074	20.4	0.2	1	23	445	467	445	467	0.96
10	13	7.2e-05	0.0072	17.2	0.3	1	23	473	495	473	495	0.95
11	13	0.0018	0.18	12.9	1.2	2	23	502	528	501	528	0.89
12	13	0.13	13	7.0	9.0	1	23	557	580	557	580	0.95
13	13	0.0085	0.86	10.7	2.6	2	19	583	600	582	603	0.94

Sequence Information

Coding Sequence: ATGGCGCAGTCAATCTTTGATGCTCTGTCGGGTGTTTCTTTGGATGGCTCGACAGTTCAATCTCTATTGGAGTCTCAGACGCTAATCAGCGAAGTTGAGCAGTCAGCAATAGATCAGGATGAGGACGATATATTTCAGTGCGGCAAGTGCAAGAGTCAGTTCACGTCGTTGCACTTGTTTGTACTTCACAAGAGAGAGCATACCAAGGTACAGGAGCAAACTGTAGATTTAAGTCAATATTTGGTGAGCAACGATAGTCCTGTTGTTCAGACTGATGACAACTGCCAAGATGGTACGCAGTATAATCCTGAGGATGATTTCGATCAGACTCATCAACTTGGGGAACCAATTATTTTGGAGGAAAATGATATACTTTTTAGCATGGACCAGGAAGGTGCTAGCTACTTAACGTCCGACTCGAGCTTTAATGTACCCATAATTTTAAGTACTGATGGATTAGAGTCTTTTGCTAATTCGTCCATCACAGGAACTGATGATGATCCTTTGAATGAAGAAGTGAATGAGATACAAGCTTTAAGGAATGATATTCATCAAAGTCTAGAAGAGAGTAATTTGCATGATTCCATGAACCTTGATATTCCACAAGCTGAGAATCCTGTTGAGAGTTtagaacaagaaaataaatctgaccagatacaaaatttaaagTACAAGTGCAGCTACTGCCATAAGCAATTCGCCAAAAAGTTTTACTGGCAGCAACATGAGCGTTCTCACACAGGTGAAAAGCCATATCAATGCGTAGTCTGTGGTCGTCCATTTGCCCAAAAGTCCAATGTGAAGAAGCACATGTCATCGCACAAAGTCTGGCCTGGCACAGCAATACACTCGCTACCTCCAGAGGCACCTGCGGATGGCAGCATAGAACGTTCATACCACTGCCAGTTCTGCAAGGAGATATTTGATTCTTACAAGGCTCTTAAAGGCCACCTTATCGTCTCTCATCTAACACTCAAGGTTTACAAGTGTGTGCAGTACGGTTGTGGTTCGATGTTTGCTGAACTTGAGGACTTCTTGGAGCACACACGTAGCCACAAGCGCTCAGAATACCGCTGTCATGTTTGTGCTGAAGCTTTTAGTACACTTACGGATCTTGGGTTGCACCAATACACCCACTCCGTCCAGAAGCAGAAGACCACAGAGAAGTACTACTGTTGTTCAATCTGTAAGTCGTCGTTTTCGAATCTGGAAGCCCTGCAGCATCATACGGAGACGACGACCCACGATTATGCCTGCCCGCACTGCGGCAAGAGCTTCCTTATCGAGAGGTTCCTACGCAGACATTTGAAGACTCACGCCTCTTCGGCTCGTTTTGCTTGCGAGGACTGCGGAAAAGCTTTCAAGACCGAACAATATCTCGCCAATCATAAGCTCATACATAGCGAAGACACGCCCTTTCTTTGTCCAAACTGCCCAGCGCGCTTCAAACGCAAAGACCGCCTTGGCCGGCACATGCTCATACACGATCTCACAAAACGACTCAAATGTCCGTTCCGCGGCCACCTGGGCTGCATGCGCGAGTTCTCGCGACCAGATAAGCTCAAACGGCACCTCCTTACCCATACCGGACACGGTGCCAGTAGCGGAGCTGTTGGAGGTAACAACAATAACTCTACCAACGGGACAGTCAGTGGAAGCAGCAAGAGATTCAGCTGCATGCACTGTAACAGACATTTTCACAGAGCTCAGGCGCTTAAACATCACGAGCTCAGCAAACATGCACTCAAGTGCGATCTTTGTTCGCACgcatttaaaacaaaagatcAGCTGCTGACGCACAATTGCGAGCAAACGACTGAGTCGAAAAAGCACACGAGCTCGCAGCTGCCGAAGAAGGCCTCCGGGTCGTTTAAGCCACGAAGGCCGACCCCCAAGCGACAGGCTTCCTCCAaaactactactaccactactaaTAGTTTAAGTACTACTGATAAAGATAAGGATAAGTCAAAGGTTGATGAAATGCCGATAAAGCTTAGCAATCGAGAGGAAGagtttgaaatgaaaatagagTGCTTGGATCTGCATCTGGACGTGAGCAACGACAGTTCATTAACTCTAGATTCCTTAAAAGCGGATTAA
Protein Sequence: MAQSIFDALSGVSLDGSTVQSLLESQTLISEVEQSAIDQDEDDIFQCGKCKSQFTSLHLFVLHKREHTKVQEQTVDLSQYLVSNDSPVVQTDDNCQDGTQYNPEDDFDQTHQLGEPIILEENDILFSMDQEGASYLTSDSSFNVPIILSTDGLESFANSSITGTDDDPLNEEVNEIQALRNDIHQSLEESNLHDSMNLDIPQAENPVESLEQENKSDQIQNLKYKCSYCHKQFAKKFYWQQHERSHTGEKPYQCVVCGRPFAQKSNVKKHMSSHKVWPGTAIHSLPPEAPADGSIERSYHCQFCKEIFDSYKALKGHLIVSHLTLKVYKCVQYGCGSMFAELEDFLEHTRSHKRSEYRCHVCAEAFSTLTDLGLHQYTHSVQKQKTTEKYYCCSICKSSFSNLEALQHHTETTTHDYACPHCGKSFLIERFLRRHLKTHASSARFACEDCGKAFKTEQYLANHKLIHSEDTPFLCPNCPARFKRKDRLGRHMLIHDLTKRLKCPFRGHLGCMREFSRPDKLKRHLLTHTGHGASSGAVGGNNNNSTNGTVSGSSKRFSCMHCNRHFHRAQALKHHELSKHALKCDLCSHAFKTKDQLLTHNCEQTTESKKHTSSQLPKKASGSFKPRRPTPKRQASSKTTTTTTNSLSTTDKDKDKSKVDEMPIKLSNREEEFEMKIECLDLHLDVSNDSSLTLDSLKAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00691382;
90% Identity: iTF_01190680;
80% Identity: -