Basic Information

Insect: Cecidostiba semifascia
Gene Symbol: -
Assembly: GCA_900474235.1
Location: UCQR01019196.1:648-6609[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.001 0.1 13.6 0.8 1 23 83 105 83 105 0.98

2 28 3.1 3.2e+02 2.6 1.0 1 23 160 183 160 183 0.92

3 28 6.7 6.8e+02 1.6 3.2 2 16 227 241 226 246 0.89

4 28 9.5 9.6e+02 1.1 4.8 1 23 255 278 255 278 0.95

5 28 0.0095 0.96 10.6 1.9 1 23 290 312 290 312 0.99

6 28 0.0026 0.27 12.3 0.7 1 23 328 351 328 351 0.96

7 28 0.058 5.9 8.1 3.0 1 23 364 387 364 387 0.96

8 28 3.4e-05 0.0034 18.3 2.3 1 23 393 416 393 416 0.95

9 28 0.0014 0.14 13.2 0.7 3 23 423 444 421 444 0.93

10 28 0.0064 0.64 11.1 0.4 1 23 449 472 449 472 0.96

11 28 7.1e-08 7.1e-06 26.7 0.8 2 23 479 500 479 500 0.97

12 28 2e-06 0.00021 22.1 0.9 1 23 506 528 506 528 0.96

13 28 5.5e-07 5.6e-05 23.9 0.3 1 23 534 556 534 556 0.98

14 28 2.5 2.5e+02 3.0 0.6 1 23 671 694 671 694 0.91

15 28 0.71 72 4.7 0.3 1 23 757 780 757 780 0.88

16 28 0.75 76 4.6 1.0 2 23 845 867 845 867 0.95

17 28 4.6 4.7e+02 2.1 2.1 2 23 898 920 897 920 0.87

18 28 2 2e+02 3.3 5.6 1 23 1028 1051 1028 1051 0.94

19 28 0.41 42 5.4 1.6 1 23 1061 1084 1061 1084 0.96

20 28 5.9 5.9e+02 1.8 2.0 1 23 1098 1120 1098 1120 0.88

21 28 0.0037 0.37 11.9 1.5 1 23 1133 1156 1133 1156 0.98

22 28 0.014 1.4 10.0 1.6 1 23 1174 1197 1174 1197 0.96

23 28 7e-05 0.007 17.3 1.9 1 23 1203 1226 1203 1226 0.95

24 28 0.00077 0.077 14.0 1.2 3 23 1233 1254 1231 1254 0.93

25 28 0.0062 0.62 11.2 2.0 1 23 1259 1282 1259 1282 0.97

26 28 1.8e-06 0.00018 22.3 1.2 2 23 1289 1310 1288 1310 0.96

27 28 2.9e-06 0.00029 21.6 1.0 1 23 1316 1338 1316 1338 0.98

28 28 7.2e-05 0.0072 17.2 2.1 1 23 1344 1366 1344 1366 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.001	0.1	13.6	0.8	1	23	83	105	83	105	0.98
2	28	3.1	3.2e+02	2.6	1.0	1	23	160	183	160	183	0.92
3	28	6.7	6.8e+02	1.6	3.2	2	16	227	241	226	246	0.89
4	28	9.5	9.6e+02	1.1	4.8	1	23	255	278	255	278	0.95
5	28	0.0095	0.96	10.6	1.9	1	23	290	312	290	312	0.99
6	28	0.0026	0.27	12.3	0.7	1	23	328	351	328	351	0.96
7	28	0.058	5.9	8.1	3.0	1	23	364	387	364	387	0.96
8	28	3.4e-05	0.0034	18.3	2.3	1	23	393	416	393	416	0.95
9	28	0.0014	0.14	13.2	0.7	3	23	423	444	421	444	0.93
10	28	0.0064	0.64	11.1	0.4	1	23	449	472	449	472	0.96
11	28	7.1e-08	7.1e-06	26.7	0.8	2	23	479	500	479	500	0.97
12	28	2e-06	0.00021	22.1	0.9	1	23	506	528	506	528	0.96
13	28	5.5e-07	5.6e-05	23.9	0.3	1	23	534	556	534	556	0.98
14	28	2.5	2.5e+02	3.0	0.6	1	23	671	694	671	694	0.91
15	28	0.71	72	4.7	0.3	1	23	757	780	757	780	0.88
16	28	0.75	76	4.6	1.0	2	23	845	867	845	867	0.95
17	28	4.6	4.7e+02	2.1	2.1	2	23	898	920	897	920	0.87
18	28	2	2e+02	3.3	5.6	1	23	1028	1051	1028	1051	0.94
19	28	0.41	42	5.4	1.6	1	23	1061	1084	1061	1084	0.96
20	28	5.9	5.9e+02	1.8	2.0	1	23	1098	1120	1098	1120	0.88
21	28	0.0037	0.37	11.9	1.5	1	23	1133	1156	1133	1156	0.98
22	28	0.014	1.4	10.0	1.6	1	23	1174	1197	1174	1197	0.96
23	28	7e-05	0.007	17.3	1.9	1	23	1203	1226	1203	1226	0.95
24	28	0.00077	0.077	14.0	1.2	3	23	1233	1254	1231	1254	0.93
25	28	0.0062	0.62	11.2	2.0	1	23	1259	1282	1259	1282	0.97
26	28	1.8e-06	0.00018	22.3	1.2	2	23	1289	1310	1288	1310	0.96
27	28	2.9e-06	0.00029	21.6	1.0	1	23	1316	1338	1316	1338	0.98
28	28	7.2e-05	0.0072	17.2	2.1	1	23	1344	1366	1344	1366	0.97

Sequence Information

Coding Sequence: atgctaatcaaGTCTGACAGTGCAGAAGCAGAGAACGTCGTTGTCACCTCTCCGACCAGGAAGACGGTTTTCATCCGGAAGAACAGCGCCGAGACGAAGAGCAGTCCTGATCAGGAGTCCTCCATGACGCTTTACCAAGTGTCGATTGTCAACGGTAAAGCTTCGTACTCGTTGTTGCCCATCAAGAAGGTTGAGACCAAGAAAGCTTCGCCTAAAAAGAAGACCAATCGGCAAACTGACCAGAAATTTACCTGCGACGAGTGCGATTTGAAATTCACAACAGTGATCCGGCTCAAGGCGCACAAGTCGACTCATAAGCCGCTGAACAAGTTATCCAAGGCGTCGAGAATAAGGTGCCGCGAGGAAACGGTGGTGACACCTATGTCGCGCAGGAAACAGTATCTCAAGCCGTACAACGTAACTGAAGATGAGGAGATAGAACTAAAGTCAAAGCAAGCTGGTAAGAAGGATTTGACGTTCTTCTGTCCGTCTTGCGAGTTTAGCACCGACAATCGAAACATGATGTTTAACCACTTCTCTGTTATACACTGCATGAAGCCCTCGGACATCAATATCGAATCCGACGAGCAGCAAACTCACTGTGACGAGGCCCTCGTCGAAAGCATTGAGGATTTCGAAGAGGTTGTGAAGGAGGAGCACCCAGATCAGATCACCCTAAACTGCGCGCAGTGTGGCTTCACCTGCAGCAACCAGGACGATCTTGACTTTCACACGTGTGAGCCTTCGGAGGACTGCACCTCCTTTAGCTGCCACCTGTGCACCTACGAGTGCCTCACTCGTATGGGTCTGCAGAGCCATATCACCCGCAAGCACAGGCCGAAGCCCGAGAAGGGCGCCAGCAACGAATACGAGTGCGACGAGTGCGAGTTTCGCAGTGAGAACAAGACCTCGTTGTACTCGCACAAGCGTCGGCACCGCAGCGGAAAGCTCAACGTCAGTGTCAAGCGCAGCGAGaacaaatttttctgtaaCGAGTGCGACTTTGCCGCCAGGACCAAGAGCGCACTGTACATGCACATCCAGAGGAGGCACAAGCTTATTGAGTCGAAAACCGAAAGACCTGAGTTCTACAGCTGCGAGCACTGCGACTACACTAATAAGACCAAGTATGAGATGAAAGTACACGTGATCAGGAAGCACACGAACGAGTATCCACACGAGTGCAAAGACTGTGGCAAGAAGTACAAGATCAAGGGAGACCTAACCAACCACATCAGGTTCCAGCACAGAGAGCAGCCCATAATCTGCGATGTCTGTGGCAAGACCTGCGGCAACAGTAACTCGCTCTACGTGCATCAGAAGTTTGCCCACTACAAGGCCGAGTTTGAGTGTCCGATCTGCCACAGAAGGATGGTGAGTCAAGCGAACCTGGACGAGCACGTTCTTAAGCAGCACGAGCAGAGGGAAGACGCCGTGTGCGAGGAGTGTGGCAAGACCTTCACGAGGCAGAGTAGATTGAAAATCCACATGAGGATTCACACTGGTTTAAAACCTCACGCTTGCAAAGTCTGCGGTAAGGCTTTCAGCAGAAGAACCGCGTTGAGGCAACATCTGCTGATTCACACCGGACAGCGGCCCTACGTCTGCGATATTTGTGGCAAGACATTCACGCAGAAACCTGGACTGATCAGTCACAGAAAGAGCCATCCTGGGTCGCATCCACCCTTGCCCAGAGTTACCATCGACCACGTGCTTTCGGATTTGCTTACCGAAGGAGACGGAcccttttcttttattttcagaaaaaaacaGCTGCCGATCATCAGACCCATAAGTGGCAAGCGCCTGGTCTTCCAGAAGAAACTCGTCAAGCTCAGCAAGCCCTTGATGGGCAAACTCTTTTCCGTCGCTACTCCAATGGTCCAGGTGAAGATCGAGCCGGTCGAGGTGCCCAGCACCGGTGACTTCGAAGAGGTCACCATCGACGGCACCAGTTCCATTAGCAGTGTCACGCCGTTTACCCTGGAAAAGAAACACGACTTCGTGGTGTACATGTGCAAAAGCTGCAAGATATACTTCCCTATACGGCAAATGCTCGAGGATCACAATACCAAGATCCATGCGCCTCAGAAAAAGTCACCCGTTAAGGTGGTAAGAAGAGTGGTGAGTCAGTCCGAGAAAATTGCGAGTCCTCCAAAGAAAAGGCAAAAGTGCGTGCAGATATCAGTGTCAAAACCTGATAAATTTCCTGAGGAGGGAAAGGACAGAATCTACTTCTCCGGTTATTACAAAATCTCCACCGGCGATTACATTTGCAACAACTGTGGCTTCAGCTCGCGCATCCGCTCGACTGTCGCCTCGCATGCCGTGCGCAAGCACAACGCTCTCGGCTTTGAAAACGTCGAAAAATCCACGCCTCCTAGTGCTTCCATCGAAGAAGTCACAAAGTTCGAGCCAGTCGAAGAGGACGATGAGGGCAGCTGGCCGGTTGAAGTAGTCGAGGAGAtagaggaggaagagaagTACGAAGAGATGGACAAGACAGATCCTCTGGCTGAAAAACAGGGACGCTCTTGCCCGTACTGTCCGTTCGTCTCGAGCATTGGTTCGACCTACCACTCGCACATCAAGCGCAAGCATCGCGAGCAGTGGCTCAAGTCTGTCGCAAAGAGGGTCGCCGACCTCAAGACCACGCCATCGTCTGTGACTAACACCGCCATCAGCCAGCTCACCTGCTCGTCCTGTCCCTTCAAGAGCTTCAAGCGCTCGACGATGCGATCTCACGTCTTACGCAAGCATGAGAAAGACCCATCGAACGACGACCCTGAGTTCGCGGATATGCAGGCGCAAACCGAGGGCAAGAAAGTGCGCAAGTGTCCCTACTGTCCGTTCGAGTCCTGGATATACTCGACGATGAACTCGCACATTACGCGGACCCACGGCGACCAACCTCATCCGCTCAAGTCCAAGAATAAGCCGCGCTACAATATGCAGCTGTTCACCGGATACGCCTGCCACTACTGCTCCTTCGCCGGAGCCACGGTTATGAGCATCCGTTCGCACAGCGCGAGAGAACACACCGGCATGAAGCAACCGCTGCAGCAGGTGCCGGTGCAGGAATTCGACTGCGACCAGTGCGACTACAAGACCCAGAGTCGACGACACATGCAGCTGCATCTCAAGGACTGCCACACGATGCTGGCTAACACGGAGGGTATGTTCCAGTGTCACGCATGCTCGTACGAGACACAGTCGCGTATGGGTCTGCAGAGGCACGTGTCGATCAAGCACAGCGTGCTCGCCAGCATGAATATCGCGGATAGCGCGTACTTCAAGTGCGACCAGTGCAACTACAGGACACTCAACTCTAAGCTCATGGATTGGCACAAAAAGCAGCACAGCGAGGAGAACTTCGGCGAGAACGACGGCAACAGCTACGAGTGCAATGACTGCGACTTCTCCACGTGGACGAAGAACCAGCTGTACCAGCACATCAGAAGGAAGCACAAGGATGGTGAGACCAACGAGAAGGAGCCGGAACTCGAGCCCGAGCAGGTCTACGCCTGTGGCCAATGTGACTACGTATCTAAGAACAAGCACGCTATGAAGACCCACGTGCTTAGAAAACATACTGATGATTATCCGCACGAGTGTAATATTTGCGAAAAGAAGTACAAGGTCAAGGCTGACCTCACCAACCACATCAGGTTCCAGCACAGAGAGCAACCGATAATCTGCGACGTCTGCGGCAAGACCTGCCGGAACAGCAACCTGCTCTATCTGCACCAGAAGTTCGCTCACTACAAGCCTGACTTCGAATGTCACATCTGCCATCGACGAATGGTCAGCCAAGCGAATCTTGACGACCACATACTCAAGCAGCATGAGCAGGTGGAGGAGTGCGTGTGCGAAGAGTGCGGCAAGACGTTCAGGAAGGCAGCTCGATTGAAGATCCACATGCGAGTGCACACTGGGGTCAAGCCGTACACCTGCAAGATCTGTACAAAATCGTTCGCCAGGAGAAACGGACTGAGACAGCATCTCTTAATACATACCGGCAAGCGACCGTATATTTGCGATATCTGTGGAAAAAGCTTCACGCAAAAAACTGGACTGATTTGTCATAGAAAGATGCACCCTGGAGATAAACCGCCGCTGCCGAGAGTCACCATCGACCACGTTCTTACGGATCTGCTGTAA
Protein Sequence: MLIKSDSAEAENVVVTSPTRKTVFIRKNSAETKSSPDQESSMTLYQVSIVNGKASYSLLPIKKVETKKASPKKKTNRQTDQKFTCDECDLKFTTVIRLKAHKSTHKPLNKLSKASRIRCREETVVTPMSRRKQYLKPYNVTEDEEIELKSKQAGKKDLTFFCPSCEFSTDNRNMMFNHFSVIHCMKPSDINIESDEQQTHCDEALVESIEDFEEVVKEEHPDQITLNCAQCGFTCSNQDDLDFHTCEPSEDCTSFSCHLCTYECLTRMGLQSHITRKHRPKPEKGASNEYECDECEFRSENKTSLYSHKRRHRSGKLNVSVKRSENKFFCNECDFAARTKSALYMHIQRRHKLIESKTERPEFYSCEHCDYTNKTKYEMKVHVIRKHTNEYPHECKDCGKKYKIKGDLTNHIRFQHREQPIICDVCGKTCGNSNSLYVHQKFAHYKAEFECPICHRRMVSQANLDEHVLKQHEQREDAVCEECGKTFTRQSRLKIHMRIHTGLKPHACKVCGKAFSRRTALRQHLLIHTGQRPYVCDICGKTFTQKPGLISHRKSHPGSHPPLPRVTIDHVLSDLLTEGDGPFSFIFRKKQLPIIRPISGKRLVFQKKLVKLSKPLMGKLFSVATPMVQVKIEPVEVPSTGDFEEVTIDGTSSISSVTPFTLEKKHDFVVYMCKSCKIYFPIRQMLEDHNTKIHAPQKKSPVKVVRRVVSQSEKIASPPKKRQKCVQISVSKPDKFPEEGKDRIYFSGYYKISTGDYICNNCGFSSRIRSTVASHAVRKHNALGFENVEKSTPPSASIEEVTKFEPVEEDDEGSWPVEVVEEIEEEEKYEEMDKTDPLAEKQGRSCPYCPFVSSIGSTYHSHIKRKHREQWLKSVAKRVADLKTTPSSVTNTAISQLTCSSCPFKSFKRSTMRSHVLRKHEKDPSNDDPEFADMQAQTEGKKVRKCPYCPFESWIYSTMNSHITRTHGDQPHPLKSKNKPRYNMQLFTGYACHYCSFAGATVMSIRSHSAREHTGMKQPLQQVPVQEFDCDQCDYKTQSRRHMQLHLKDCHTMLANTEGMFQCHACSYETQSRMGLQRHVSIKHSVLASMNIADSAYFKCDQCNYRTLNSKLMDWHKKQHSEENFGENDGNSYECNDCDFSTWTKNQLYQHIRRKHKDGETNEKEPELEPEQVYACGQCDYVSKNKHAMKTHVLRKHTDDYPHECNICEKKYKVKADLTNHIRFQHREQPIICDVCGKTCRNSNLLYLHQKFAHYKPDFECHICHRRMVSQANLDDHILKQHEQVEECVCEECGKTFRKAARLKIHMRVHTGVKPYTCKICTKSFARRNGLRQHLLIHTGKRPYICDICGKSFTQKTGLICHRKMHPGDKPPLPRVTIDHVLTDLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00286643;
90% Identity: -
80% Identity: -