Csem024579.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cecidostiba semifascia
Gene Symbol
ZNF217
Assembly
GCA_900474235.1
Location
UCQR01085894.1:82-6827[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 30 1.8e-05 0.0018 19.2 3.7 1 23 379 401 379 401 0.99
2 30 1.7e-06 0.00017 22.4 2.8 1 23 407 430 407 430 0.96
3 30 0.15 15 6.8 0.3 2 23 437 458 436 458 0.96
4 30 1.1e-05 0.0011 19.9 0.4 1 23 464 486 464 486 0.97
5 30 6.6e-05 0.0066 17.4 3.0 1 23 492 514 492 514 0.96
6 30 0.00016 0.016 16.2 1.4 1 23 520 542 520 542 0.98
7 30 0.067 6.7 7.9 6.9 1 23 548 571 548 571 0.96
8 30 9.3e-05 0.0094 16.9 0.2 1 23 662 684 662 684 0.99
9 30 3.1e-05 0.0031 18.4 0.8 2 23 691 713 690 713 0.94
10 30 0.0028 0.28 12.2 0.6 1 23 719 741 719 741 0.99
11 30 1.8e-05 0.0018 19.1 2.5 1 23 747 769 747 769 0.96
12 30 0.0006 0.061 14.3 2.5 1 23 775 797 775 797 0.97
13 30 0.00021 0.021 15.8 0.9 3 23 805 825 803 825 0.97
14 30 0.0025 0.25 12.4 3.4 1 21 831 851 831 852 0.93
15 30 2.4 2.4e+02 3.0 0.9 1 23 924 947 924 947 0.94
16 30 0.003 0.31 12.1 0.2 3 23 961 981 959 981 0.97
17 30 0.0054 0.54 11.3 2.7 1 23 1009 1031 1009 1031 0.99
18 30 0.00015 0.015 16.2 0.1 3 23 1039 1060 1037 1060 0.91
19 30 0.036 3.6 8.8 0.2 1 23 1066 1088 1066 1088 0.98
20 30 6.6e-05 0.0067 17.3 0.8 1 23 1094 1116 1094 1116 0.98
21 30 4.8e-05 0.0049 17.8 0.5 1 23 1122 1144 1122 1144 0.97
22 30 0.0012 0.12 13.4 0.1 1 23 1150 1172 1150 1172 0.97
23 30 0.00026 0.027 15.5 2.1 1 23 1178 1200 1178 1201 0.93
24 30 0.00026 0.026 15.5 4.6 2 23 1346 1367 1345 1367 0.97
25 30 0.00083 0.083 13.9 3.6 1 23 1373 1396 1373 1396 0.96
26 30 0.00031 0.032 15.2 1.6 1 23 1402 1424 1402 1424 0.96
27 30 1.4e-05 0.0014 19.5 0.8 1 23 1430 1452 1430 1452 0.98
28 30 0.15 15 6.8 2.9 1 23 1458 1480 1458 1480 0.96
29 30 5.4e-06 0.00054 20.8 1.0 1 23 1486 1508 1486 1508 0.97
30 30 0.0001 0.01 16.8 2.5 1 23 1514 1537 1514 1537 0.98

Sequence Information

Coding Sequence
ATGGAGGAGGTTTCAAGCAACATGGAGGTTGTTATAAAAAGTGTTCACAGTAAGGGGATATTAATAAGGGATGGAGAGGAGATGACCGATAAGGAAGAGGATATGAAAACGACAGAGTACTTCTTAGAAGTTGAAGATCAAGGTGACGGAGATGAAGTTGACGACACACAGTTTGTGACTGTGCAAAGCGAACAAGATGGATCACAGTTTGTGGCGGTGGATGCTGATTCTGGCCAATTGTTAATACCGGATAAGGAAGTTATACTGTGGAATGAGATCTGCAGAGTTTGTGCCAACAGTGGAAGTGATAAAGAGTTTATTCCAATATTCTCTGGAGAGGGAATCGAGCACGATCTGAGCAGCAAAATTCATAGCTATCTGCCTGTGAggGTTTCTGAAAATGATACCCTTCCTCTTCAAGTATGTTACAATTGCGCAGCGACAATGATAGCGTGGGATGAGATATTTAAGGGATGTATGGATGCTCAGCAGCGACTTCTAGAATTACAAAGtaaattaaactttaaagaacagTATTATAATGATTCACCGgttgaagaagaaaacatgGGAACAGTATTAGAAGTTGAAACTACTAACCACGAGGAACCTCAGGTGCAAATCAAAGAAGTAGAGTCTTTGGAAACCCTGCAGATTGTTGAACCTAACAGGTCCGGACGTTCACAGACACCAAAAACAgataaatcatcaaaatctGATATCAATGAAAGTGAATGTTTGACTGTGGTGACAGTAACACAGAATCTTGAAAAACCAATTTCAAAGGAACCTTTTAAGGAAGTGAATTCTCTAGTGAACGAAAACGTCGATGCTAGTGAAAAAGAATCTCGAATCAGTACGAACGTACTGGATCAGCTTGAGATAAGCACTTCAAAAGAAACGGATGAAACCAGCGATCTTACGAAAAACACAGAATTGCCCGAAGAAGAAATCGCAACAACAATCGCTAACGGAACAGATCTAGAGCTCGAAGAGTCTGAAAACCTCGGAGACGAACCTTGGATGAATGAATCCATAGACCAAAGTTCAGAAGGCTCCGACGTCGATGCTCCCGAAAAAGCATCCTCCGAGACCGACAAGAAACTCAAGATTAAAAAACGAATGCCGGTGTCGTACACTTGCGACAAATGCGATAAAATCTTCAAGTTCAAGGATACGTTTTCCCGTCACCGGCGCATCCACTCCGACGAGCGTCCATTTACCTGTCACATTTGCGGAAAGAGGTTCCGCGACTCTGGTGGACTGTGCCGCCACGTTCGGGATGTTCACGCCAAGGTGAAGAAGTGGCCGTGCAGCAGGTGCGCCCGGAGTTTTGCATCGAAGGCAACACGTGACGACCACGAACGTACTCATACGGGTGAGCGACCCTACATCTGTGACAGCTGCGGCAAGAGTTTCAAGACCAAGGCCTCGCTCTACATTCATGCCAAGATACACACTGATCTATTCCCTCATGCCTGCGTGCACTGCGACAAGAGTTTCCGAAGGAGGCAGGAGCTGCTGGCGCATGTGACGACTCACACGGGCGAGAAGAACTTCGAGTGCGATGTTTGCTTCAAGAGCTTCAGGATAAAAATGGAGCTGAGAAGGCACACACTCAGCCACTCGAATGACAAGCCGTTCGTCTGCGATCTGTGCGACTTCAAATGCAAGCAGAAGCGGTATCTCAACAATCACGTGAAGCACAAGCACAGCTTGATCGAGAAAACACCGAACGAAGGAACCAGCACATGCTTGAATCTCGAAGATGGCGGAGTCATCACCATCCTCACGACAGAGCCGACGATGATGTCAGGAACCGAAATCGACGCCACGACGATTGTATCCCCTCGTCGTCGAAAGCGCAGCAAGAGGGATCCCTTAGACCTCGACGGCTCAAAGAAGTCCAAATCCGTCAACCGCACCGGCCAACGCCGGCAGGAGATCATCCAAGCCAAGGTAATCGTCGATGGCAACATCTACTACAAGTGCGAAGAGTGTCCCAAGCTTCTGTCCACTCCATACAACTACATCGCGCACAAGCGCGTGCACACGCACGAGCGGCCGTGCACCTGCGATATCTGTGGCAAGAGCTTCACGGCGGGATCTTCGTTAAACCGACACGTGCGCGACGTTCACCAAAAGATCAAGGACTACAAATGCGACTACTGTGACCGCAGGCTCGCGTCGAAGGTCGCCCGGGACGAGCATCAGCGCACTCACACGGATGAGCGGCCCCACATCTGTGAGACCTGTGGCAAGAGCTTCCGACAGCGAGCATCGCTCTCGGTGCATAGAAGGTTCCACTCCAAGAGCTTTCTGTTCAACTGCAAGCTCTGTCACAGAGGATTCCCCAGGAAGCAGGACATGGAGAGGCATGAGTTGACTCATACCGACCAGAAACCCTACGGCTGCAAGCTTTGCGATAAAACTTTCAGGAGCTCGGCCTCGGCCATAAGGCATCGGTCGACTCACGATAACGATAATAAACACATCTGCGATATGTGCGGCGAGTGTTTTAATCAGGAGAGATATCTTAAGAATCACAAAAAGAAAGGCAATCCCAATATCTTTCATTACAGACAAGCCAGCAGCAAAGTAAACAGAAAACTCTCCACGAAAGTAAAGCAAGAGAAGCCTCTACCTAGCATTCACCCAGCTAAACAGTTTACCAAGTCTTCGGGACCCGTGGATCCACTGAAAATCGAGGAACCGTTAAAAATCAGTGATCCAGTAAAACAGGAGCAGAAAAATAGCGAGAAGTTCATGTACATGTGCGGAGTCTGCGAGAAGCTCTGCGAAGAAGAGGACGAGCTGATGTGCCACATGCGTGATGCTCACGAGGAGAACAAGTCTCAGCTTGGTTCGGTGCGCTACGGGTGCAACATGTGTGATCGCTCGTACCCGCTCAAAATCAGCCTTATTAAACATCTGGCCAGACATAGACGCACCACCCATATGCCCGGTGAGGAAAAACTCCTCGCCAAGTCCAAGATCCGTTCGAACCGAGTCTATGGATCCATGTACAAATGCGACACTTGTCAGAAGGTTTTATCCAACCGAAAGGCATGCCTGCGCCACATCCGAGTTCACAACAACGAGAGGCCTATTATCTGCGAGGAATGCGGCAAGTCCTACCGCATAGAGGAAGACCTAAAACGACACATGGACGATGTGCATAGGAAGATCAAAAGGTATCCCTGTGACCTGTGCGAAAAGTTTTTCGCGGCAAAGGGAACTAGAGACGCGCATAGGAGGATTCATACCGGGGAGAAGCCATTTCAATGCAAGGAATGCGGCAAGTTCTTCAGGTCAGTCAACCTGCTAGGGATACACAAGAGGATACACACTGACTATCGACCCTACAAGTGCAATACTTGCGAGAAGGCCTTCCGATCGAGGCAGAAGCTCGAGGCGCACGAGGCTATTCACACGGGTATCAGACCGTATCCATGCGACGTATGCAATAAAATGTTCGCGGCTAAAGGAGAGGCAACCAGGCACCGGTCCGTGCACTTTAAAGACAAACCGTTTCTCTGCTCGGAGTGCGGACTCGCTTTCAGACTAAACAGGTATCTGAAGACGCATATCAAGTCGCACCACAAGGATAAAATTGAGATTTTGCTGAAATCTAATAAGGAACTTCAACGAACTTGCGCCAGCTTCAAAGAGTTTCAAAAGGTCTACAAACATACCCTTCCAGCTTCCAAAGTTAGAAGGAAATCTCAGTTACCATCGAAATCAGCGAAGAAACGAGCGAGCcgtacaataaaaaagaaaccattaaaaaaaatgtccaagATAGAACCGGAAAACGATTGCGCGGctctaaaagaagaagaagctctgGAAGACTCCGAAAGCTCGGTCTTCGCGGACGTCCAGCTTGAATCCCCACATTCCGACGGCGTCGATGACCACGACGCCAACGATCCAGACTTCGAGCTGACACCTGACATCTCACCgaacaaaacgaaaaagtcGCGACGAAAGCTCAGCGCGGAAAATTCTGCCGTTGCAAACGTTGGCAATCTCGAGTGCACTCATTGCAACAAGAAATTCCGCATGTACAACAGCTACCAAATCCACATGAGGAGACACACAGGGGAGAAGCCCTACACTTGTCACATCTGTGGCAAACAATTCGGTCAAACAGGTAGTTTGTATTATCACTTGAAGCACGTCCACGGTGGCGTCAAGAATCATGCCTGCGATATCTGTGGTCGATGTTTCGCTATGAAGACAGCCATGGAGGACCACCGCAGGATCCATACTGGCGAACGGCCTTACGTCTGCGATTCCTGCGGCAAAACCTTCAAAACTAAAGCCTCGCTCTACATTCATAGTAAGATTCATACGAACGAGTATCCGTTTAAATGTAGTTACTGCAAGAAGCTCTTTCGATGGAAACAACAGATGATAAGTCACGAGACGACACACACGGGGGAGAAGAATCACATTTGTGATATTTGCGGAAAAGGTTTTGGAGTAAAGAACGAGCTGACTAGGCACCGGAGGACCCATTCGTTGGATAAGCCGTTTACTTGCCAGAAGTGCGGTGTCAGCTTTGGACAGAAAAGATACCTGACTAATCACAATCGAACGCGACACAAGACGAAGGTCGCTGACAATTCTTAA
Protein Sequence
MEEVSSNMEVVIKSVHSKGILIRDGEEMTDKEEDMKTTEYFLEVEDQGDGDEVDDTQFVTVQSEQDGSQFVAVDADSGQLLIPDKEVILWNEICRVCANSGSDKEFIPIFSGEGIEHDLSSKIHSYLPVRVSENDTLPLQVCYNCAATMIAWDEIFKGCMDAQQRLLELQSKLNFKEQYYNDSPVEEENMGTVLEVETTNHEEPQVQIKEVESLETLQIVEPNRSGRSQTPKTDKSSKSDINESECLTVVTVTQNLEKPISKEPFKEVNSLVNENVDASEKESRISTNVLDQLEISTSKETDETSDLTKNTELPEEEIATTIANGTDLELEESENLGDEPWMNESIDQSSEGSDVDAPEKASSETDKKLKIKKRMPVSYTCDKCDKIFKFKDTFSRHRRIHSDERPFTCHICGKRFRDSGGLCRHVRDVHAKVKKWPCSRCARSFASKATRDDHERTHTGERPYICDSCGKSFKTKASLYIHAKIHTDLFPHACVHCDKSFRRRQELLAHVTTHTGEKNFECDVCFKSFRIKMELRRHTLSHSNDKPFVCDLCDFKCKQKRYLNNHVKHKHSLIEKTPNEGTSTCLNLEDGGVITILTTEPTMMSGTEIDATTIVSPRRRKRSKRDPLDLDGSKKSKSVNRTGQRRQEIIQAKVIVDGNIYYKCEECPKLLSTPYNYIAHKRVHTHERPCTCDICGKSFTAGSSLNRHVRDVHQKIKDYKCDYCDRRLASKVARDEHQRTHTDERPHICETCGKSFRQRASLSVHRRFHSKSFLFNCKLCHRGFPRKQDMERHELTHTDQKPYGCKLCDKTFRSSASAIRHRSTHDNDNKHICDMCGECFNQERYLKNHKKKGNPNIFHYRQASSKVNRKLSTKVKQEKPLPSIHPAKQFTKSSGPVDPLKIEEPLKISDPVKQEQKNSEKFMYMCGVCEKLCEEEDELMCHMRDAHEENKSQLGSVRYGCNMCDRSYPLKISLIKHLARHRRTTHMPGEEKLLAKSKIRSNRVYGSMYKCDTCQKVLSNRKACLRHIRVHNNERPIICEECGKSYRIEEDLKRHMDDVHRKIKRYPCDLCEKFFAAKGTRDAHRRIHTGEKPFQCKECGKFFRSVNLLGIHKRIHTDYRPYKCNTCEKAFRSRQKLEAHEAIHTGIRPYPCDVCNKMFAAKGEATRHRSVHFKDKPFLCSECGLAFRLNRYLKTHIKSHHKDKIEILLKSNKELQRTCASFKEFQKVYKHTLPASKVRRKSQLPSKSAKKRASRTIKKKPLKKMSKIEPENDCAALKEEEALEDSESSVFADVQLESPHSDGVDDHDANDPDFELTPDISPNKTKKSRRKLSAENSAVANVGNLECTHCNKKFRMYNSYQIHMRRHTGEKPYTCHICGKQFGQTGSLYYHLKHVHGGVKNHACDICGRCFAMKTAMEDHRRIHTGERPYVCDSCGKTFKTKASLYIHSKIHTNEYPFKCSYCKKLFRWKQQMISHETTHTGEKNHICDICGKGFGVKNELTRHRRTHSLDKPFTCQKCGVSFGQKRYLTNHNRTRHKTKVADNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-